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Scopus Author ID: 57205399184

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Funding (1)

Investigating the effects of immunosuppression on carcinogenesis at single-cell spatiotemporal resolution

2025-01-01 to 2026-12-31 | Grant
American Cancer Society (Atlanta, US)
GRANT_NUMBER:

DBG-24-1322161-01-IBCD
Source: check_circle
ProposalCentral

Works (26)

Analysis of Race in Time to Keratinocyte Carcinoma in Solid Organ Transplant Recipients: Results of a Single-Institution Study.

Journal of the American Academy of Dermatology
2025-03 | Journal article
DOI: 10.1016/j.jaad.2025.02.085
Contributors: Isabel Silva; Abiha Kazmi; M. Grace Hren; Andrew L. Ji
Source: check_circle
Crossref

IL-33 potentiates histaminergic itch

Journal of Allergy and Clinical Immunology
2024 | Journal article
DOI: 10.1016/j.jaci.2023.08.038
EID:

2-s2.0-85180592826

Part of ISSN: 10976825 00916749
Contributors: Trier, A.M.; Ver Heul, A.M.; Fredman, A.; Le, V.; Wang, Z.; Auyeung, K.; Meixiong, J.; Lovato, P.; Holtzman, M.J.; Wang, F. et al.
Source: Self-asserted source
Andrew Ji via Scopus - Elsevier

In vivo CRISPRi screen identified lncRNA portfolio crucial for cutaneous squamous cell carcinoma tumor growth

bioRxiv
2024 | Other
DOI: 10.1101/2024.10.16.618774
EID:

2-s2.0-85210947095

Part of ISSN: 26928205
Contributors: Kim, G.; Siprashvili, Z.; Yang, X.; Meyers, J.M.; Ji, A.; Khavari, P.A.; Ducoli, L.
Source: Self-asserted source
Andrew Ji via Scopus - Elsevier

Type 1 innate lymphoid cells: a biomarker and therapeutic candidate in sarcoidosis

Journal of Clinical Investigation
2024 | Journal article
DOI: 10.1172/JCI183708
EID:

2-s2.0-85203113817

Part of ISSN: 15588238 00219738
Contributors: Cho, I.; Ji, A.L.
Source: Self-asserted source
Andrew Ji via Scopus - Elsevier

Algorithms in allergy: Diagnosis and management of atopic dermatitis in adulthood

Allergy
2024-12 | Journal article
DOI: 10.1111/all.16315
Contributors: M. Grace Hren; Ester Del Duca; Helen He; Andrew L. Ji; Emma Guttman‐Yassky
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Algorithms in allergy: Diagnosis and management of atopic dermatitis in adulthood

2024-07-21 | Preprint
DOI: 10.22541/au.172156966.65597061/v1
Contributors: M. Grace Hren; Ester Del Duca; Helen He; Andrew Ji; Emma Guttman-Yassky
Source: check_circle
Crossref

Single-Cell and Spatial Transcriptomic Analysis of Human Skin Delineates Intercellular Communication and Pathogenic Cells

Journal of Investigative Dermatology
2023 | Journal article
DOI: 10.1016/j.jid.2023.02.040
EID:

2-s2.0-85164505356

Part of ISSN: 15231747 0022202X
Contributors: Thrane, K.; Winge, M.C.G.; Wang, H.; Chen, L.; Guo, M.G.; Andersson, A.; Abalo, X.M.; Yang, X.; Kim, D.S.; Longo, S.K. et al.
Source: Self-asserted source
Andrew Ji via Scopus - Elsevier

STmut: a framework for visualizing somatic alterations in spatial transcriptomics data of cancer

Genome Biology
2023 | Journal article
DOI: 10.1186/s13059-023-03121-6
EID:

2-s2.0-85178211394

Part of ISSN: 1474760X 14747596
Contributors: Chen, L.; Chang, D.; Tandukar, B.; Deivendran, D.; Pozniak, J.; Cruz-Pacheco, N.; Cho, R.J.; Cheng, J.; Yeh, I.; Marine, C. et al.
Source: Self-asserted source
Andrew Ji via Scopus - Elsevier

The Use of Single-Cell RNA-Sequencing and Spatial Transcriptomics in Understanding the Pathogenesis and Treatment of Skin Diseases

JID Innovations
2023 | Journal article
DOI: 10.1016/j.xjidi.2023.100198
EID:

2-s2.0-85180864803

Part of ISSN: 26670267
Contributors: Houser, A.E.; Kazmi, A.; Nair, A.K.; Ji, A.L.
Source: Self-asserted source
Andrew Ji via Scopus - Elsevier
grade
Preferred source (of 2)‎

Glucose modulates transcription factor dimerization to enable tissue differentiation

bioRxiv
2022 | Other
DOI: 10.1101/2022.11.28.518222
EID:

2-s2.0-85146512610

Part of ISSN: 26928205
Contributors: Lopez-Pajares, V.; Bhaduri, A.; Zhao, Y.; Gowrishankar, G.; Donohue, L.; Guo, M.G.; Siprashvili, Z.; Miao, W.; Nguyen, D.T.; Li, A.M. et al.
Source: Self-asserted source
Andrew Ji via Scopus - Elsevier

Research Techniques Made Simple: Spatial Transcriptomics

Journal of Investigative Dermatology
2022 | Journal article
DOI: 10.1016/j.jid.2021.12.014
EID:

2-s2.0-85126098667

Part of ISSN: 15231747 0022202X
Contributors: Piñeiro, A.J.; Houser, A.E.; Ji, A.L.
Source: Self-asserted source
Andrew Ji via Scopus - Elsevier
grade
Preferred source (of 2)‎

Skin proteomic analysis of immune activation associated with regression of melanoma metastases induced by diphencyprone

JAAD International
2022 | Journal article
DOI: 10.1016/j.jdin.2022.08.006
EID:

2-s2.0-85138031527

Part of ISSN: 26663287
Contributors: Han, J.; Correa da Rosa, J.; Owji, S.; Yassky, D.; Luu, Y.; Estrada, Y.; Ungar, J.; Ji, A.; Krueger, J.G.; Gulati, N.
Source: Self-asserted source
Andrew Ji via Scopus - Elsevier
grade
Preferred source (of 2)‎

Spatially resolved clonal copy number alterations in benign and malignant tissue

Nature
2022 | Journal article
DOI: 10.1038/s41586-022-05023-2
EID:

2-s2.0-85135833407

Part of ISSN: 14764687 00280836
Contributors: Erickson, A.; He, M.; Berglund, E.; Marklund, M.; Mirzazadeh, R.; Schultz, N.; Kvastad, L.; Andersson, A.; Bergenstråhle, L.; Bergenstråhle, J. et al.
Source: Self-asserted source
Andrew Ji via Scopus - Elsevier

Super-resolved spatial transcriptomics by deep data fusion

Nature Biotechnology
2022 | Journal article
DOI: 10.1038/s41587-021-01075-3
EID:

2-s2.0-85120033599

Part of ISSN: 15461696 10870156
Contributors: Bergenstråhle, L.; He, B.; Bergenstråhle, J.; Abalo, X.; Mirzazadeh, R.; Thrane, K.; Ji, A.L.; Andersson, A.; Larsson, L.; Stakenborg, N. et al.
Source: Self-asserted source
Andrew Ji via Scopus - Elsevier
grade
Preferred source (of 2)‎

Visualizing somatic alterations in spatial transcriptomics data of skin cancer

bioRxiv
2022 | Other
DOI: 10.1101/2022.12.05.519162
EID:

2-s2.0-85146602403

Part of ISSN: 26928205
Contributors: Chen, L.; Chang, D.; Tandukar, B.; Deivendran, D.; Cho, R.; Cheng, J.; Bastian, B.C.; Ji, A.L.; Hunter Shain, A.
Source: Self-asserted source
Andrew Ji via Scopus - Elsevier

easyCLIP analysis of RNA-protein interactions incorporating absolute quantification

Nature Communications
2021 | Journal article
DOI: 10.1038/s41467-021-21623-4
EID:

2-s2.0-85102382375

Part of ISSN: 20411723
Contributors: Porter, D.F.; Miao, W.; Yang, X.; Goda, G.A.; Ji, A.L.; Donohue, L.K.H.; Aleman, M.M.; Dominguez, D.; Khavari, P.A.
Source: Self-asserted source
Andrew Ji via Scopus - Elsevier
grade
Preferred source (of 2)‎

Integrating single-cell and spatial transcriptomics to elucidate intercellular tissue dynamics

Nature Reviews Genetics
2021 | Journal article
DOI: 10.1038/s41576-021-00370-8
EID:

2-s2.0-85108789283

Part of ISSN: 14710064 14710056
Contributors: Longo, S.K.; Guo, M.G.; Ji, A.L.; Khavari, P.A.
Source: Self-asserted source
Andrew Ji via Scopus - Elsevier
grade
Preferred source (of 2)‎

The spatial landscape of clonal somatic mutations in benign and malignant tissue

bioRxiv
2021 | Other
DOI: 10.1101/2021.07.12.452018
EID:

2-s2.0-85112667071

Part of ISSN: 26928205
Contributors: Erickson, A.; Berglund, E.; He, M.; Marklund, M.; Mirzazadeh, R.; Schultz, N.; Bergenstråhle, L.; Kvastad, L.; Andersson, A.; Bergenstråhle, J. et al.
Source: Self-asserted source
Andrew Ji via Scopus - Elsevier

The spatial landscape of clonal somatic mutations in benign and malignant tissue

Research Square
2021 | Other
DOI: 10.21203/rs.3.rs-745238/v1
EID:

2-s2.0-85168168318
Contributors: Lundeberg, J.; Erickson, A.; Berglund, E.; He, M.; Marklund, M.; Mirzazadeh, R.; Schultz, N.; Kvastad, L.; Andersson, A.; Bergenstråhle, L. et al.
Source: Self-asserted source
Andrew Ji via Scopus - Elsevier

Erratum: Multimodal Analysis of Composition and Spatial Architecture in Human Squamous Cell Carcinoma (Cell (2020) 182(2) (497–514.e22), (S0092867420306723), (10.1016/j.cell.2020.05.039))

Cell
2020 | Journal article
DOI: 10.1016/j.cell.2020.08.043
EID:

2-s2.0-85090842307

Part of ISSN: 10974172 00928674
Contributors: Ji, A.L.; Rubin, A.J.; Thrane, K.; Jiang, S.; Reynolds, D.L.; Meyers, R.M.; Guo, M.G.; George, B.M.; Mollbrink, A.; Bergenstråhle, J. et al.
Source: Self-asserted source
Andrew Ji via Scopus - Elsevier

Multimodal Analysis of Composition and Spatial Architecture in Human Squamous Cell Carcinoma

Journal of Cleaner Production
2020 | Journal article
DOI: 10.1016/j.cell.2020.05.039
EID:

2-s2.0-85087696271

Part of ISSN: 09596526
Contributors: Ji, A.L.; Rubin, A.J.; Thrane, K.; Jiang, S.; Reynolds, D.L.; Meyers, R.M.; Guo, M.G.; George, B.M.; Mollbrink, A.; Bergenstråhle, J. et al.
Source: Self-asserted source
Andrew Ji via Scopus - Elsevier

Coupled Single-Cell CRISPR Screening and Epigenomic Profiling Reveals Causal Gene Regulatory Networks

Cell
2019 | Journal article
DOI: 10.1016/j.cell.2018.11.022
EID:

2-s2.0-85059878068

Part of ISSN: 10974172 00928674
Contributors: Rubin, A.J.; Parker, K.R.; Satpathy, A.T.; Qi, Y.; Wu, B.; Ong, A.J.; Mumbach, M.R.; Ji, A.L.; Kim, D.S.; Cho, S.W. et al.
Source: Self-asserted source
Andrew Ji via Scopus - Elsevier

Coupled single-cell CRISPR screening and epigenomic profiling reveals causal gene regulatory networks

bioRxiv
2018 | Other
DOI: 10.1101/414870
EID:

2-s2.0-85095483588

Part of ISSN: 26928205
Contributors: Rubin, A.J.; Parker, K.R.; Satpathy, A.T.; Qi, Y.; Wu, B.; Ong, A.J.; Mumbach, M.R.; Ji, A.L.; Kim, D.S.; Cho, S.W. et al.
Source: Self-asserted source
Andrew Ji via Scopus - Elsevier
grade
Preferred source (of 2)‎

Molecular profiling in cutaneous melanoma

JNCCN Journal of the National Comprehensive Cancer Network
2016 | Journal article
DOI: 10.6004/jnccn.2016.0052
EID:

2-s2.0-84964345652

Part of ISSN: 15401413 15401405
Contributors: Ji, A.L.; Bichakjian, C.K.; Swetter, S.M.
Source: Self-asserted source
Andrew Ji via Scopus - Elsevier

Therapy-induced tumour secretomes promote resistance and tumour progression

Nature
2015 | Journal article
DOI: 10.1038/nature14336
EID:

2-s2.0-84928174677

Part of ISSN: 14764687 00280836
Contributors: Obenauf, A.C.; Zou, Y.; Ji, A.L.; Vanharanta, S.; Shu, W.; Shi, H.; Kong, X.; Bosenberg, M.C.; Wiesner, T.; Rosen, N. et al.
Source: Self-asserted source
Andrew Ji via Scopus - Elsevier

Ambulatory melanoma care patterns in the United States.

Journal of skin cancer
2013-08 | Journal article
DOI: 10.1155/2013/689261
PMID: 24027637
PMC: PMC3763272
Contributors: Ji AL; Baze MR; Davis SA; Feldman SR; Fleischer AB
Source: Self-asserted source
Andrew Ji via Europe PubMed Central

Peer review (18 reviews for 7 publications/grants)

Review activity for Cell. (1)
Review activity for Developmental cell. (2)
Review activity for iScience. (1)
Review activity for Nature (2)
Review activity for Nature communications (9)
Review activity for Nature methods. (2)
Review activity for Science immunology. (1)
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