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Kitasato University: Sagamihara, Kanabawa, JP

2012-04-01 to 2024-03-31 (Osaka University)
Employment
Source: Self-asserted source
Tomoki Matsuda

Works (17)

High-affinity tuning of single fluorescent protein-type indicators by flexible linker length optimization in topology mutant

Communications Biology
2024-06-08 | Journal article
DOI: 10.1038/s42003-024-06394-0
Contributors: Yusuke Hara; Aya Ichiraku; Tomoki Matsuda; Ayuko Sakane; Takuya Sasaki; Takeharu Nagai; Kazuki Horikawa
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Crossref

Selective-plane-activation structured illumination microscopy

Nature Methods
2024-05 | Journal article
DOI: 10.1038/s41592-024-02236-3
Contributors: Kenta Temma; Ryosuke Oketani; Toshiki Kubo; Kazuki Bando; Shunsuke Maeda; Kazunori Sugiura; Tomoki Matsuda; Rainer Heintzmann; Tatsuya Kaminishi; Koki Fukuda et al.
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Crossref

Visualization of trans-interactions of a protocadherin-α between processes originating from single neurons.

iScience
2023-07-17 | Journal article
DOI: 10.1016/j.isci.2023.107238
PMID: 37534169
PMC: PMC10392085
Contributors: Kanadome T; Natsumi Hoshino; Nagai T; Yagi T; Matsuda T
Source: Self-asserted source
Tomoki Matsuda

Development of intensiometric indicators for visualizing N-cadherin interaction across cells

Communications Biology
2022-10-07 | Journal article
DOI: 10.1038/s42003-022-04023-2
Contributors: Takashi Kanadome; Kanehiro Hayashi; Yusuke Seto; Mototsugu Eiraku; Kazunori Nakajima; Takeharu Nagai; Tomoki Matsuda
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Crossref

Fluorescence Imaging of Extracellular Potassium Ion Using Potassium Sensing Oligonucleotide

Frontiers in Chemistry
2022-07-08 | Journal article
DOI: 10.3389/fchem.2022.922094
Part of ISSN: 2296-2646
Contributors: Shinobu Sato; Shinsuke Ohzawa; Kojiro Sota; Naoto Sakamoto; Ayano Udo; Shinji Sueda; Tomoki Matsuda; Takeharu Nagai; Shigeori Takenaka
Source: Self-asserted source
Tomoki Matsuda

Structure‐based analysis and evolution of a monomerized red‐colored chromoprotein from the Olindias formosa jellyfish

Protein Science
2022-05 | Journal article
DOI: 10.1002/pro.4285
Part of ISSN: 0961-8368
Part of ISSN: 1469-896X
Contributors: Le Zhai; Ryosuke Nakashima; Hajime Shinoda; Yoshimasa Ike; Tomoki Matsuda; Takeharu Nagai
Source: Self-asserted source
Tomoki Matsuda

Development of FRET-based indicators for visualizing homophilic trans interaction of a clustered protocadherin

Scientific Reports
2021-11-15 | Journal article
DOI: 10.1038/s41598-021-01481-2
Part of ISSN: 2045-2322
Contributors: Takashi Kanadome; Natsumi Hoshino; Takeharu Nagai; Tomoki Matsuda; Takeshi Yagi
Source: Self-asserted source
Tomoki Matsuda

Stepwise synaptic plasticity events drive the early phase of memory consolidation

Science
2021-11-12 | Journal article
DOI: 10.1126/science.abj9195
Contributors: Akihiro Goto; Ayaka Bota; Ken Miya; Jingbo Wang; Suzune Tsukamoto; Xinzhi Jiang; Daichi Hirai; Masanori Murayama; Tomoki Matsuda; Thomas J. McHugh et al.
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Crossref

Ratiometric Bioluminescent Indicator for a Simple and Rapid Measurement of Thrombin Activity Using a Smartphone

Analytical Chemistry
2021-10-12 | Journal article
DOI: 10.1021/acs.analchem.1c02396
Part of ISSN: 0003-2700
Part of ISSN: 1520-6882
Contributors: Mitsuru Hattori; Nae Sugiura; Tetsuichi Wazawa; Tomoki Matsuda; Takeharu Nagai
Source: Self-asserted source
Tomoki Matsuda

Visible-Wavelength Multiphoton Activation Confocal Microscopy

ACS Photonics
2021-09-15 | Journal article
DOI: 10.1021/acsphotonics.1c00685
Part of ISSN: 2330-4022
Part of ISSN: 2330-4022
Contributors: Toshiki Kubo; Kenta Temma; Kazunori Sugiura; Hajime Shinoda; Kai Lu; Nicholas Isaac Smith; Tomoki Matsuda; Takeharu Nagai; Katsumasa Fujita
Source: Self-asserted source
Tomoki Matsuda

Hyperspectral two-photon excitation microscopy using visible wavelength

Optics Letters
2021-01-01 | Journal article
DOI: 10.1364/ol.413526
Part of ISSN: 0146-9592
Part of ISSN: 1539-4794
Contributors: Toshiki Kubo; Kenta Temma; Nicholas I. Smith; Kai Lu; Tomoki Matsuda; Takeharu Nagai; Katsumasa Fujita
Source: Self-asserted source
Tomoki Matsuda

Hierarchical Development of Motile Polarity in Durotactic Cells Just Crossing an Elasticity Boundary

Cell Structure and Function
2020 | Journal article
DOI: 10.1247/csf.19040
Part of ISSN: 0386-7196
Part of ISSN: 1347-3700
Contributors: Thasaneeya Kuboki; Hiroyuki Ebata; Tomoki Matsuda; Yoshiyuki Arai; Takeharu Nagai; Satoru Kidoaki
Source: Self-asserted source
Tomoki Matsuda

Smartphone-Based Portable Bioluminescence Imaging System Enabling Observation at Various Scales from Whole Mouse Body to Organelle

Sensors
2020-12-14 | Journal article
DOI: 10.3390/s20247166
Part of ISSN: 1424-8220
Contributors: Mitsuru Hattori; Sumito Shirane; Tomoki Matsuda; Kuniaki Nagayama; Takeharu Nagai
Source: Self-asserted source
Tomoki Matsuda

LC3 lipidation is essential for TFEB activation during the lysosomal damage response to kidney injury

Nature Cell Biology
2020-10 | Journal article
DOI: 10.1038/s41556-020-00583-9
Part of ISSN: 1465-7392
Part of ISSN: 1476-4679
Contributors: Shuhei Nakamura; Saki Shigeyama; Satoshi Minami; Takayuki Shima; Shiori Akayama; Tomoki Matsuda; Alessandra Esposito; Gennaro Napolitano; Akiko Kuma; Tomoko Namba-Hamano et al.
Source: Self-asserted source
Tomoki Matsuda

Bioluminescent Ratiometric Indicator for Analysis of Water Hardness in Household Water

Sensors
2020-06-02 | Journal article
DOI: 10.3390/s20113164
Part of ISSN: 1424-8220
Contributors: Md Nadim Hossain; Ryuichi Ishida; Mitsuru Hattori; Tomoki Matsuda; Takeharu Nagai
Source: Self-asserted source
Tomoki Matsuda

Palmitoylated CKAP4 regulates mitochondrial functions through an interaction with VDAC2 at ER–mitochondria contact sites

Journal of Cell Science
2020-01-01 | Journal article
DOI: 10.1242/jcs.249045
Part of ISSN: 1477-9137
Part of ISSN: 0021-9533
Contributors: Takeshi Harada; Ryota Sada; Yoshito Osugi; Shinji Matsumoto; Tomoki Matsuda; Mitsuko Hayashi-Nishino; Takeharu Nagai; Akihiro Harada; Akira Kikuchi
Source: Self-asserted source
Tomoki Matsuda

Visible-wavelength two-photon excitation microscopy with multifocus scanning for volumetric live-cell imaging

Journal of Biomedical Optics
2019-11-05 | Journal article
DOI: 10.1117/1.jbo.25.1.014502
Part of ISSN: 1083-3668
Contributors: Ryosuke Oketani; Haruka Suda; Kumiko Uegaki; Toshiki Kubo; Tomoki Matsuda; Masahito Yamanaka; Yoshiyuki Arai; Nicholas I. Smith; Takeharu Nagai; Katsumasa Fujita
Source: Self-asserted source
Tomoki Matsuda

Peer review (1 review for 1 publication/grant)

Review activity for Communications biology. (1)
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