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Scopus Author ID: 57211287568

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Works (33)

Outbreak of Rotavirus Diarrheal Infection Among Adults in King County, Washington, January–June 2023

The Journal of Infectious Diseases
2025-01-08 | Journal article
DOI: 10.1093/infdis/jiaf013
Contributors: Jimmy Ma; Raaka G Kumbhakar; Amanda Casto; Eric J Chow; Janet A Englund; Rashi Gautam; Jose Jaimes; Jacqueline E Tate; Sarah Smart; Nandita S Mani et al.
Source: check_circle
Crossref

SARS-CoV-2 Diversity and Transmission on a University Campus across Two Academic Years during the Pandemic

Clinical Chemistry
2025-01-03 | Journal article
DOI: 10.1093/clinchem/hvae194
Contributors: Amanda M Casto; Miguel I Paredes; Julia C Bennett; Kyle G Luiten; Peter D Han; Luis S Gamboa; Evan McDermot; Geoffrey S Gottlieb; Zachary Acker; Natalie K Lo et al.
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Crossref

Viral Genomic Variation and the Severity of Genital Herpes Simplex Virus-2 Infection as Quantified by Shedding Rate: A Viral Genome-Wide Association Study

The Journal of Infectious Diseases
2024-12-16 | Journal article
DOI: 10.1093/infdis/jiae283
Contributors: Amanda M Casto; Hoseung Song; Hong Xie; Stacy Selke; Pavitra Roychoudhury; Michael C Wu; Anna Wald; Alexander L Greninger; Christine Johnston
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Crossref

SARS-CoV-2 diversity and transmission on a university campus across two academic years during the pandemic

2024-03-02 | Preprint
DOI: 10.1101/2024.02.29.24303285
Contributors: Amanda M Casto; Miguel I Paredes; Julia Catherine Bennett; Kyle G Luiten; Jessica A. O'Hanlon; Peter D. Han; Luis Gamboa; Evan McDermot; Melissa Truong; Geoffrey S Gottlieb et al.
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Crossref

The Clinical and Genomic Epidemiology of Rhinovirus in Homeless Shelters—King County, Washington

The Journal of Infectious Diseases
2022-10-07 | Journal article
DOI: 10.1093/infdis/jiac239
Contributors: Eric J Chow; Amanda M Casto; Pavitra Roychoudhury; Peter D Han; Hong Xie; Brian Pfau; Tien V Nguyen; Jaydee Sereewit; Julia H Rogers; Sarah N Cox et al.
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Crossref

Human Parainfluenza Virus in Homeless Shelters before and during the COVID-19 Pandemic, Washington, USA.

Emerging infectious diseases
2022-09-23 | Journal article
DOI: 10.3201/eid2811.221156
PMID: 36150508
PMC: PMC9622239
Contributors: Amanda Casto; Eric J. Chow; Casto AM; Sampoleo R; Mills MG; Han PD; Xie H; Pfau B; Nguyen TV; Sereewit J et al.
Source: Self-asserted source
Amanda Casto

Genomic surveillance of SARS-CoV-2 Omicron variants on a university campus

Nature Communications
2022-09-06 | Journal article
DOI: 10.1038/s41467-022-32786-z
Contributors: Ana A. Weil; Kyle G. Luiten; Amanda M. Casto; Julia C. Bennett; Jessica O’Hanlon; Peter D. Han; Luis S. Gamboa; Evan McDermot; Melissa Truong; Geoffrey S. Gottlieb et al.
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Crossref

Phylogenomics of Severe Acute Respiratory Syndrome Coronavirus 2 in Emergency Shelters for People Experiencing Homelessness

The Journal of Infectious Diseases
2022-08-24 | Journal article
DOI: 10.1093/infdis/jiac021
Contributors: Amanda M Casto; Julia H Rogers; Amy C Link; Michael Boeckh; Michael L Jackson; Timothy M Uyeki; Janet A Englund; Lea M Starita; Helen Y Chu
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Crossref

The clinical and genomic epidemiology of seasonal human coronaviruses in congregate homeless shelter settings: A repeated cross-sectional study.

Lancet Regional Health. Americas
2022-08-18 | Journal article
DOI: 10.1016/j.lana.2022.100348
PMID: 35996440
PMC: PMC9387177
Contributors: Amanda Casto; Eric J. Chow; Casto AM; Rogers JH; Roychoudhury P; Han PD; Xie H; Mills MG; Nguyen TV; Pfau B et al.
Source: Self-asserted source
Amanda Casto

Host-pathogen dynamics in longitudinal clinical specimens from patients with COVID-19.

Scientific reports
2022-04-07 | Journal article
DOI: 10.1038/s41598-022-09752-2
PMID: 35393464
PMC: PMC8987511
Contributors: Amanda Casto; Michelle Jade Lin; Rachleff VM; Xie H; Shrestha L; Lieberman NAP; Peddu V; Addetia A; Casto AM; Breit N et al.
Source: Self-asserted source
Amanda Casto

Treponema pallidum genome sequencing from six continents reveals variability in vaccine candidate genes and dominance of Nichols clade strains in Madagascar.

PLoS neglected tropical diseases
2021-12-22 | Journal article | Author
DOI: 10.1371/journal.pntd.0010063
PMID: 34936652
PMC: PMC8735616
Contributors: Nicole Lieberman; Michelle Jade Lin; hong xie; Shrestha L; Nguyen T; Huang ML; Austin Haynes; Emily Romeis; Wang QQ; Zhang RL et al.
Source: Self-asserted source
Amanda Casto

Diagnosis of infectious diseases in immunocompromised hosts using metagenomic next generation sequencing-based diagnostics.

Blood reviews
2021-11-06 | Journal article
DOI: 10.1016/j.blre.2021.100906
PMID: 34802773
Contributors: Amanda Casto; Casto AM; Fredricks DN; Hill JA
Source: Self-asserted source
Amanda Casto

Genetic variants associated with cytomegalovirus infection after allogeneic hematopoietic cell transplantation.

Blood
2021-10-01 | Journal article | Author
DOI: 10.1182/blood.2021012153
PMID: 34269803
Contributors: Amanda Casto; Sachiko Seo; David Levine; Storer BE; Dong X; Hansen JA; Boeckh M; Paul J Martin
Source: Self-asserted source
Amanda Casto
grade
Preferred source (of 2)‎

Evaluating Specimen Quality and Results from a Community-Wide, Home-Based Respiratory Surveillance Study.

Journal of clinical microbiology
2021-04-20 | Journal article
DOI: 10.1128/jcm.02934-20
PMID: 33563599
PMC: PMC8091861
Contributors: Amanda Casto; Ashley Kim; Elisabeth Brandstetter Figueroa; Wilcox N; Heimonen J; Graham C; Han PD; Lea Starita; McCulloch DJ; Casto AM et al.
Source: Self-asserted source
Amanda Casto

SARS-CoV-2 Epidemiology on a Public University Campus in Washington State

2021-03-17 | Other
DOI: 10.1101/2021.03.15.21253227
Contributors: Ana A. Weil; Sarah L. Sohlberg; Jessica A. O’Hanlon; Amanda M. Casto; Anne W Emanuels; Natalie K. Lo; Emily P. Greismer; Ariana M. Magedson; Naomi C. Wilcox; Ashley E. Kim et al.
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Crossref

Dynamics of Neutralizing Antibody Titers in the Months After Severe Acute Respiratory Syndrome Coronavirus 2 Infection.

The Journal of infectious diseases
2021-02-01 | Journal article
DOI: 10.1093/infdis/jiaa618
PMID: 33535236
PMC: PMC7543487
Contributors: Amanda Casto; Crawford KHD; Dingens AS; Eguia R; Wolf CR; Wilcox N; Jennifer Logue; Shuey K; Casto AM; Fiala B et al.
Source: Self-asserted source
Amanda Casto

Herpes Simplex Virus Mistyping due to HSV-1 × HSV-2 Interspecies Recombination in Viral Gene Encoding Glycoprotein B

Viruses
2020-08-06 | Journal article
DOI: 10.3390/v12080860
Contributors: Amanda M. Casto; Meei-Li W. Huang; Hong Xie; Keith R. Jerome; Anna Wald; Christine M. Johnston; Alexander L. Greninger
Source: check_circle
Crossref

Evaluation of Genotypic Antiviral Resistance Testing as an Alternative to Phenotypic Testing in a Patient with DOCK8 Deficiency and Severe HSV-1 Disease

The Journal of Infectious Diseases
2020-06-11 | Journal article
DOI: 10.1093/infdis/jiaa020
Contributors: Amanda M Casto; Sean C Stout; Rangaraj Selvarangan; Alexandra F Freeman; Brandon D Newell; Erin D Stahl; Atif A Ahmed; Alexander L Greninger; Dwight E Yin
Source: check_circle
Crossref

Comparative Performance of SARS-CoV-2 Detection Assays Using Seven Different Primer-Probe Sets and One Assay Kit.

Journal of clinical microbiology
2020-05-26 | Journal article
DOI: 10.1128/jcm.00557-20
PMID: 32269100
PMC: PMC7269385
Contributors: Amanda Casto; Nalla AK; Casto AM; Huang MW; Garrett Perchetti; Sampoleo R; Shrestha L; Wei Y; Zhu H; Jerome KR et al.
Source: Self-asserted source
Amanda Casto

High-resolution profiling of human cytomegalovirus cell-free DNA in human plasma highlights its exceptionally fragmented nature.

Scientific reports
2020-02-28 | Journal article
DOI: 10.1038/s41598-020-60655-6
PMID: 32111931
PMC: PMC7048871
Contributors: Amanda Casto; Vikas Peddu; Bradley BT; Casto AM; Raj Shree; Colbert BG; Xie H; Santo TK; Huang ML; Cheng EY et al.
Source: Self-asserted source
Amanda Casto

Prospective, real-time metagenomic sequencing during norovirus outbreak reveals discrete transmission clusters

Clinical Infectious Diseases
2019 | Journal article
DOI: 10.1093/cid/ciy1020
EID:

2-s2.0-85072011020
Contributors: Casto, A.M.; Adler, A.L.; Makhsous, N.; Crawford, K.; Qin, X.; Kuypers, J.M.; Huang, M.-L.; Zerr, D.M.; Greninger, A.L.
Source: Self-asserted source
Amanda Casto via Scopus - Elsevier

Large, Stable, Contemporary Interspecies Recombination Events in Circulating Human Herpes Simplex Viruses

The Journal of Infectious Diseases
2019-04-23 | Journal article
DOI: 10.1093/infdis/jiz199
Contributors: Amanda M Casto; Pavitra Roychoudhury; Hong Xie; Stacy Selke; Garrett A Perchetti; Haley Wofford; Meei-Li Huang; Georges M G M Verjans; Geoffrey S Gottlieb; Anna Wald et al.
Source: check_circle
Crossref

Notes from the field: Baylisascaris procyonis encephalomyelitis in a toddler — King county, Washington, 2017

Morbidity and Mortality Weekly Report
2018 | Journal article
DOI: 10.15585/mmwr.mm6702a6
EID:

2-s2.0-85041102549
Contributors: Kawakami, V.; Casto, A.; Natarajan, N.; Snyder, A.; Mosser, J.; Bonwitt, J.; Kronman, M.P.; Kay, M.
Source: Self-asserted source
Amanda Casto via Scopus - Elsevier

Ultrasensitive Capture of Human Herpes Simplex Virus Genomes Directly from Clinical Samples Reveals Extraordinarily Limited Evolution in Cell Culture

mSphere
2018 | Journal article
DOI: 10.1128/mSphereDirect.00283-18
EID:

2-s2.0-85055151119
Contributors: Greninger, A.L.; Roychoudhury, P.; Xie, H.; Casto, A.; Cent, A.; Pepper, G.; Koelle, D.M.; Huang, M.-L.; Wald, A.; Johnston, C. et al.
Source: Self-asserted source
Amanda Casto via Scopus - Elsevier

Diffuse alveolar damage in a patient receiving dronedarone

Chest
2015 | Journal article
DOI: 10.1378/chest.14-1849
EID:

2-s2.0-84927126184
Contributors: Stack, S.; Nguyen, D.-V.; Casto, A.; Ahuja, N.
Source: Self-asserted source
Amanda Casto via Scopus - Elsevier

A tale of two haplotypes: The EDA2R/AR intergenic region is the most divergent genomic segment between Africans and East Asians in the human genome

Human Biology
2013 | Journal article
DOI: 10.3378/027.084.0604
EID:

2-s2.0-84995268968
Contributors: Casto, A.M.; Henn, B.M.; Kidd, J.M.; Bustamante, C.D.; Feldman, M.W.
Source: Self-asserted source
Amanda Casto via Scopus - Elsevier

The Role of Selection in Shaping Diversity of Natural M. tuberculosis Populations

PLoS Pathogens
2013 | Journal article
DOI: 10.1371/journal.ppat.1003543
EID:

2-s2.0-84883341353
Contributors: Pepperell, C.S.; Casto, A.M.; Kitchen, A.; Granka, J.M.; Cornejo, O.E.; Holmes, E.C.; Birren, B.; Galagan, J.; Feldman, M.W.
Source: Self-asserted source
Amanda Casto via Scopus - Elsevier

Altitude sickness in climbers and efficacy of NSAIDs trial (ASCENT): Randomized, controlled trial of ibuprofen versus placebo for prevention of altitude illness

Wilderness and Environmental Medicine
2012 | Journal article
DOI: 10.1016/j.wem.2012.08.001
EID:

2-s2.0-84869496350
Contributors: Gertsch, J.H.; Corbett, B.; Holck, P.S.; Mulcahy, A.; Watts, M.; Stillwagon, N.T.; Casto, A.M.; Abramson, C.H.; Vaughan, C.P.A.; MacGuire, C. et al.
Source: Self-asserted source
Amanda Casto via Scopus - Elsevier

Genome-wide association study SNPS in the human genome diversity project populations: Does selection affect unlinked SNPS with shared trait associations?

PLoS Genetics
2011 | Journal article
DOI: 10.1371/journal.pgen.1001266
EID:

2-s2.0-79851478724
Contributors: Casto, A.M.; Feldman, M.W.
Source: Self-asserted source
Amanda Casto via Scopus - Elsevier

Beyond the Genome: genomics research ten years after the human genome sequence.

Genome biology
2010 | Journal article
EID:

2-s2.0-79958243715
Contributors: Casto, A.M.; Amid, C.
Source: Self-asserted source
Amanda Casto via Scopus - Elsevier

Characterization of X-Linked SNP genotypic variation in globally-distributed human populations

Genome Biology
2010 | Journal article
DOI: 10.1186/gb-2010-11-1-r10
EID:

2-s2.0-77349108598
Contributors: Casto, A.M.; Li, J.Z.; Absher, D.; Myers, R.; Ramachandran, S.; Feldman, M.W.
Source: Self-asserted source
Amanda Casto via Scopus - Elsevier

Worldwide human relationships inferred from genome-wide patterns of variation

Science
2008 | Journal article
DOI: 10.1126/science.1153717
EID:

2-s2.0-39749181521
Contributors: Li, J.Z.; Absher, D.M.; Tang, H.; Southwick, A.M.; Casto, A.M.; Ramachandran, S.; Cann, H.M.; Barsh, G.S.; Feldman, M.; Cavalli-Sforza, L.L. et al.
Source: Self-asserted source
Amanda Casto via Scopus - Elsevier

Melanesian and Asian origins of Polynesians: mtDNA and Y chromosome gradients across the Pacific

Molecular Biology and Evolution
2006 | Journal article
DOI: 10.1093/molbev/msl093
EID:

2-s2.0-33749648812
Contributors: Kayser, M.; Brauer, S.; Cordaux, R.; Casto, A.; Lao, O.; Zhivotovsky, L.A.; Moyse-Faurie, C.; Rutledge, R.B.; Schiefenhoevel, W.; Gil, D. et al.
Source: Self-asserted source
Amanda Casto via Scopus - Elsevier

Peer review (6 reviews for 4 publications/grants)

Review activity for Journal of fungi. (1)
Review activity for Journal of infectious diseases. (3)
Review activity for Nature communications (1)
Review activity for Open forum infectious diseases. (1)
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