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Keywords

Bioinformatics, Gene Expression, Visual Analytics, non-coding RNAs, Pathogenomics,

Biography

Kay Nieselt has a PhD in mathematics from the University of Bielefeld in Germany and is a professor for bioinformatics at the University of Tübingen. Since her Postdoc years in Göttingen, New Zealand and Munich her research interest lies in the field of bioinformatics. Since 2002 she has been the leader of the research group "Integrative Transcriptomics" in the Center for Bioinformatics at the University of Tübingen.
In her group research projects are focused on expression analysis and RNA bioinformatics. During the last years her group has designed algorithms and software systems for the analysis of microarray and RNAseq data. The special focus within this area are visualization methods for highdimensional microarray data, application of machine learning algorithms for pattern/feature distinction, and statistical methods applied to high-dimensional gene expression data.

Activities

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Professional activities (1)

International Society for Computational Biology: Bethesda, Maryland, US

2010 to present | Member and BioVis COSI representative
Membership
Source: Self-asserted source
Kay Nieselt

Works (20)

Journal article
DOI:

10.1186/1748-7188-1-9
Source: Self-asserted source
Kay Nieselt

Journal article
DOI:

10.1186/1471-2105-5-128
Source: Self-asserted source
Kay Nieselt

An eQTL biological data visualization challenge and approaches from the visualization community

Journal article
DOI:

10.1186/1471-2105-13-S8-S8
Source: Self-asserted source
Kay Nieselt

Basement Membrane Remodeling in Skeletal Muscles of Patients with Limb Ischemia Involves Regulation of Matrix Metalloproteinases and Tissue Inhibitor of Matrix Metalloproteinases

Journal article
DOI:

10.1159/000100376
Source: Self-asserted source
Kay Nieselt

Comparative analysis of structured RNAs in S. cerevisiae indicates a multitude of different functions

Journal article
DOI:

10.1186/1741-7007-5-25
Source: Self-asserted source
Kay Nieselt

Graphs in sequence spaces: a review of statistical geometry

Journal article
DOI:

10.1016/S0301-4622(97)00064-1
Source: Self-asserted source
Kay Nieselt

Identification of a novel mouse Iroquois homeobox gene,Irx5, and chromosomal localisation of all members of the mouse Iroquois gene family

Journal article
DOI:

10.1002/(SICI)1097-0177(200005)218:1<160::AID-DVDY14>3.0.CO;2-2
Source: Self-asserted source
Kay Nieselt

iHAT: Interactive hierarchical aggregation table

Conference paper
DOI:

10.1109/BioVis.2011.6094049
Source: Self-asserted source
Kay Nieselt

iHAT: interactive Hierarchical Aggregation Table for Genetic Association Data

Journal article
DOI:

10.1186/1471-2105-13-S8-S2
Source: Self-asserted source
Kay Nieselt

Lactate modulates gene expression in human mesenchymal stem cells

Journal article
DOI:

10.1007/s00423-008-0286-6
Source: Self-asserted source
Kay Nieselt

Mayday - integrative analytics for expression data

Journal article
DOI:

10.1186/1471-2105-11-121
Source: Self-asserted source
Kay Nieselt

Mayday SeaSight: Combined Analysis of Deep Sequencing and Microarray Data

Journal article
DOI:

10.1371/journal.pone.0016345
Source: Self-asserted source
Kay Nieselt

nocoRNAc: Characterization of non-coding RNAs in prokaryotes

Journal article
DOI:

10.1186/1471-2105-12-40
Source: Self-asserted source
Kay Nieselt

PGK1 a Potential Marker for Peritoneal Dissemination in Gastric Cancer

Journal article
DOI:

10.1159/000129635
Source: Self-asserted source
Kay Nieselt

SpRay: A visual analytics approach for gene expression data

Conference paper
DOI:

10.1109/VAST.2009.5333911
Source: Self-asserted source
Kay Nieselt

The Emergence of Genetic Coding in Physical Systems

Journal article
DOI:

10.1006/jtbi.1997.0404
Source: Self-asserted source
Kay Nieselt

TIALA - Time series alignment analysis

Conference paper
DOI: 10.1109/BioVis.2011.6094048
Source: Self-asserted source
Kay Nieselt

Visualizing dimensionality reduction of systems biology data

Journal article
DOI:

10.1007/s10618-012-0268-8
Source: Self-asserted source
Kay Nieselt

Visuelle Analytik biologischer Daten

Journal article
DOI:

10.1007/s00287-010-0482-y
Source: Self-asserted source
Kay Nieselt

Yersinia pestis: New Evidence for an Old Infection

Journal article
DOI:

10.1371/journal.pone.0049803
Source: Self-asserted source
Kay Nieselt
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