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ResearcherID: O-5498-2014
Scopus Author ID: 57219155367

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Employment (3)

University of New South Wales: Sydney, NSW, AU

2021-10-01 to present | Group Leader (EMBL Australia node in Single Molecule Science)
Employment
Source: Self-asserted source
Scott Berry

University of Zurich: Zurich, ZH, CH

2016-11-01 to 2021-07-31 | Postdoctoral research fellow (Molecular Life Sciences)
Employment
Source: Self-asserted source
Scott Berry

John Innes Centre: Norwich, Norfolk, GB

2015-10 to 2016-09 | Postdoctoral research fellow (Cell and Developmental Biology)
Employment
Source: Self-asserted source
Scott Berry

Education and qualifications (3)

John Innes Centre: Norwich, Norfolk, GB

2011-10-01 to 2015-09-30 | Rotation PhD in Plant and Microbial Sciences (Cell and Developmental Biology / Computational and Systems Biology)
Education
Source: Self-asserted source
Scott Berry

University of Western Australia: Perth, WA, AU

2010 to 2010 | B. Sc. (Hons.) Theoretical Physics (Physics)
Education
Source: Self-asserted source
Scott Berry

University of Adelaide: Adelaide, SA, AU

2004 to 2007 | B. Sc. (Majors: Theoretical Physics and Biochemistry)
Education
Source: Self-asserted source
Scott Berry

Funding (4)

Regulating the composition of biomolecular condensates in living cells

2024-07-11 to 2027-07-10 | Grant
Australian Research Council (Canberra, AU)
URL: https://app.dimensions.ai/details/grant/grant.13822226
GRANT_NUMBER: DP240102533
Source: Self-asserted source
Scott Berry via DimensionsWizard

Coordinating gene expression and cell size: the role of feedback regulation

2023-01-01 to 2025-12-31 | Grant
Australian Research Council (Canberra, AU)
URL: https://app.dimensions.ai/details/grant/grant.12983884
GRANT_NUMBER: DE230100271
Source: Self-asserted source
Scott Berry via DimensionsWizard

Mechanisms underlying coordination of single-cell transcriptomes with cell volume and surface area

2017-05-01 to 2020-04-30 | Grant
International Human Frontier Science Program Organization (Strasbourg, FR)
URL: https://app.dimensions.ai/details/grant/grant.7574323
GRANT_NUMBER:

grant.7574323
Source: Self-asserted source
Scott Berry via DimensionsWizard

Mechanisms of transcriptome regulation by cell volume and surface area

2017-01 to 2018-12 | Salary award
European Molecular Biology Organization (Heidelberg, DE)
GRANT_NUMBER:

ALTF 1175-2016
Source: Self-asserted source
Scott Berry

Works (20)

CRL3-ARMC5 ubiquitin ligase and Integrator phosphatase form parallel mechanisms to control early stages of RNA Pol II transcription

Molecular Cell
2024-12 | Journal article
DOI: 10.1016/j.molcel.2024.11.024
Part of ISSN: 1097-2765
Contributors: Roberta Cacioppo; Alexander Gillis; Iván Shlamovitz; Andrew Zeller; Daniela Castiblanco; Alastair Crisp; Benjamin Haworth; Angela Arabiotorre; Pegah Abyaneh; Yu Bao et al.
Source: Self-asserted source
Scott Berry

Arrayed CRISPR libraries for the genome-wide activation, deletion and silencing of human protein-coding genes

Nature Biomedical Engineering
2024-12-04 | Journal article
DOI: 10.1038/s41551-024-01278-4
Part of ISSN: 2157-846X
Contributors: Jiang-An Yin; Lukas Frick; Manuel C. Scheidmann; Tingting Liu; Trevisan Chiara; Ashutosh Dhingra; Anna Spinelli; Yancheng Wu; Longping Yao; Dalila Laura Vena et al.
Source: Self-asserted source
Scott Berry

Global control of RNA polymerase II

Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms
2024-06 | Journal article
DOI: 10.1016/j.bbagrm.2024.195024
Part of ISSN: 1874-9399
Contributors: Alexander Gillis; Scott Berry
Source: Self-asserted source
Scott Berry

Learning consistent subcellular landmarks to quantify changes in multiplexed protein maps

Nature Methods
2023-07 | Journal article
DOI: 10.1038/s41592-023-01894-z
Contributors: Hannah Spitzer; Scott Berry; Mark Donoghoe; Lucas Pelkmans; Fabian J. Theis
Source: check_circle
Crossref

Integrating analog and digital modes of gene expression at Arabidopsis FLC

eLife
2023-07-19 | Journal article
DOI: 10.7554/eLife.79743
Contributors: Rea L Antoniou-Kourounioti; Anis Meschichi; Svenja Reeck; Scott Berry; Govind Menon; Yusheng Zhao; John Fozard; Terri Holmes; Lihua Zhao; Huamei Wang et al.
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Mechanisms of cellular mRNA transcript homeostasis

Trends in Cell Biology
2022-08 | Journal article
DOI: 10.1016/j.tcb.2022.05.003
Contributors: Scott Berry; Lucas Pelkmans
Source: check_circle
Crossref

Feedback from nuclear RNA on transcription promotes robust RNA concentration homeostasis in human cells

Cell Systems
2022-06-15 | Journal article
DOI: 10.1016/j.cels.2022.04.005
Part of ISSN: 2405-4712
Contributors: Scott Berry; Micha Müller; Arpan Rai; Lucas Pelkmans
Source: Self-asserted source
Scott Berry

Author Correction: High content genome-wide siRNA screen to investigate the coordination of cell size and RNA production

Scientific Data
2021-12-02 | Journal article
DOI: 10.1038/s41597-021-01096-2
Contributors: Micha Müller; Merve Avar; Daniel Heinzer; Marc Emmenegger; Adriano Aguzzi; Lucas Pelkmans; Scott Berry
Source: check_circle
Crossref

High content genome-wide siRNA screen to investigate the coordination of cell size and RNA production

Scientific Data
2021-06-28 | Journal article
DOI: 10.1038/s41597-021-00944-5
Contributors: Micha Müller; Merve Avar; Daniel Heinzer; Marc Emmenegger; Adriano Aguzzi; Lucas Pelkmans; Scott Berry
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Nuclear RNA concentration coordinates RNA production with cell size in human cells

2021-05-17 | Other
DOI: 10.1101/2021.05.17.444432
Contributors: Scott Berry; Micha Müller; Lucas Pelkmans
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Disruption of an RNA-binding hinge region abolishes LHP1-mediated epigenetic repression.

Genes & development
2017-11-01 | Journal article
DOI: 10.1101/gad.305227.117
PMID: 29212661
PMC: PMC5749160
Source: Self-asserted source
Scott Berry
grade
Preferred source (of 3)‎

Distinct phases of Polycomb silencing to hold epigenetic memory of cold in Arabidopsis

Science
2017-09-15 | Journal article
DOI: 10.1126/science.aan1121
Source: Self-asserted source
Scott Berry
grade
Preferred source (of 3)‎

Slow Chromatin Dynamics Allow Polycomb Target Genes to Filter Fluctuations in Transcription Factor Activity.

Cell systems
2017-04 | Journal article
DOI: 10.1016/j.cels.2017.02.013
PMID: 28342717
PMC: PMC5409831
Source: Self-asserted source
Scott Berry via Europe PubMed Central
grade
Preferred source (of 2)‎

Local chromatin environment of a Polycomb target gene instructs its own epigenetic inheritance

eLife
2015 | Journal article
DOI:

10.7554/eLife.07205
Source: Self-asserted source
Scott Berry
grade
Preferred source (of 3)‎

Environmental perception and epigenetic memory: mechanistic insight through FLC.

The Plant journal : for cell and molecular biology
2015-05-29 | Journal article
DOI: 10.1111/tpj.12869
PMID: 25929799
PMC: PMC4691321
Source: Self-asserted source
Scott Berry
grade
Preferred source (of 2)‎

Lipopolysaccharide O antigen size distribution is determined by a chain extension complex of variable stoichiometry in Escherichia coli O9a

Proceedings of the National Academy of Sciences of the United States of America
2014 | Journal article
DOI:

10.1073/pnas.1400814111
Contributors: King, Jerry D.; Berry, Scott; Clarke, Bradley R.; Morris, Richard J.; Whitfield, Chris
Source: Self-asserted source
Scott Berry via ResearcherID
grade
Preferred source (of 2)‎

Illustrations of mathematical modeling in biology: epigenetics, meiosis, and an outlook.

Cold Spring Harbor symposia on quantitative biology
2012 | Journal article
DOI:

10.1101/sqb.2013.77.015941
Contributors: Richards, D; Berry, S; Howard, M
Source: Self-asserted source
Scott Berry via ResearcherID
grade
Preferred source (of 2)‎

qwViz: Visualisation of quantum walks on graphs

Computer Physics Communications
2011 | Journal article
DOI: 10.1016/j.cpc.2011.06.002
Source: Self-asserted source
Scott Berry
grade
Preferred source (of 3)‎

Two-particle quantum walks: Entanglement and graph isomorphism testing

Physical Review a
2011 | Journal article
DOI:

10.1103/PhysRevA.83.042317
Contributors: Berry, Scott D.; Wang, Jingbo B.
Source: Self-asserted source
Scott Berry via ResearcherID
grade
Preferred source (of 2)‎

Quantum-walk-based search and centrality

Physical Review a
2010 | Journal article
DOI:

10.1103/PhysRevA.82.042333
Contributors: Berry, Scott D.; Wang, Jingbo B.
Source: Self-asserted source
Scott Berry via ResearcherID
grade
Preferred source (of 2)‎
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