Personal information

Finland, United Kingdom

Activities

Works (28)

Genetic background sets the trajectory of cancer evolution

2025-01-15 | Preprint
Contributors: Sarah J. Aitken; Frances Connor; Christine Feig; Tim F. Rayner; Margus Lukk; Juliet Luft; Stuart Aitken; Claudia Arnedo-Pac; James F. Hayes; Michael D. Nicholson et al.
Source: check_circle
Crossref

Pervasive lesion segregation shapes cancer genome evolution.

Nature
2020-06-24 | Journal article
Contributors: Sarah J Aitken; Anderson CJ; Frances Connor; Oriol Pich; Sundaram V; Feig C; Rayner TF; Lukk M; Stuart Aitken; Luft J et al.
Source: Self-asserted source
Margus Lukk

Pervasive lesion segregation shapes cancer genome evolution

2019-12-08 | Preprint | Author
Contributors: Sarah J. Aitken; Craig Anderson; Frances Connor; Oriol Pich; Vasavi Sundaram; Christine Feig; Tim F. Rayner; Margus Lukk; Stuart Aitken; Juliet Luft et al.
Source: Self-asserted source
Margus Lukk
grade
Preferred source (of 2)‎

Crisflash: open-source software to generate CRISPR guide RNAs against genomes annotated with individual variation.

Bioinformatics (Oxford, England)
2019-09-01 | Journal article
Contributors: Jacquin ALS; Duncan T Odom; Lukk M
Source: Self-asserted source
Margus Lukk
grade
Preferred source (of 2)‎

Mutational landscape of a chemically-induced mouse model of liver cancer

Source: Self-asserted source
Margus Lukk

Mutational landscape of a chemically-induced mouse model of liver cancer

Journal of hepatology
2018 | Journal article
Source: Self-asserted source
Margus Lukk

Identification of Cancer Related Genes Using a Comprehensive Map of Human Gene Expression

PloS one
2016 | Journal article
Source: Self-asserted source
Margus Lukk

Successful transmission and transcriptional deployment of a human chromosome via mouse male meiosis

eLife
2016 | Journal article
Source: Self-asserted source
Margus Lukk

Enhancer evolution across 20 mammalian species

Cell
2015 | Journal article
Source: Self-asserted source
Margus Lukk

Aberrant methylation of tRNAs links cellular stress to neuro-developmental disorders

The EMBO journal
2014 | Journal article
Source: Self-asserted source
Margus Lukk

Multi-species, multi-transcription factor binding highlights conserved control of tissue-specific biological pathways

eLife
2014 | Journal article
Source: Self-asserted source
Margus Lukk

AHT-ChIP-seq: a completely automated robotic protocol for high-throughput chromatin immunoprecipitation

Genome biology
2013 | Journal article
Source: Self-asserted source
Margus Lukk

Global gene expression profiling reveals SPINK1 as a potential hepatocellular carcinoma marker

PloS one
2013 | Journal article
Source: Self-asserted source
Margus Lukk

Latent regulatory potential of human-specific repetitive elements

Molecular cell
2013 | Journal article
Source: Self-asserted source
Margus Lukk

An integrated encyclopedia of DNA elements in the human genome

Nature
2012 | Journal article
Source: Self-asserted source
Margus Lukk

MageComet--web application for harmonizing existing large-scale experiment descriptions

Bioinformatics (Oxford, England)
2012 | Journal article
Source: Self-asserted source
Margus Lukk

A user's guide to the encyclopedia of DNA elements (ENCODE)

PLoS biology
2011 | Journal article
Source: Self-asserted source
Margus Lukk

ArrayExpress update--an archive of microarray and high-throughput sequencing-based functional genomics experiments

Nucleic acids research
2011 | Journal article
Source: Self-asserted source
Margus Lukk

Assessing affymetrix GeneChip microarray quality

BMC bioinformatics
2011 | Journal article
Source: Self-asserted source
Margus Lukk

A global map of human gene expression

Nature biotechnology
2010 | Journal article
Source: Self-asserted source
Margus Lukk

ArrayExpress update--from an archive of functional genomics experiments to the atlas of gene expression

Nucleic acids research
2009 | Journal article
Source: Self-asserted source
Margus Lukk

Importing ArrayExpress datasets into R/Bioconductor

Bioinformatics (Oxford, England)
2009 | Journal article
Source: Self-asserted source
Margus Lukk

MAGETabulator, a suite of tools to support the microarray data format MAGE-TAB

Bioinformatics (Oxford, England)
2009 | Journal article
Source: Self-asserted source
Margus Lukk

ArrayExpress--a public database of microarray experiments and gene expression profiles

Nucleic acids research
2007 | Journal article
Source: Self-asserted source
Margus Lukk

Systematic search for the best gene expression markers for melanoma micrometastasis detection

The Journal of pathology
2007 | Journal article
Source: Self-asserted source
Margus Lukk

Switch to an invasive growth phase in melanoma is associated with tenascin-C, fibronectin, and procollagen-I forming specific channel structures for invasion

The Journal of pathology
2006 | Journal article
Source: Self-asserted source
Margus Lukk

An MDL method for finding haplotype blocks and for estimating the strength of haplotype block boundaries

Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing
2003 | Journal article
Source: Self-asserted source
Margus Lukk

Minimum description length block finder, a method to identify haplotype blocks and to compare the strength of block boundaries

American journal of human genetics
2003 | Journal article
Source: Self-asserted source
Margus Lukk