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http://baradlab.com

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Employment (2)

Oregon Health & Science University: Portland, US

2024 to present | Assistant Professor (Chemical Physiology and Biochemistry)
Employment
Source: Self-asserted source
Benjamin A Barad

Scripps Research Institute: San Diego, US

2019 to 2023 | American Cancer Society Postdoctoral Fellow (Integrative Computational and Structural Biology)
Employment
Source: Self-asserted source
Benjamin A Barad

Education and qualifications (2)

University of California San Francisco: San Francisco, CA, US

2013 to 2019 | PhD (Biophysics)
Education
Source: Self-asserted source
Benjamin A Barad

Stanford University: Stanford, CA, US

2009 to 2013 | BS (Chemistry)
Education
Source: Self-asserted source
Benjamin A Barad

Works (11)

Mapping protein dynamics at high spatial resolution with temperature-jump X-ray crystallography

Nature Chemistry
2023-11 | Journal article
DOI: 10.1038/s41557-023-01329-4
Contributors: Alexander M. Wolff; Eriko Nango; Iris D. Young; Aaron S. Brewster; Minoru Kubo; Takashi Nomura; Michihiro Sugahara; Shigeki Owada; Benjamin A. Barad; Kazutaka Ito et al.
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Crossref

Quantifying organellar ultrastructure in cryo-electron tomography using a surface morphometrics pipeline

Journal of Cell Biology
2023-04-03 | Journal article
DOI: 10.1083/jcb.202204093
Contributors: Benjamin A. Barad; Michaela Medina; Daniel Fuentes; R. Luke Wiseman; Danielle A. Grotjahn
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Crossref
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Nanoscale details of mitochondrial fission revealed by cryo-electron tomography

2021-12-14 | Preprint
DOI: 10.1101/2021.12.13.472487
Contributors: Shrawan Kumar Mageswaran; Danielle Ann Grotjahn; Xiangrui Zeng; Benjamin Asher Barad; Michaela Medina; My Hanh Hoang; Megan J Dobro; Yi-Wei Chang; Min Xu; Wei Yuan Yang et al.
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Crossref

Outcomes of the 2019 EMDataResource model challenge: validation of cryo-EM models at near-atomic resolution

2020-06-15 | Preprint
DOI: 10.1101/2020.06.12.147033
Contributors: Catherine L. Lawson; Andriy Kryshtafovych; Paul D. Adams; Pavel V. Afonine; Matthew L. Baker; Benjamin A. Barad; Paul Bond; Tom Burnley; Renzhi Cao; Jianlin Cheng et al.
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Crossref
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Differences in the chitinolytic activity of mammalian chitinases on soluble and crystalline substrates

2019-09-08 | Other
DOI: 10.1101/762336
Contributors: Benjamin A. Barad; Lin Liu; Roberto Efrain Diaz; Ralp Basilio; Steven J. Van Dyken; Richard M. Locksley; James S. Fraser
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Crossref
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Synthetic Essentiality of Metabolic Regulator PDHK1 in PTEN-Deficient Cells and Cancers.

Cell reports
2019-08-01 | Journal article
DOI: 10.1016/j.celrep.2019.07.063
DOI: 10.1101/441295
PMID: 31461649
PMC: PMC6728083
Source: Self-asserted source
Benjamin A Barad
grade
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Temperature-Jump Solution X-ray Scattering Reveals Distinct Motions in a Dynamic Enzyme

2018-11-21 | Other
DOI: 10.1101/476432
Contributors: Michael C. Thompson; Benjamin A. Barad; Alexander M. Wolff; Hyun Sun Cho; Friedrich Schotte; Daniel M.C. Schwarz; Philip Anfinrud; James S. Fraser
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Crossref

XFEL structures of the influenza M2 proton channel: Room temperature water networks and insights into proton conduction

Proceedings of the National Academy of Sciences
2017-12-19 | Journal article
DOI: 10.1073/pnas.1705624114
Part of ISSN: 0027-8424
Part of ISSN: 1091-6490
Source: Self-asserted source
Benjamin A Barad

Determination of ubiquitin fitness landscapes under different chemical stresses in a classroom setting.

2016 | Journal article
PMID: 27111525
PMC: PMC4862753
Contributors: Mavor D; Barlow K; Thompson S; Barad BA; Bonny AR; Cario CL; Gaskins G; Liu Z; Deming L; Axen SD et al.
Source: Self-asserted source
Benjamin A Barad via Europe PubMed Central

Automated structure refinement of macromolecular assemblies from cryo-EM maps using Rosetta

eLife
2016-09-26 | Journal article
DOI: 10.7554/eLife.17219
Contributors: Ray Yu-Ruei Wang; Yifan Song; Benjamin A Barad; Yifan Cheng; James S Fraser; Frank DiMaio
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Crossref

EMRinger: side chain-directed model and map validation for 3D cryo-electron microscopy.

2015-10 | Journal article
PMID: 26280328
PMC: PMC4589481
Contributors: Barad BA; Echols N; Wang RY; Cheng Y; DiMaio F; Adams PD; Fraser JS
Source: Self-asserted source
Benjamin A Barad via Europe PubMed Central
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