Personal information

Websites & social links

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Keywords

biocuration, intrinsically disordered proteins, IDP, DisProt

Countries

Italy

Biography

Expert biocurator and training manager of DisProt (https://disprot.org/) database.
Executive Committee member of the International Society for Biocuration (ISB) (term 2021-2024).

Activities

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Employment (2)

Institute of Biomembranes, Bioenergetics and Molecular Biotechnologies: Bari, IT

2021-01-03 to present | Biocurator - lead biocurator of DisProt and PED (Department of Biomedical Sciences, University of Padova)
Employment
Source: Self-asserted source
Federica Quaglia

University of Padua: Padova, Veneto, IT

2020-01-01 to 2021-02-28 | Biocurator (Biomedical Sciences)
Employment
Source: Self-asserted source
Federica Quaglia

Education and qualifications (3)

University of Padua: Padova, Veneto, IT

2016 to 2019 | PhD in Biomedical Sciences
Education
Source: Self-asserted source
Federica Quaglia

University of Padua: Padova, Veneto, IT

2012 to 2014 | MSc in Evolutionary Biology
Education
Source: Self-asserted source
Federica Quaglia

University of Padua: Padova, Veneto, IT

2008 to 2012 | BSc in Biology
Education
Source: Self-asserted source
Federica Quaglia

Works (26)

Searching and Using MobiDB Resource 6 to Explore Predictions and Annotations for Intrinsically Disordered Proteins

Current Protocols
2024-12 | Journal article
DOI: 10.1002/cpz1.70077
Contributors: Maria Cristina Aspromonte; Federica Quaglia; Alexander Miguel Monzon; Damiano Clementel; Alessio Del Conte; Damiano Piovesan; Silvio C. E. Tosatto
Source: check_circle
Crossref

Best practices for the manual curation of intrinsically disordered proteins in DisProt

Database
2024-03-12 | Journal article
DOI: 10.1093/database/baae009
Contributors: Federica Quaglia; Anastasia Chasapi; Maria Victoria Nugnes; Maria Cristina Aspromonte; Emanuela Leonardi; Damiano Piovesan; Silvio C E Tosatto
Source: check_circle
Crossref

DisProt in 2024: improving function annotation of intrinsically disordered proteins

Nucleic Acids Research
2024-01-05 | Journal article
DOI: 10.1093/nar/gkad928
Contributors: Maria Cristina Aspromonte; Maria Victoria Nugnes; Federica Quaglia; Adel Bouharoua; Vasileios Sagris; Vasilis J Promponas; Anastasia Chasapi; Erzsébet Fichó; Galo E Balatti; Gustavo Parisi et al.
Source: check_circle
Crossref

SARS‐CoV‐2 variants preferentially emerge at intrinsically disordered protein sites helping immune evasion

The FEBS Journal
2022-07 | Journal article
DOI: 10.1111/febs.16379
Contributors: Federica Quaglia; Edoardo Salladini; Marco Carraro; Giovanni Minervini; Silvio C.E. Tosatto; Philippe Le Mercier
Source: check_circle
Crossref

Conference report: Biocuration 2021 Virtual Conference

Database
2022-04-09 | Journal article
DOI: 10.1093/database/baac027
Contributors: Federica Quaglia; Rama Balakrishnan; Susan M Bello; Nicole Vasilevsky
Source: check_circle
Crossref

Databases for intrinsically disordered proteins

Acta Crystallographica Section D Structural Biology
2022-02-01 | Journal article
DOI: 10.1107/S2059798321012109
Contributors: Damiano Piovesan; Alexander Miguel Monzon; Federica Quaglia; Silvio C. E. Tosatto
Source: check_circle
Crossref

DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation

Nucleic Acids Research
2022-01-07 | Journal article
DOI: 10.1093/nar/gkab1082
Contributors: Federica Quaglia; Bálint Mészáros; Edoardo Salladini; András Hatos; Rita Pancsa; Lucía B Chemes; Mátyás Pajkos; Tamas Lazar; Samuel Peña-Díaz; Jaime Santos et al.
Source: check_circle
Crossref

ECO: the Evidence and Conclusion Ontology, an update for 2022

Nucleic Acids Research
2021-11-19 | Journal article
DOI: 10.1093/nar/gkab1025
Source: Self-asserted source
Federica Quaglia
grade
Preferred source (of 2)‎

Exploring Curated Conformational Ensembles of Intrinsically Disordered Proteins in the Protein Ensemble Database.

Current protocols
2021-07-01 | Journal article
DOI: 10.1002/cpz1.192
PMID: 34252246
Source: Self-asserted source
Federica Quaglia

APICURON: a database to credit and acknowledge the work of biocurators

Database
2021-04-21 | Journal article
DOI: 10.1093/database/baab019
Contributors: András Hatos; Federica Quaglia; Damiano Piovesan; Silvio C E Tosatto
Source: check_circle
Crossref

Critical assessment of protein intrinsic disorder prediction.

Nature methods
2021-04-19 | Journal article
DOI: 10.1038/s41592-021-01117-3
PMID: 33875885
PMC: PMC8105172
Source: Self-asserted source
Federica Quaglia

APICURON: a database to credit and acknowledge the work of biocurators

2021-02-03 | Preprint
DOI: 10.1101/2021.02.03.429425
Contributors: András Hatos; Federica Quaglia; Damiano Piovesan; Silvio C.E. Tosatto
Source: check_circle
Crossref

MobiDB: intrinsically disordered proteins in 2021.

Nucleic acids research
2021-01-01 | Journal article
DOI: 10.1093/nar/gkaa1058
PMID: 33237329
PMC: PMC7779018
Source: Self-asserted source
Federica Quaglia

PED in 2021: a major update of the protein ensemble database for intrinsically disordered proteins.

Nucleic acids research
2021-01-01 | Journal article
DOI: 10.1093/nar/gkaa1021
PMID: 33305318
PMC: PMC7778965
Source: Self-asserted source
Federica Quaglia
grade
Preferred source (of 2)‎

Exploring Manually Curated Annotations of Intrinsically Disordered Proteins with DisProt.

Current protocols in bioinformatics
2020-12-01 | Journal article
DOI: 10.1002/cpbi.107
PMID: 33017101
Source: Self-asserted source
Federica Quaglia

Experimentally Determined Long Intrinsically Disordered Protein Regions Are Now Abundant in the Protein Data Bank.

International journal of molecular sciences
2020-06-24 | Journal article
DOI: 10.3390/ijms21124496
PMID: 32599863
PMC: PMC7349999
Source: Self-asserted source
Federica Quaglia
grade
Preferred source (of 2)‎

Assessing predictors for new post translational modification sites: A case study on hydroxylation.

PLoS computational biology
2020-06-22 | Journal article
DOI: 10.1371/journal.pcbi.1007967
PMID: 32569263
PMC: PMC7332089
Source: Self-asserted source
Federica Quaglia

DisProt: intrinsic protein disorder annotation in 2020.

Nucleic acids research
2020-01 | Journal article
DOI: 10.1093/nar/gkz975
PMID: 31713636
Contributors: Hatos A; Hajdu-Soltész B; Monzon AM; Palopoli N; Álvarez L; Aykac-Fas B; Bassot C; Benítez GI; Bevilacqua M; Chasapi A et al.
Source: Self-asserted source
Federica Quaglia via Europe PubMed Central

Insights into the molecular features of the von Hippel-Lindau-like protein.

Amino acids
2019-09 | Journal article
DOI: 10.1007/s00726-019-02781-8
PMID: 31485743
Contributors: Minervini G; Quaglia F; Tabaro F; Tosatto SCE
Source: Self-asserted source
Federica Quaglia via Europe PubMed Central

Genotype-phenotype relations of the von Hippel-Lindau tumor suppressor inferred from a large-scale analysis of disease mutations and interactors.

PLoS computational biology
2019-04 | Journal article
DOI: 10.1371/journal.pcbi.1006478
PMID: 30943211
PMC: PMC6464237
Contributors: Minervini G; Quaglia F; Tabaro F; Tosatto SCE
Source: Self-asserted source
Federica Quaglia via Europe PubMed Central

DisProt 7.0: a major update of the database of disordered proteins.

Nucleic acids research
2016-11 | Journal article
DOI: 10.1093/nar/gkw1056
PMID: 27899601
PMC: PMC5210544
Contributors: Piovesan D; Tabaro F; Mičetić I; Necci M; Quaglia F; Oldfield CJ; Aspromonte MC; Davey NE; Davidović R; Dosztányi Z et al.
Source: Self-asserted source
Federica Quaglia via Europe PubMed Central

VHLdb: A database of von Hippel-Lindau protein interactors and mutations.

Scientific reports
2016-08 | Journal article
DOI: 10.1038/srep31128
PMID: 27511743
PMC: PMC4980628
Contributors: Tabaro F; Minervini G; Sundus F; Quaglia F; Leonardi E; Piovesan D; Tosatto SC
Source: Self-asserted source
Federica Quaglia via Europe PubMed Central

Computational analysis of prolyl hydroxylase domain-containing protein 2 (PHD2) mutations promoting polycythemia insurgence in humans.

Scientific reports
2016-01 | Journal article
DOI: 10.1038/srep18716
PMID: 26754054
PMC: PMC4709589
Contributors: Minervini G; Quaglia F; Tosatto SC
Source: Self-asserted source
Federica Quaglia via Europe PubMed Central

Insights into the proline hydroxylase (PHD) family, molecular evolution and its impact on human health.

Biochimie
2015-07 | Journal article
DOI: 10.1016/j.biochi.2015.07.009
PMID: 26187473
Contributors: Minervini G; Quaglia F; Tosatto SC
Source: Self-asserted source
Federica Quaglia via Europe PubMed Central

Contributions to DisProt
Source: check_circle
APICURON

Contributions to PED
Source: check_circle
APICURON
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