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ResearcherID: H-2792-2017

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Works (50 of 81)

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Non-viral generation of transgenic non-human primates via the piggyBac transposon system

Nature Communications
2025-03-24 | Journal article
DOI: 10.1038/s41467-025-57365-w
Contributors: Masataka Nakaya; Chizuru Iwatani; Setsuko Tsukiyama-Fujii; Ai Mieda; Shoko Tarumoto; Taro Tsujimura; Takuya Yamamoto; Takafumi Ichikawa; Tomonori Nakamura; Ichiro Terakado et al.
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Crossref

SARS-CoV-2-induced disruption of a vascular bed in a microphysiological system caused by type-I interferon from bronchial organoids

Lab on a Chip
2024 | Journal article
DOI: 10.1039/D3LC00768E
Contributors: Kazuya Fujimoto; Yoshikazu Kameda; Yuta Nagano; Sayaka Deguchi; Takuya Yamamoto; Rafal P. Krol; Peter Gee; Yasufumi Matsumura; Toru Okamoto; Miki Nagao et al.
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Crossref

Spermatogonial stem cells in the 129 inbred strain exhibit unique requirements for self-renewal

Development
2024-06-15 | Journal article
DOI: 10.1242/dev.202553
Contributors: Mito Kanatsu-Shinohara; Takuya Yamamoto; Hiroko Morimoto; Tianjiao Liu; Takashi Shinohara
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Crossref

Oxidative phosphorylation is a pivotal therapeutic target of fibrodysplasia ossificans progressiva

Life Science Alliance
2024-05 | Journal article
DOI: 10.26508/lsa.202302219
Contributors: Liping Sun; Yonghui Jin; Megumi Nishio; Makoto Watanabe; Takeshi Kamakura; Sanae Nagata; Masayuki Fukuda; Hirotsugu Maekawa; Shunsuke Kawai; Takuya Yamamoto et al.
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Crossref

Endothelial ROBO4 suppresses PTGS2/COX-2 expression and inflammatory diseases

Communications Biology
2024-05-18 | Journal article
DOI: 10.1038/s42003-024-06317-z
Contributors: Masato Tanaka; Keisuke Shirakura; Yui Takayama; Miki Îœatsui; Yukio Watanabe; Takuya Yamamoto; Junya Takahashi; Shota Tanaka; Nobumasa Hino; Takefumi Doi et al.
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Crossref

The reciprocal regulation between mitochondrial-associated membranes and Notch signaling in skeletal muscle atrophy

2023-12-07 | Preprint
DOI: 10.7554/eLife.89381
Contributors: Yurika Ito; Mari Yamagata; Takuya Yamamoto; Katsuya Hirasaka; Takeshi Nikawa; Takahiko Sato
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The reciprocal regulation between mitochondrial-associated membranes and Notch signaling in skeletal muscle atrophy

2023-12-07 | Preprint
DOI: 10.7554/eLife.89381.2
Contributors: Yurika Ito; Mari Yamagata; Takuya Yamamoto; Katsuya Hirasaka; Takeshi Nikawa; Takahiko Sato
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Crossref

Periportal hepatocyte proliferation at midgestation governs maternal glucose homeostasis in mice

Communications Biology
2023-12-04 | Journal article
DOI: 10.1038/s42003-023-05614-3
Contributors: Satoshi Kozuki; Mio Kabata; Satoko Sakurai; Keiko Iwaisako; Tomomi Nishimura; Masakazu Toi; Takuya Yamamoto; Fumiko Toyoshima
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High-quality single-cell transcriptomics from ovarian histological sections during folliculogenesis

Life Science Alliance
2023-11 | Journal article
DOI: 10.26508/lsa.202301929
Contributors: Hiroki Ikeda; Shintaro Miyao; So Nagaoka; Tomoya Takashima; Sze-Ming Law; Takuya Yamamoto; Kazuki Kurimoto
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Crossref

Intracytoplasmic sperm injection induces transgenerational abnormalities in mice

Journal of Clinical Investigation
2023-11-15 | Journal article
DOI: 10.1172/JCI170140
Contributors: Mito Kanatsu-Shinohara; Yusuke Shiromoto; Narumi Ogonuki; Kimiko Inoue; Satoko Hattori; Kento Miura; Naomi Watanabe; Ayumi Hasegawa; Keiji Mochida; Takuya Yamamoto et al.
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Crossref

Tertiary Lymphoid Tissues Are Microenvironments with Intensive Interactions between Immune Cells and Proinflammatory Parenchymal Cells in Aged Kidneys

Journal of the American Society of Nephrology
2023-10 | Journal article
DOI: 10.1681/ASN.0000000000000202
Contributors: Takahisa Yoshikawa; Akiko Oguchi; Naoya Toriu; Yuki Sato; Takashi Kobayashi; Osamu Ogawa; Hironori Haga; Satoko Sakurai; Takuya Yamamoto; Yasuhiro Murakawa et al.
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The reciprocal regulation between mitochondrial-associated membranes and Notch signaling in skeletal muscle atrophy

2023-07-20 | Preprint
DOI: 10.1101/2023.07.19.549786
Contributors: Yurika Ito; Mari Yamagata; Takuya Yamamoto; Katsuya Hirasaka; Takeshi Nikawa; Takahiko Sato
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Resolution of the curse of dimensionality in single-cell RNA sequencing data analysis

Life Science Alliance
2022-12 | Journal article
DOI: 10.26508/lsa.202201591
Contributors: Yusuke Imoto; Tomonori Nakamura; Emerson G Escolar; Michio Yoshiwaki; Yoji Kojima; Yukihiro Yabuta; Yoshitaka Katou; Takuya Yamamoto; Yasuaki Hiraoka; Mitinori Saitou
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Crossref

Histology-associated transcriptomic heterogeneity in ovarian folliculogenesis revealed by quantitative single-cell RNA-sequencing for tissue sections with DRaqL

2022-12-16 | Preprint
DOI: 10.1101/2022.12.14.520513
Contributors: Hiroki Ikeda; Shintaro Miyao; So Nagaoka; Takuya Yamamoto; Kazuki Kurimoto
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Crossref

Single-cell RNA-seq reveals heterogeneity in hiPSC-derived muscle progenitors and E2F family as a key regulator of proliferation

Life Science Alliance
2022-08 | Journal article
DOI: 10.26508/lsa.202101312
Contributors: Minas Nalbandian; Mingming Zhao; Hiroki Kato; Tatsuya Jonouchi; May Nakajima-Koyama; Takuya Yamamoto; Hidetoshi Sakurai
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Crossref

Vasculature atrophy causes a stiffened microenvironment that augments epidermal stem cell differentiation in aged skin

Nature Aging
2022-07-11 | Journal article
DOI: 10.1038/s43587-022-00244-6
Contributors: Ryo Ichijo; Koichiro Maki; Mio Kabata; Teruasa Murata; Arata Nagasaka; Seiichiro Ishihara; Hisashi Haga; Tetsuya Honda; Taiji Adachi; Takuya Yamamoto et al.
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Hit-and-run silencing of endogenous DUX4 by targeting DNA hypomethylation on D4Z4 repeats in facioscapulohumeral muscular dystrophy

2022-04-12 | Preprint
DOI: 10.1101/2022.04.12.487997
Contributors: Mitsuru Sasaki-Honda; Tatsuya Jonouchi; Meni Arai; Junjie He; Kazusa Okita; Satoko Sakurai; Takuya Yamamoto; Hidetoshi Sakurai
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Crossref

Functional primordial germ cell–like cells from pluripotent stem cells in rats

Science
2022-04-08 | Journal article
DOI: 10.1126/science.abl4412
Contributors: Mami Oikawa; Hisato Kobayashi; Makoto Sanbo; Naoaki Mizuno; Kenyu Iwatsuki; Tomoya Takashima; Keiko Yamauchi; Fumika Yoshida; Takuya Yamamoto; Takashi Shinohara et al.
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Crossref

A versatile and robust cell purification system with an RNA-only circuit composed of microRNA-responsive ON and OFF switches

Science Advances
2022-01-07 | Journal article
DOI: 10.1126/sciadv.abj1793
Contributors: Yoshihiko Fujita; Moe Hirosawa; Karin Hayashi; Takeshi Hatani; Yoshinori Yoshida; Takuya Yamamoto; Hirohide Saito
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Crossref

The X chromosome dosage compensation program during the development of cynomolgus monkeys

Science
2021-11-19 | Journal article
DOI: 10.1126/science.abd8887
Contributors: Ikuhiro Okamoto; Tomonori Nakamura; Kotaro Sasaki; Yukihiro Yabuta; Chizuru Iwatani; Hideaki Tsuchiya; Shin-ichiro Nakamura; Masatsugu Ema; Takuya Yamamoto; Mitinori Saitou
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Crossref

An interplay of NOX1-derived ROS and oxygen determines the spermatogonial stem cell self-renewal efficiency under hypoxia

Genes & Development
2021-02-01 | Journal article
DOI: 10.1101/gad.339903.120
Contributors: Hiroko Morimoto; Takuya Yamamoto; Takehiro Miyazaki; Narumi Ogonuki; Atsuo Ogura; Takashi Tanaka; Mito Kanatsu-Shinohara; Chihiro Yabe-Nishimura; Hongliang Zhang; Yves Pommier et al.
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Crossref

Epithelial expression of Gata4 and Sox2 regulates specification of the squamous–columnar junction via MAPK/ERK signaling in mice

Nature Communications
2021-01-25 | Journal article
DOI: 10.1038/s41467-021-20906-0
Contributors: Nao Sankoda; Wataru Tanabe; Akito Tanaka; Hirofumi Shibata; Knut Woltjen; Tsutomu Chiba; Hironori Haga; Yoshiharu Sakai; Masaki Mandai; Takuya Yamamoto et al.
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Identification of distinct loci for de novo DNA methylation by DNMT3A and DNMT3B during mammalian development

Nature Communications
2020-06-24 | Journal article
DOI: 10.1038/s41467-020-16989-w
Contributors: Masaki Yagi; Mio Kabata; Akito Tanaka; Tomoyo Ukai; Sho Ohta; Kazuhiko Nakabayashi; Masahito Shimizu; Kenichiro Hata; Alexander Meissner; Takuya Yamamoto et al.
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Crossref

Generation of human bronchial organoids for SARS-CoV-2 research

2020-05-26 | Preprint
DOI: 10.1101/2020.05.25.115600
Contributors: Tatsuya Suzuki; Yumi Itoh; Yusuke Sakai; Akatsuki Saito; Daisuke Okuzaki; Daisuke Motooka; Shohei Minami; Takeshi Kobayashi; Takuya Yamamoto; Toru Okamoto et al.
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Crossref

ZGLP1 is a determinant for the oogenic fate in mice

Science
2020-03-06 | Journal article
DOI: 10.1126/science.aaw4115
Contributors: So I. Nagaoka; Fumio Nakaki; Hidetaka Miyauchi; Yoshiaki Nosaka; Hiroshi Ohta; Yukihiro Yabuta; Kazuki Kurimoto; Katsuhiko Hayashi; Tomonori Nakamura; Takuya Yamamoto et al.
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Crossref

Activin A in combination with ERK1/2 MAPK pathway inhibition sustains propagation of mouse embryonic stem cells

Genes to Cells
2017 | Journal article
Source: Self-asserted source
Takuya Yamamoto

Analysis of neural crest cells from Charcot--Marie--Tooth disease patients demonstrates disease-relevant molecular signature

NeuroReport
2017 | Journal article
Source: Self-asserted source
Takuya Yamamoto

Antagonistic interactions between ERK MAP kinase and retinoic acid receptor signaling in colorectal cancer cells

Molecular and Cellular Biology
2017 | Journal article
Source: Self-asserted source
Takuya Yamamoto

Cellular context-dependent consequences of Apc mutations on gene regulation and cellular behavior

Proceedings of the National Academy of Sciences
2017 | Journal article
Source: Self-asserted source
Takuya Yamamoto

Clonal Variation of Human Induced Pluripotent Stem Cells for Induction into the Germ Cell Fate

Biology of Reproduction
2017 | Journal article
Source: Self-asserted source
Takuya Yamamoto

Derivation of ground-state female ES cells maintaining gamete-derived DNA methylation.

Nature
2017 | Journal article
Source: Self-asserted source
Takuya Yamamoto

Discrimination of Stem Cell Status after Subjecting Cynomolgus Monkey Pluripotent Stem Cells to Näıve Conversion

Scientific Reports
2017 | Journal article
Source: Self-asserted source
Takuya Yamamoto

Hybrid Cellular Metabolism Coordinated by Zic3 and Esrrb Synergistically Enhances Induction of Naive Pluripotency

Cell Metabolism
2017 | Journal article
Source: Self-asserted source
Takuya Yamamoto

In vitro expansion of mouse primordial germ cell-like cells recapitulates an epigenetic blank slate

The EMBO Journal
2017 | Journal article
Source: Self-asserted source
Takuya Yamamoto

Nat1 promotes translation of specific proteins that induce differentiation of mouse embryonic stem cells

Proceedings of the National Academy of Sciences
2017 | Journal article
Source: Self-asserted source
Takuya Yamamoto

Proteasome impairment in neural cells derived from HMSN-P patient iPSCs

Molecular brain
2017 | Journal article
Source: Self-asserted source
Takuya Yamamoto

The Src/c-Abl pathway is a potential therapeutic target in amyotrophic lateral sclerosis

Science Translational Medicine
2017 | Journal article
Source: Self-asserted source
Takuya Yamamoto

Structural and spatial chromatin features at developmental gene loci in human pluripotent stem cells

Nature Communications
2017-11-20 | Journal article
DOI: 10.1038/s41467-017-01679-x
Contributors: Hiroki Ikeda; Masamitsu Sone; Shinya Yamanaka; Takuya Yamamoto
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Crossref

A developmental coordinate of pluripotency among mice, monkeys and humans

Nature
2016 | Journal article
Source: Self-asserted source
Takuya Yamamoto

An EWS-FLI1-induced osteosarcoma model unveiled a crucial role of impaired osteogenic differentiation on osteosarcoma development

Stem cell reports
2016 | Journal article
Source: Self-asserted source
Takuya Yamamoto

Identification of MMP1 as a novel risk factor for intracranial aneurysms in ADPKD using iPSC models

Scientific reports
2016 | Journal article
Source: Self-asserted source
Takuya Yamamoto

In vitro derivation and propagation of spermatogonial stem cell activity from mouse pluripotent stem cells

Cell reports
2016 | Journal article
Source: Self-asserted source
Takuya Yamamoto

Persistent requirement and alteration of the key targets of PRDM1 during primordial germ cell development in mice

Biology of reproduction
2016 | Journal article
Source: Self-asserted source
Takuya Yamamoto

Shifting transcriptional machinery is required for long-term memory maintenance and modification in Drosophila mushroom bodies

Nature communications
2016 | Journal article
Source: Self-asserted source
Takuya Yamamoto

The germ cell fate of cynomolgus monkeys is specified in the nascent amnion

Developmental cell
2016 | Journal article
Source: Self-asserted source
Takuya Yamamoto

Induction of pluripotency in astrocytes through a neural stem cell-like state

Journal of Biological Chemistry
2015 | Journal article
Source: Self-asserted source
Takuya Yamamoto

KLF4 N-terminal variance modulates induced reprogramming to pluripotency

Stem cell reports
2015 | Journal article
Source: Self-asserted source
Takuya Yamamoto

New protocol to optimize iPS cells for genome analysis of fibrodysplasia ossificans progressiva

Stem Cells
2015 | Journal article
Source: Self-asserted source
Takuya Yamamoto

Quantitative dynamics of chromatin remodeling during germ cell specification from mouse embryonic stem cells

Cell stem cell
2015 | Journal article
Source: Self-asserted source
Takuya Yamamoto

Robust in vitro induction of human germ cell fate from pluripotent stem cells

Cell stem cell
2015 | Journal article
Source: Self-asserted source
Takuya Yamamoto
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