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ResearcherID: O-9911-2014

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Employment (2)

The University of Texas MD Anderson Cancer Center: Houston, TX, US

2018 to present | Assistant Professor (Department of Bioinformatics and Computational Biology)
Employment
Source: Self-asserted source
Jun Li

University of Texas MD Anderson Cancer Center: Houston, TX, US

2013 to 2018 | PostDoc (Bioinformatics and Computational Biology)
Employment
Source: Self-asserted source
Jun Li

Education and qualifications (2)

CAS-MPG Partner Institute for Computational Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences: Shanghai, Shanghai, CN

2008 to 2013 | Ph.D.
Education
Source: Self-asserted source
Jun Li

Wuhan University: Wuhan, Hubei, CN

2004 to 2008 | BS (Mathematics and Statistics)
Education
Source: Self-asserted source
Jun Li

Works (34)

Obesity Is Associated with Altered Tumor Metabolism in Metastatic Melanoma

Clinical Cancer Research
2023-01-04 | Journal article
DOI: 10.1158/1078-0432.CCR-22-2661
Contributors: Andrew W. Hahn; Ashley V. Menk; Dayana B. Rivadeneira; Ryan C. Augustin; Mingchu Xu; Jun Li; Xiaogang Wu; Aditya K. Mishra; Tuba N. Gide; Camelia Quek et al.
Source: check_circle
Crossref

A functional genomic approach to actionable gene fusions for precision oncology

Science Advances
2022-02-11 | Journal article
DOI: 10.1126/sciadv.abm2382
Contributors: Jun Li; Hengyu Lu; Patrick Kwok-Shing Ng; Angeliki Pantazi; Carman Ka Man Ip; Kang Jin Jeong; Bianca Amador; Richard Tran; Yiu Huen Tsang; Lixing Yang et al.
Source: check_circle
Crossref

Comprehensive assessment of computational algorithms in predicting cancer driver mutations

Genome Biology
2020-12 | Journal article
DOI: 10.1186/s13059-020-01954-z
Part of ISSN: 1474-760X
Source: Self-asserted source
Jun Li

Large-Scale Characterization of Drug Responses of Clinically Relevant Proteins in Cancer Cell Lines

Cancer Cell
2020-12 | Journal article
DOI: 10.1016/j.ccell.2020.10.008
Contributors: Wei Zhao; Jun Li; Mei-Ju M. Chen; Yikai Luo; Zhenlin Ju; Nicole K. Nesser; Katie Johnson-Camacho; Christopher T. Boniface; Yancey Lawrence; Nupur T. Pande et al.
Source: check_circle
Crossref

Next-Generation Analytics for Omics Data

Cancer Cell
2020-09 | Journal article
DOI: 10.1016/j.ccell.2020.09.002
Part of ISSN: 1535-6108
Source: Self-asserted source
Jun Li

Comprehensive molecular characterization of mitochondrial genomes in human cancers

Nature Genetics
2020-03-02 | Journal article
DOI: 10.1038/s41588-019-0557-x
Contributors: Yuan Yuan; Young Seok Ju; Youngwook Kim; Jun Li; Yumeng Wang; Christopher J. Yoon; Yang Yang; Inigo Martincorena; Chad J. Creighton; John N. Weinstein et al.
Source: check_circle
Crossref

TCPA v3.0: An Integrative Platform to Explore the Pan-Cancer Analysis of Functional Proteomic Data

Molecular & Cellular Proteomics
2019-08-09 | Journal article
DOI: 10.1074/mcp.ra118.001260
Part of ISSN: 1535-9476
Part of ISSN: 1535-9484
Source: Self-asserted source
Jun Li

Integrated Genomic Analysis of the Ubiquitin Pathway across Cancer Types

Cell Rep
2018 | Journal article
DOI: 10.1016/j.celrep.2018.03.047
Source: Self-asserted source
Jun Li

Molecular Characterization and Clinical Relevance of Metabolic Expression Subtypes in Human Cancers

Cell Rep
2018 | Journal article
DOI: 10.1016/j.celrep.2018.03.077
Source: Self-asserted source
Jun Li

Systematic Functional Annotation of Somatic Mutations in Cancer

Cancer Cell
2018 | Journal article
DOI: 10.1016/j.ccell.2018.01.021
Source: Self-asserted source
Jun Li

Comprehensive Molecular Characterization of the Hippo Signaling Pathway in Cancer

Cell Reports
2018-10 | Journal article
DOI: 10.1016/j.celrep.2018.10.001
Part of ISSN: 2211-1247
Source: Self-asserted source
Jun Li

Biosynthetic energy cost for amino acids decreases in cancer evolution

Nature Communications
2018-10-08 | Journal article
DOI: 10.1038/s41467-018-06461-1
Contributors: Hong Zhang; Yirong Wang; Jun Li; Han Chen; Xionglei He; Huiwen Zhang; Han Liang; Jian Lu
Source: check_circle
Crossref

Credentialing Individual Samples for Proteogenomic Analysis

Molecular & Cellular Proteomics
2018-08 | Journal article
DOI: 10.1074/mcp.ra118.000645
Part of ISSN: 1535-9476
Part of ISSN: 1535-9484
Source: Self-asserted source
Jun Li

Characterization of Human Cancer Cell Lines by Reverse-phase Protein Arrays

Cancer Cell
2017 | Journal article
DOI: 10.1016/j.ccell.2017.01.005
Source: Self-asserted source
Jun Li

Comparative genomic analysis of esophageal squamous cell carcinoma between Asian and Caucasian patient populations

Nat Commun
2017 | Journal article
DOI: 10.1038/s41467-017-01730-x
Source: Self-asserted source
Jun Li

Explore, Visualize, and Analyze Functional Cancer Proteomic Data Using the Cancer Proteome Atlas

Cancer Res
2017 | Journal article
DOI: 10.1158/0008-5472.CAN-17-0369
Source: Self-asserted source
Jun Li

Systematic characterization of A-to-I RNA editing hotspots in microRNAs across human cancers

Genome Res
2017 | Journal article
DOI: 10.1101/gr.219741.116
Source: Self-asserted source
Jun Li

The LINK-A lncRNA interacts with PtdIns(3,4,5)P3 to hyperactivate AKT and confer resistance to AKT inhibitors

Nat Cell Biol
2017 | Journal article
DOI: 10.1038/ncb3473
Source: Self-asserted source
Jun Li
grade
Preferred source (of 2)‎

Comprehensive Characterization of Molecular Differences in Cancer between Male and Female Patients

Cancer Cell
2016 | Journal article
DOI: http://dx.doi.org/10.1016/j.ccell.2016.04.001
Source: Self-asserted source
Jun Li
grade
Preferred source (of 2)‎

Comprehensive Molecular Characterization of Papillary Renal-Cell Carcinoma

N Engl J Med
2016 | Journal article
DOI: 10.1056/NEJMoa1505917
Source: Self-asserted source
Jun Li

MYC mutation profiling and prognostic significance in de novo diffuse large B-cell lymphoma

Clinical Cancer Research
2016 | Journal article
DOI: 10.1158/1078-0432.CCR-15-2296
ARXIV:

http://clincancerres.aacrjournals.org/content/early/2016/03/02/1078-0432.CCR-15-2296.full.pdf
Source: Self-asserted source
Jun Li
grade
Preferred source (of 2)‎

TANRIC: An Interactive Open Platform to Explore the Function of lncRNAs in Cancer

Cancer Res
2015 | Journal article
DOI: 10.1158/0008-5472.CAN-15-0273
Source: Self-asserted source
Jun Li

The Genomic Landscape and Clinical Relevance of A-to-I RNA Editing in Human Cancers

Cancer Cell
2015 | Journal article
DOI: 10.1016/j.ccell.2015.08.013
Source: Self-asserted source
Jun Li

A community computational challenge to predict the activity of pairs of compounds

Nat Biotechnol
2014 | Journal article
DOI: 10.1038/nbt.3052
Source: Self-asserted source
Jun Li

A community effort to assess and improve drug sensitivity prediction algorithms

Nat Biotechnol
2014 | Journal article
DOI: 10.1038/nbt.2877
Source: Self-asserted source
Jun Li

A pan-cancer proteomic perspective on The Cancer Genome Atlas

Nat Commun
2014 | Journal article
DOI: 10.1038/ncomms4887
Source: Self-asserted source
Jun Li

Gene co-expression network analysis reveals common system-level properties of prognostic genes across cancer types

Nat Commun
2014 | Journal article
DOI: 10.1038/ncomms4231
Source: Self-asserted source
Jun Li

Multiplatform analysis of 12 cancer types reveals molecular classification within and across tissues of origin

Cell
2014 | Journal article
DOI: 10.1016/j.cell.2014.06.049
Source: Self-asserted source
Jun Li

The Pan-Cancer analysis of pseudogene expression reveals biologically and clinically relevant tumour subtypes

Nat Commun
2014 | Journal article
DOI: 10.1038/ncomms4963
Source: Self-asserted source
Jun Li

BinAligner: a heuristic method to align biological networks

BMC Bioinformatics
2013 | Journal article
DOI: 10.1186/1471-2105-14-S14-S8
Source: Self-asserted source
Jun Li

TCPA: a resource for cancer functional proteomics data

Nat Methods
2013 | Journal article
DOI: 10.1038/nmeth.2650
Source: Self-asserted source
Jun Li

The Cancer Genome Atlas Pan-Cancer analysis project

Nat Genet
2013 | Journal article
DOI: 10.1038/ng.2764
Source: Self-asserted source
Jun Li

SurvNet: a web server for identifying network-based biomarkers that most correlate with patient survival data

Nucleic Acids Research
2012 | Journal article
DOI: 10.1093/nar/gks386
Source: Self-asserted source
Jun Li

Analysis on the reconstruction accuracy of the Fitch method for inferring ancestral states

BMC Bioinformatics
2011 | Journal article
DOI: 10.1186/1471-2105-12-18
Source: Self-asserted source
Jun Li
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