Personal information

No personal information available

Activities

Collapse all

Works (13)

Support for the deuterostome clade comes from systematic errors

2025-01-16 | Preprint
DOI: 10.1101/2025.01.13.632777
Contributors: Ana Serra Silva; Paschalis Natsidis; Laura Piovani; Paschalia Kapli; Maximilian J. Telford
Source: check_circle
Crossref

DNA Sequences Are as Useful as Protein Sequences for Inferring Deep Phylogenies

Systematic Biology
2023-11-01 | Journal article
DOI: 10.1093/sysbio/syad036
Contributors: Paschalia Kapli; Ioanna Kotari; Maximilian J Telford; Nick Goldman; Ziheng Yang; Lars Jermiin
Source: check_circle
Crossref

Beginner's Guide on the Use of PAML to Detect Positive Selection

Molecular Biology and Evolution
2023-04-04 | Journal article
DOI: 10.1093/molbev/msad041
Contributors: Sandra Álvarez-Carretero; Paschalia Kapli; Ziheng Yang; Keith Crandall
Source: check_circle
Crossref

A near-complete species-level phylogeny of uropeltid snakes harnessing historical museum collections as a DNA source

Molecular Phylogenetics and Evolution
2023-01 | Journal article
DOI: 10.1016/j.ympev.2022.107651
Contributors: Filipa L. Sampaio; Julia J. Day; L.J. Mendis Wickramasinghe; Vivek P. Cyriac; Anna Papadopoulou; Selina Brace; Albert Rajendran; Cornelia Simon-Nutbrown; Tomas Flouris; Paschalia Kapli et al.
Source: check_circle
Crossref

Bayesian Phylogenetic Inference using Relaxed-clocks and the Multispecies Coalescent

Molecular Biology and Evolution
2022-08-03 | Journal article
DOI: 10.1093/molbev/msac161
Contributors: Tomáš Flouri; Jun Huang; Xiyun Jiao; Paschalia Kapli; Bruce Rannala; Ziheng Yang; Rasmus Nielsen
Source: check_circle
Crossref

SPART, a versatile and standardized data exchange format for species partition information

2021-03-22 | Preprint
DOI: 10.1101/2021.03.22.435428
Contributors: Aurélien Miralles; Jacques Ducasse; Sophie Brouillet; Tomas Flouri; Tomochika Fujisawa; Paschalia Kapli; L. Lacey Knowles; Sangeeta Kumari; Alexandros Stamatakis; Jeet Sukumaran et al.
Source: check_circle
Crossref

Lack of support for Deuterostomia prompts reinterpretation of the first Bilateria

Science Advances
2021-03-19 | Journal article
DOI: 10.1126/sciadv.abe2741
Contributors: Paschalia Kapli; Paschalis Natsidis; Daniel J. Leite; Maximilian Fursman; Nadia Jeffrie; Imran A. Rahman; Hervé Philippe; Richard R. Copley; Maximilian J. Telford
Source: check_circle
Crossref

Systematic errors in orthology inference and their effects on evolutionary analyses

iScience
2021-02 | Journal article
DOI: 10.1016/j.isci.2021.102110
Contributors: Paschalis Natsidis; Paschalia Kapli; Philipp H. Schiffer; Maximilian J. Telford
Source: check_circle
Crossref

Topology-dependent asymmetry in systematic errors affects phylogenetic placement of Ctenophora and Xenacoelomorpha

Science Advances
2020-12-11 | Journal article
DOI: 10.1126/sciadv.abc5162
Contributors: Paschalia Kapli; Maximilian J. Telford
Source: check_circle
Crossref

Systematic errors in orthology inference: a bug or a feature for evolutionary analyses?

2020-11-05 | Preprint
DOI: 10.1101/2020.11.03.366625
Contributors: Paschalis Natsidis; Paschalia Kapli; Philipp H Schiffer; Maximilian J. Telford
Source: check_circle
Crossref

Phylogenetic tree building in the genomic age

Nature Reviews Genetics
2020-07-18 | Journal article
DOI: 10.1038/s41576-020-0233-0
Contributors: Paschalia Kapli; Ziheng Yang; Maximilian J. Telford
Source: check_circle
Crossref

Lack of support for Deuterostomia prompts reinterpretation of the first Bilateria

2020-07-02 | Preprint
DOI: 10.1101/2020.07.01.182915
Contributors: Paschalia Kapli; Paschalis Natsidis; Daniel J. Leite; Maximilian Fursman; Nadia Jeffrie; Imran A. Rahman; Hervé Philippe; Richard R. Copley; Maximilian J. Telford
Source: check_circle
Crossref

Multi-rate Poisson Tree Processes for single-locus species delimitation under Maximum Likelihood and Markov Chain Monte Carlo

2016-07-14 | Preprint
DOI: 10.1101/063875
Contributors: P. Kapli; S. Lutteropp; J. Zhang; K. Kobert; P. Pavlidis; A. Stamatakis; T. Flouri
Source: check_circle
Crossref

Peer review (3 reviews for 2 publications/grants)

Review activity for BMC biology. (1)
Review activity for Nature communications (2)
How many people are using ORCID?