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Mir Mubashir Khalid
Bangladesh

Activities

Employment (6)

Buck Institute for Research on Aging: Novato, California, US

2024-03-01 to present | Postdoctoral Researcher
Employment
Source: Self-asserted source
Mir Mubashir Khalid

Gladstone Institutes: San Francisco, California, US

2023-01-01 to 2024-02-29 | Scientist (Gladstone Institutes of Virology (GIV))
Employment
Source: Self-asserted source
Mir Mubashir Khalid

Gladstone Institutes: San Francisco, California, US

2021-10-01 to 2022-12-31 | Post-doctoral Scholar (Gladstone Institutes of Virology (GIV))
Employment
Source: Self-asserted source
Mir Mubashir Khalid

Gladstone Institutes: San Francisco, CA, US

2016-10-11 to 2021-09-30 | Graduate Student (Gladstone Institute of Virology & Immunology)
Employment
Source: Self-asserted source
Mir Mubashir Khalid

Erasmus MC: Rotterdam, Zuid-Holland, NL

2015-11-01 to 2016-09-01 | Research Analyst (Biochemistry)
Employment
Source: Self-asserted source
Mir Mubashir Khalid

International Centre for Diarrhoeal Disease Research: Dhaka, Dhaka District, BD

2012-11-14 to 2013-08-31 | Research Officer (Emerging Diseases & Immunobiology)
Employment
Source: Self-asserted source
Mir Mubashir Khalid

Education and qualifications (6)

Erasmus Universiteit Rotterdam: Rotterdam, Zuid-Holland, NL

2016-10 to 2022-01-11 | PhD (Department of Biochemistry)
Education
Source: Self-asserted source
Mir Mubashir Khalid

Erasmus MC: Rotterdam, Zuid-Holland, NL

2013-09-02 to 2015-08-28 | Master of Science (Research Master Infection & Immunity)
Education
Source: Self-asserted source
Mir Mubashir Khalid

University of Dhaka Faculty of Biological Sciences: Dhaka, Dhaka District, BD

2011-08-01 to 2012-11-11 | Master of Science (Genetic Engineering & Biotechnology)
Education
Source: Self-asserted source
Mir Mubashir Khalid

University of Dhaka Faculty of Biological Sciences: Dhaka, Dhaka District, BD

2007-03-01 to 2011-07-23 | Bachelor of Science (Genetic Engineering & Biotechnology)
Education
Source: Self-asserted source
Mir Mubashir Khalid

Dhak Residential Model College: Dhaka, BD

2004-08 to 2006-09-07 | Higher Secondary School Certificate (Science)
Education
Source: Self-asserted source
Mir Mubashir Khalid

Rani Bilasmoni Gov't Boys' High School: Gazipur, BD

2002-01-01 to 2004-06-26 | Secondary School Certificate (Science)
Education
Source: Self-asserted source
Mir Mubashir Khalid

Works (43)

NF-κB inhibitor alpha controls SARS-CoV-2 infection in ACE2-overexpressing human airway organoids

Scientific Reports
2024-07-04 | Journal article
Part of ISSN: 2045-2322
Contributors: Camille R. Simoneau; Pei-Yi Chen; Galen K. Xing; Jennifer M. Hayashi; Irene P. Chen; Mir M. Khalid; Nathan L. Meyers; Taha Y. Taha; Kristoffer E. Leon; Rahul K. Suryawanshi et al.
Source: Self-asserted source
Mir Mubashir Khalid

Assembly of SARS-CoV-2 nucleocapsid protein with nucleic acid

Nucleic Acids Research
2024-06-24 | Journal article
Part of ISSN: 0305-1048
Part of ISSN: 1362-4962
Contributors: Huaying Zhao; Abdullah M Syed; Mir M Khalid; Ai Nguyen; Alison Ciling; Di Wu; Wai-Ming Yau; Sanjana Srinivasan; Dominic Esposito; Jennifer A Doudna et al.
Source: Self-asserted source
Mir Mubashir Khalid

Regulation of virion production by the ORF8 signal peptide across SARS-CoV-2 variants

2024-03-06 | Preprint
Contributors: Mir M Khalid; Irene P. Chen; Frank S Soveg; Taha Y. Taha; Takako Tabata; Rahul Suryawanshi; Abdullah M. Syed; Alison Ciling; Maria McCavitt-Malvido; Ursula Schulze-Gahmen et al.
Source: Self-asserted source
Mir Mubashir Khalid

Assembly reactions of SARS-CoV-2 nucleocapsid protein with nucleic acid

bioRxiv
2023 | Other
EID:

2-s2.0-85180400578

Part of ISSN: 26928205
Contributors: Zhao, H.; Syed, A.M.; Khalid, M.M.; Nguyen, A.; Ciling, A.; Wu, D.; Yau, W.-M.; Srinivasan, S.; Esposito, D.; Doudna, J.A. et al.
Source: Self-asserted source
Mir Mubashir Khalid via Scopus - Elsevier

Nuclear accumulation of host transcripts during Zika Virus Infection

PLoS Pathogens
2023 | Journal article
EID:

2-s2.0-85146532208

Part of ISSN: 15537374 15537366
Contributors: Leon, K.E.; Khalid, M.M.; Flynn, R.A.; Fontaine, K.A.; Nguyen, T.T.; Renuka Kumar, G.; Simoneau, C.R.; Tomar, S.; Jimenez-Morales, D.; Dunlap, M. et al.
Source: Self-asserted source
Mir Mubashir Khalid via Scopus - Elsevier

Previous exposure to Spike-providing parental strains confers neutralizing immunity to XBB lineage and other SARS-CoV-2 recombinants in the context of vaccination

Emerging Microbes and Infections
2023 | Journal article
EID:

2-s2.0-85175539142

Part of ISSN: 22221751
Contributors: Suryawanshi, R.K.; Taha, T.Y.; McCavitt-Malvido, M.; Silva, I.; Khalid, M.M.; Syed, A.M.; Chen, I.P.; Saldhi, P.; Sreekumar, B.; Montano, M. et al.
Source: Self-asserted source
Mir Mubashir Khalid via Scopus - Elsevier

Rapid assembly of SARS-CoV-2 genomes reveals attenuation of the Omicron BA.1 variant through NSP6

Nature Communications
2023 | Journal article
EID:

2-s2.0-85153546529

Part of ISSN: 20411723
Contributors: Taha, T.Y.; Chen, I.P.; Hayashi, J.M.; Tabata, T.; Walcott, K.; Kimmerly, G.R.; Syed, A.M.; Ciling, A.; Suryawanshi, R.K.; Martin, H.S. et al.
Source: Self-asserted source
Mir Mubashir Khalid via Scopus - Elsevier
grade
Preferred source (of 3)‎

SARS-CoV-2 Evolution Balances Conflicting Roles of N Protein Phosphorylation

SSRN
2023 | Other
EID:

2-s2.0-85162791335

Part of ISSN: 15565068
Contributors: Syed, A.M.; Ciling, A.; Chen, I.P.; Carlson, C.R.; Adly, A.; Martin, H.; Taha, T.Y.; Khalid, M.M.; Bouhaddou, M.; Ummadi, M.R. et al.
Source: Self-asserted source
Mir Mubashir Khalid via Scopus - Elsevier
grade
Preferred source (of 2)‎

SARS-CoV-2 infection of airway organoids reveals conserved use of Tetraspanin-8 by Ancestral, Delta, and Omicron variants

Stem Cell Reports
2023 | Journal article
EID:

2-s2.0-85149930838

Part of ISSN: 22136711
Contributors: Hysenaj, L.; Little, S.; Kulhanek, K.; Magnen, M.; Bahl, K.; Gbenedio, O.M.; Prinz, M.; Rodriguez, L.; Andersen, C.; Rao, A.A. et al.
Source: Self-asserted source
Mir Mubashir Khalid via Scopus - Elsevier

SARS-CoV-2 protein ORF8 limits expression levels of Spike antigen and facilitates immune evasion of infected host cells

Journal of Biological Chemistry
2023 | Journal article
EID:

2-s2.0-85166663584

Part of ISSN: 1083351X 00219258
Contributors: Kim, I.-J.; Lee, Y.-H.; Khalid, M.M.; Chen, I.P.; Zhang, Y.; Ott, M.; Verdin, E.
Source: Self-asserted source
Mir Mubashir Khalid via Scopus - Elsevier

Hepatitis C virus infects and perturbs liver stem cells

mBio
2023-12-19 | Journal article
Contributors: Nathan L. Meyers; Tal Ashuach; Danielle E. Lyons; Mir M. Khalid; Camille R. Simoneau; Ann L. Erickson; Mehdi Bouhaddou; Thong T. Nguyen; G. Renuka Kumar; Taha Y. Taha et al.
Source: check_circle
Crossref
grade
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Colloidal aggregation confounds cell-based Covid-19 antiviral screens

2023-10-30 | Preprint
Contributors: Isabella S. Glenn; Lauren N. Hall; Mir M. Khalid; Melanie Ott; Brian K. Shoichet
Source: check_circle
Crossref
grade
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Association of mannose-binding lectin 2 gene polymorphisms with Guillain-Barré syndrome

Scientific Reports
2022 | Journal article
EID:

2-s2.0-85127712270

Part of ISSN: 20452322
Contributors: Jahan, I.; Hayat, S.; Khalid, M.M.; Ahammad, R.U.; Asad, A.; Islam, B.; Mohammad, Q.D.; Jacobs, B.C.; Islam, Z.
Source: Self-asserted source
Mir Mubashir Khalid via Scopus - Elsevier

Limited cross-variant immunity from SARS-CoV-2 Omicron without vaccination

Nature
2022 | Journal article
EID:

2-s2.0-85133002818

Part of ISSN: 14764687 00280836
Contributors: Suryawanshi, R.K.; Chen, I.P.; Ma, T.; Syed, A.M.; Brazer, N.; Saldhi, P.; Simoneau, C.R.; Ciling, A.; Khalid, M.M.; Sreekumar, B. et al.
Source: Self-asserted source
Mir Mubashir Khalid via Scopus - Elsevier

Neutralizing antibody activity against SARS-CoV-2 variants in gestational age-matched mother-infant dyads after infection or vaccination

JCI Insight
2022 | Journal article
EID:

2-s2.0-85132455195

Part of ISSN: 23793708
Contributors: Matsui, Y.; Li, L.; Prahl, M.; Cassidy, A.G.; Ozarslan, N.; Golan, Y.; Gonzalez, V.J.; Lin, C.Y.; Jigmeddagva, U.; Chidboy, M.A. et al.
Source: Self-asserted source
Mir Mubashir Khalid via Scopus - Elsevier

Neutralizing immunity in vaccine breakthrough infections from the SARS-CoV-2 Omicron and Delta variants

medRxiv
2022 | Other
EID:

2-s2.0-85125183894

Contributors: Servellita, V.; Syed, A.M.; Brazer, N.; Saldhi, P.; Garcia-Knight, M.; Sreekumar, B.; Khalid, M.M.; Ciling, A.; Chen, P.-Y.; Kumar, G.R. et al.
Source: Self-asserted source
Mir Mubashir Khalid via Scopus - Elsevier
grade
Preferred source (of 3)‎

SARS-CoV-2 Infection of Lung Organoids Reveals Conserved Use of Tetraspanin-8 by Ancestral-, Delta-, and Omicron- Variants

SSRN
2022 | Other
EID:

2-s2.0-85177992963

Part of ISSN: 15565068
Contributors: Hysenaj, L.; Little, S.; Kulhanek, K.R.; Magnen, M.; Bahl, K.; Gbenedio, O.M.; Prinz, M.; Rodriguez, L.; Andersen, C.; Rao, A.A. et al.
Source: Self-asserted source
Mir Mubashir Khalid via Scopus - Elsevier

SARS-CoV-2 ORF8 limits expression levels of Spike antigen

bioRxiv
2022 | Other
EID:

2-s2.0-85146887884

Part of ISSN: 26928205
Contributors: Kim, I.-J.; Lee, Y.-H.; Khalid, M.M.; Zhang, Y.; Ott, M.; Verdin, E.
Source: Self-asserted source
Mir Mubashir Khalid via Scopus - Elsevier

Viral E protein neutralizes BET protein-mediated post-entry antagonism of SARS-CoV-2

Cell Reports
2022 | Journal article
EID:

2-s2.0-85134610990

Part of ISSN: 22111247
Contributors: Chen, I.P.; Longbotham, J.E.; McMahon, S.; Suryawanshi, R.K.; Khalid, M.M.; Taha, T.Y.; Tabata, T.; Hayashi, J.M.; Soveg, F.W.; Carlson-Stevermer, J. et al.
Source: Self-asserted source
Mir Mubashir Khalid via Scopus - Elsevier

NF-κB inhibitor alpha has a cross-variant role during SARS-CoV-2 infection in ACE2-overexpressing human airway organoids

2022-08-02 | Preprint
Contributors: Camille R. Simoneau; Pei-Yi Chen; Galen K. Xing; Mir M. Khalid; Nathan L. Meyers; Jennifer M. Hayashi; Taha Y. Taha; Kristoffer E. Leon; Tal Ashuach; Krystal A. Fontaine et al.
Source: check_circle
Crossref
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Preferred source (of 2)‎

Association of mannose-binding lectin 2 gene polymorphisms with Guillain-Barré syndrome

OpenAlex
2022-04-06 | Other
Contributors: Israt Jahan; Shoma Hayat; Mir Mubashir Khalid; Rijwan Uddin Ahammad; Asaduzzaman Asad; MD BADRUL ISLAM; Quazi Deen Mohammad; Olivier Scheidegger; Dr. Zhahirul Islam
Source: check_circle
DataCite
grade
Preferred source (of 3)‎

Limited Cross-Variant Immunity after Infection with the SARS-CoV-2 Omicron Variant Without Vaccination

2022-01-17 | Preprint
Contributors: Rahul K. Suryawanshi; Irene P Chen; Tongcui Ma; Abdullah M. Syed; Noah Brazer; Prachi Saldhi; Camille R Simoneau; Alison Ciling; Mir M. Khalid; Bharath Sreekumar et al.
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Neutralizing Antibody Activity Against SARS-CoV-2 Variants in Gestational Age-Matched Mother-Infant Dyads

medRxiv
2021 | Other
EID:

2-s2.0-85122720485

Contributors: Matsui, Y.; Li, L.; Prahl, M.; Cassidy, A.G.; Ozarslan, N.; Golan, Y.; Gonzalez, V.J.; Lin, C.Y.; Jigmeddagva, U.; Chidboy, M.A. et al.
Source: Self-asserted source
Mir Mubashir Khalid via Scopus - Elsevier

Sentinel cells enable genetic detection of SARS-CoV-2 Spike protein

bioRxiv
2021 | Other
EID:

2-s2.0-85106385722

Part of ISSN: 26928205
Contributors: Weinberg, Z.Y.; Hilburger, C.E.; Kim, M.; Cao, L.; Khalid, M.; Elmes, S.; Diwanji, D.; Hernandez, E.; Lopez, J.; Schaefer, K. et al.
Source: Self-asserted source
Mir Mubashir Khalid via Scopus - Elsevier

Transmission, infectivity, and antibody neutralization of an emerging SARS-CoV-2 variant in California carrying a L452R spike protein mutation

medRxiv
2021 | Other
EID:

2-s2.0-85104655001

Contributors: Deng, X.; Garcia-Knight, M.A.; Khalid, M.M.; Servellita, V.; Wang, C.; Morris, M.K.; Sotomayor-González, A.; Glasner, D.R.; Reyes, K.R.; Gliwa, A.S. et al.
Source: Self-asserted source
Mir Mubashir Khalid via Scopus - Elsevier

Transmission, infectivity, and neutralization of a spike L452R SARS-CoV-2 variant

Cell
2021 | Journal article
EID:

2-s2.0-85105784011

Part of ISSN: 10974172 00928674
Contributors: Deng, X.; Garcia-Knight, M.A.; Khalid, M.M.; Servellita, V.; Wang, C.; Morris, M.K.; Sotomayor-González, A.; Glasner, D.R.; Reyes, K.R.; Gliwa, A.S. et al.
Source: Self-asserted source
Mir Mubashir Khalid via Scopus - Elsevier

Rapid assessment of SARS-CoV-2–evolved variants using virus-like particles

Science
2021-12-24 | Journal article
Contributors: Abdullah M. Syed; Taha Y. Taha; Takako Tabata; Irene P. Chen; Alison Ciling; Mir M. Khalid; Bharath Sreekumar; Pei-Yi Chen; Jennifer M. Hayashi; Katarzyna M. Soczek et al.
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Omicron mutations enhance infectivity and reduce antibody neutralization of SARS-CoV-2 virus-like particles

2021-12-21 | Preprint
Contributors: Abdullah M. Syed; Alison Ciling; Mir M. Khalid; Bharath Sreekumar; Pei-Yi Chen; G. Renuka Kumar; Ines Silva; Bilal Milbes; Noah Kojima; Victoria Hess et al.
Source: check_circle
Crossref
grade
Preferred source (of 5)‎

Rapid assessment of SARS-CoV-2 evolved variants using virus-like particles

2021-08-05 | Other
Contributors: Abdullah M. Syed; Taha Y. Taha; Mir M. Khalid; Takako Tabata; Irene P. Chen; Bharath Sreekumar; Pei-Yi Chen; Jennifer M. Hayashi; Katarzyna M. Soczek; Melanie Ott et al.
Source: check_circle
Crossref
grade
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Zika virus infection prevents host mRNA nuclear export by disrupting UPF1 function

bioRxiv
2020 | Other
EID:

2-s2.0-85099901070

Part of ISSN: 26928205
Contributors: Leon, K.; Flynn, R.; Khalid, M.M.; Fontaine, K.A.; Nguyen, T.; Kumar, G.R.; Simoneau, C.R.; Tomar, S.; Jimenez-Morales, D.; Dunlap, M. et al.
Source: Self-asserted source
Mir Mubashir Khalid via Scopus - Elsevier

Comparative host-coronavirus protein interaction networks reveal pan-viral disease mechanisms

Science
2020-10-15 | Journal article
EID:

2-s2.0-85097210203

Part of ISSN: 10959203 00368075
Source: Self-asserted source
Mir Mubashir Khalid
grade
Preferred source (of 2)‎

Crosstalk between RNA Pol II C-Terminal Domain Acetylation and Phosphorylation via RPRD Proteins

Molecular Cell
2019-05-01 | Journal article
EID:

2-s2.0-85067275080

Part of ISSN: 10974164 10972765
EID:

2-s2.0-85093614423

Part of ISSN: 26928205
Source: Self-asserted source
Mir Mubashir Khalid
grade
Preferred source (of 3)‎

Human liver organoids; a patient-derived primary model for HBV Infection and Related Hepatocellular Carcinoma

bioRxiv
2019-03-05 | Journal article
Source: Self-asserted source
Mir Mubashir Khalid
grade
Preferred source (of 4)‎

Toll‐like receptor‐4 299Gly allele is associated with Guillain‐Barré syndrome in Bangladesh

Annals of Clinical and Translational Neurology
2019-03-03 | Journal article
Source: Self-asserted source
Mir Mubashir Khalid
grade
Preferred source (of 2)‎

The Cellular NMD Pathway Restricts Zika Virus Infection and Is Targeted by the Viral Capsid Protein

mBio
2018-11-06 | Journal article
EID:

2-s2.0-85095653642

Part of ISSN: 26928205
EID:

2-s2.0-85056275539

Part of ISSN: 21507511 21612129
Source: Self-asserted source
Mir Mubashir Khalid
grade
Preferred source (of 3)‎

CD1A and CD1E gene polymorphisms are not associated with susceptibility to Guillain-Barré syndrome in the Bangladeshi population

Journal of Neuroimmunology
2018-01-15 | Journal article
EID:

2-s2.0-85037104761

Part of ISSN: 18728421 01655728
Source: Self-asserted source
Mir Mubashir Khalid
grade
Preferred source (of 2)‎

Tumor necrosis factor-alpha -863C/A polymorphism is associated with Guillain–Barré syndrome in Bangladesh

Journal of Neuroimmunology
2017-09-15 | Journal article
SOURCE-WORK-ID: 0626171735869-7
EID:

2-s2.0-85021194830

Part of ISSN: 18728421 01655728
Source: Self-asserted source
Mir Mubashir Khalid
grade
Preferred source (of 3)‎

Guillain-Barre syndrome in Bangladesh: The role TLR4 Asp299Gly and Thr399Ile polymorphisms

International Journal of Infectious Diseases
2016 | Journal article
WOSUID:

WOS:000374876700091

Contributors: Jahan, I.; Ahammad, R. U.; Khalid, M. M.; Sarker, S. K.; Islam, M. B.; Endtz, H. P.; Islam, Z.
Source: Self-asserted source
Mir Mubashir Khalid via ResearcherID

INTERLEUKIN-10 PROMOTER POLYMORPHISMS IN PATIENTS WITH GUILLAIN-BARRE SYNDROME IN BANGLADESH

Journal of the Peripheral Nervous System
2016 | Journal article
WOSUID:

WOS:000383856200073

Contributors: Jahan, I; Rahman, I; Ahmed, R. U.; Khalid, M. M.; Maria, H.; Islam, Z.
Source: Self-asserted source
Mir Mubashir Khalid via ResearcherID

Small Molecule Inhibitors of BAF; A Promising Family of Compounds in HIV-1 Latency Reversal

Source: Self-asserted source
Mir Mubashir Khalid
grade
Preferred source (of 5)‎

THE ROLE OF TNF-alpha GENETIC POLYMORPHISMS IN PATIENTS WITH GUILLAIN-BARRE SYNDROME IN BANGLADESH

Journal of the Peripheral Nervous System
2015 | Journal article
WOSUID:

WOS:000360214600196

Contributors: Jahan, I; Ahammad, R. U.; Farzana, K. S.; Khalid, M. M.; Sarker, S. K.; Islam, B.; Kabir, Y.; Islam, Z.
Source: Self-asserted source
Mir Mubashir Khalid via ResearcherID

MANNOSE-BINDING LECTIN GENE-2 POLYMORPHISMS ASSOCIATED WITH SUSCEPTIBILITY AND SEVERITY OF GUILLAIN-BARRE SYNDROME: NEW EVIDENCE AND META-ANALYSIS

Journal of the Peripheral Nervous System
2014 | Journal article
WOSUID:

WOS:000348453500053

Contributors: Islam, Z.; Khalid, M. M.; Ahammad, R. U.; Farzana, K. S.; Sarker, S. K.; Islam, M. B.; van Rijs, W.; Geleijns, K.; Mohmmad, Q. D.; Endtz, H. P. et al.
Source: Self-asserted source
Mir Mubashir Khalid via ResearcherID

GUILLAIN-BARRE SYNDROME IN BANGLADESH: THE ROLE OF MANNOSE-BINDING LECTIN GENE-2 POLYMORPHISMS

Journal of the Peripheral Nervous System
2013 | Journal article
WOSUID:

WOS:000320620200130

Contributors: Islam, Z.; Khalid, M. M.; Ahammad, R. U.; Farzana, K. S.; Sarker, S. K.; Islam, M. B.; van Rijs, W.; Geleijns, K.; Mohmmad, Q. D.; Jacobs, B. C. et al.
Source: Self-asserted source
Mir Mubashir Khalid via ResearcherID

Peer review (4 reviews for 1 publication/grant)

Review activity for STAR protocols. (4)