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Thioguanosine conversion enables mRNA life‐time evaluation by RNA sequencing via double metabolic labeling

Angewandte Chemie
2020-01 | Journal article
DOI: 10.1002/ange.201916272
Part of ISSN: 0044-8249
Contributors: Catherina Gasser; Isabel Delazer; Eva Neuner; Katharina Pascher; Karl Brillet; Sarah Klotz; Lukas Trixl; Maximilian Himmelstoß; Eric Ennifar; Dietmar Rieder et al.
Source: Self-asserted source
Alexandra Lusser via Crossref Metadata Search

Phosphorylation of Drosophila CENP-A on serine 20 regulates protein turn-over and centromere-specific loading

Nucleic Acids Research
2019-11-18 | Journal article
DOI: 10.1093/nar/gkz809
Contributors: Anming Huang; Leopold Kremser; Fabian Schuler; Doris Wilflingseder; Herbert Lindner; Stephan Geley; Alexandra Lusser
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Publisher Correction: RNA modification: Getting a hold on cytosine methylation in mRNA

Nature Structural & Molecular Biology
2019-06-14 | Journal article
DOI: 10.1038/s41594-019-0247-5
Contributors: Lukas Trixl; Alexandra Lusser
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Getting a hold on cytosine methylation in mRNA

Nature Structural & Molecular Biology
2019-05-06 | Journal article
DOI: 10.1038/s41594-019-0217-y
Contributors: Lukas Trixl; Alexandra Lusser
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The dynamic RNA modification 5‐methylcytosine and its emerging role as an epitranscriptomic mark

WIREs RNA
2019-01 | Journal article
DOI: 10.1002/wrna.1510
Contributors: Lukas Trixl; Alexandra Lusser
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Crossref

Role for Chromatin Remodeling Factor Chd1 in Learning and Memory.

Frontiers in molecular neuroscience
2019-01-23 | Journal article
DOI: 10.3389/fnmol.2019.00003
PMID: 30728766
PMC: PMC6351481
Source: Self-asserted source
Alexandra Lusser

Bisulfite Sequencing of RNA for Transcriptome-Wide Detection of 5-Methylcytosine.

Methods in molecular biology (Clifton, N.J.)
2019-01-01 | Journal article
DOI: 10.1007/978-1-4939-8808-2_1
PMID: 30539543
Source: Self-asserted source
Alexandra Lusser

Superior cellular activities of azido- over amino-functionalized ligands for engineered preQ1 riboswitches in E.coli.

RNA biology
2018-10-26 | Journal article
DOI: 10.1080/15476286.2018.1534526
PMID: 30332908
PMC: PMC6284575
Source: Self-asserted source
Alexandra Lusser
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Modification of the histone tetramer at the H3-H3 interface impacts tetrasome conformations and dynamics.

The Journal of chemical physics
2018-03-01 | Journal article
DOI: 10.1063/1.5009100
PMID: 29604863
Source: Self-asserted source
Alexandra Lusser

RNA Methylation

Methods in Molecular Biology
2017 | Book
DOI: 10.1007/978-1-4939-6807-7
Contributors: Alexandra Lusser
Source: Self-asserted source
Alexandra Lusser via Crossref Metadata Search

Distinct 5-methylcytosine profiles in poly(A) RNA from mouse embryonic stem cells and brain

Genome Biology
2017-12 | Journal article
DOI: 10.1186/s13059-016-1139-1
Contributors: Thomas Amort; Dietmar Rieder; Alexandra Wille; Daria Khokhlova-Cubberley; Christian Riml; Lukas Trixl; Xi-Yu Jia; Ronald Micura; Alexandra Lusser
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RNA cytosine methyltransferase Nsun3 regulates embryonic stem cell differentiation by promoting mitochondrial activity

Cellular and Molecular Life Sciences
2017-11-04 | Journal article
DOI: 10.1007/s00018-017-2700-0
Contributors: Lukas Trixl; Thomas Amort; Alexandra Wille; Manuela Zinni; Susanne Ebner; Clara Hechenberger; Felix Eichin; Hanna Gabriel; Ines Schoberleitner; Anming Huang et al.
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Crossref

Osmium‐Mediated Transformation of 4‐Thiouridine to Cytidine as Key To Study RNA Dynamics by Sequencing

Angewandte Chemie
2017-10-16 | Journal article
DOI: 10.1002/ange.201707465
Contributors: Christian Riml; Thomas Amort; Dietmar Rieder; Catherina Gasser; Alexandra Lusser; Ronald Micura
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Osmium‐Mediated Transformation of 4‐Thiouridine to Cytidine as Key To Study RNA Dynamics by Sequencing

Angewandte Chemie International Edition
2017-10-16 | Journal article
DOI: 10.1002/anie.201707465
Contributors: Christian Riml; Thomas Amort; Dietmar Rieder; Catherina Gasser; Alexandra Lusser; Ronald Micura
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Detection of 5-Methylcytosine in Specific Poly(A) RNAs by Bisulfite Sequencing.

Methods in molecular biology (Clifton, N.J.)
2017-01-01 | Journal article
DOI: 10.1007/978-1-4939-6807-7_8
PMID: 28349457
Source: Self-asserted source
Alexandra Lusser

Transcriptome-Wide Detection of 5-Methylcytosine by Bisulfite Sequencing.

Methods in molecular biology (Clifton, N.J.)
2017-01-01 | Journal article
DOI: 10.1007/978-1-4939-6807-7_9
PMID: 28349458
Source: Self-asserted source
Alexandra Lusser

Changes in the miRNA-mRNA Regulatory Network Precede Motor Symptoms in a Mouse Model of Multiple System Atrophy: Clinical Implications.

2016 | Journal article
DOI: 10.1371/journal.pone.0150705
PMID: 26962858
PMC: PMC4786272
Contributors: Schafferer S; Khurana R; Refolo V; Venezia S; Sturm E; Piatti P; Hechenberger C; Hackl H; Kessler R; Willi M et al.
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central

Impact of the Chromatin Remodeling Factor CHD1 on Gut Microbiome Composition of Drosophila melanogaster.

2016 | Journal article
DOI: 10.1371/journal.pone.0153476
PMID: 27093431
PMC: PMC4836739
Contributors: Sebald J; Willi M; Schoberleitner I; Krogsdam A; Orth-Höller D; Trajanoski Z; Lusser A
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central

Recent insights from in vitro single-molecule studies into nucleosome structure and dynamics.

Biophysical reviews
2016-10-18 | Journal article
DOI: 10.1007/s12551-016-0212-z
PMID: 28058066
PMC: PMC5167136
Source: Self-asserted source
Alexandra Lusser

Dysregulation of select ATP-dependent chromatin remodeling factors in high trait anxiety

Behavioural Brain Research
2016-09 | Journal article
DOI: 10.1016/j.bbr.2016.05.036
Contributors: Alexandra Wille; Thomas Amort; Nicolas Singewald; Simone B. Sartori; Alexandra Lusser
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A novel role for the histone acetyltransferase Hat1 in the CENP-A/CID assembly pathway in Drosophila melanogaster.

2016-03 | Journal article
DOI: 10.1093/nar/gkv1235
PMID: 26586808
PMC: PMC4797270
Contributors: Boltengagen M; Huang A; Boltengagen A; Trixl L; Lindner H; Kremser L; Offterdinger M; Lusser A
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central

meRanTK: methylated RNA analysis ToolKit.

2016-03 | Journal article
DOI: 10.1093/bioinformatics/btv647
PMID: 26543174
Contributors: Rieder D; Amort T; Kugler E; Lusser A; Trajanoski Z
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central
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Investigating the Handedness Dynamics of Tetrasomes

Biophysical Journal
2016-02 | Journal article
DOI: 10.1016/j.bpj.2015.11.3007
Contributors: Orkide Ordu; Rifka Vlijm; Mina Lee; Alexandra Lusser; Cees Dekker; Nynke H. Dekker
Source: Self-asserted source
Alexandra Lusser via Crossref Metadata Search

Comparing the Assembly and Handedness Dynamics of (H3.3-H4)2 Tetrasomes to Canonical Tetrasomes.

2015 | Journal article
DOI: 10.1371/journal.pone.0141267
PMID: 26506534
PMC: PMC4623960
Contributors: Vlijm R; Lee M; Ordu O; Boltengagen A; Lusser A; Dekker NH; Dekker C
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central

Impaired Contextual Fear Extinction Learning is Associated with Aberrant Regulation of CHD-Type Chromatin Remodeling Factors.

2015 | Journal article
DOI: 10.3389/fnbeh.2015.00313
PMID: 26635563
PMC: PMC4649039
Contributors: Wille A; Maurer V; Piatti P; Whittle N; Rieder D; Singewald N; Lusser A
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central
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Dynamics of nucleosomal structures measured by high-speed atomic force microscopy.

2015-02 | Journal article
DOI: 10.1002/smll.201401318
PMID: 25336288
Contributors: Katan AJ; Vlijm R; Lusser A; Dekker C
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central
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Embryonic stem cell differentiation requires full length Chd1

Scientific Reports
2015-01 | Journal article
DOI: 10.1038/srep08007
Contributors: Paolo Piatti; Chin Yan Lim; Roxana Nat; Andreas Villunger; Stephan Geley; Yan Ting Shue; Claudia Soratroi; Markus Moser; Alexandra Lusser
Source: Self-asserted source
Alexandra Lusser via Crossref Metadata Search

Nucleosome assembly dynamics involve spontaneous fluctuations in the handedness of tetrasomes.

2015-01 | Journal article
DOI: 10.1016/j.celrep.2014.12.022
PMID: 25578730
Contributors: Vlijm R; Lee M; Lipfert J; Lusser A; Dekker C; Dekker NH
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central

Differential neuronal targeting of a new and two known calcium channel β4 subunit splice variants correlates with their regulation of gene expression.

2014-01 | Journal article
DOI: 10.1523/jneurosci.3935-13.2014
PMID: 24453333
PMC: PMC3898300
Contributors: Etemad S; Obermair GJ; Bindreither D; Benedetti A; Stanika R; Di Biase V; Burtscher V; Koschak A; Kofler R; Geley S et al.
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central

Long non-coding RNAs as targets for cytosine methylation.

2013-06 | Journal article
DOI: 10.4161/rna.24454
PMID: 23595112
PMC: PMC4111728
Contributors: Amort T; Soulière MF; Wille A; Jia XY; Fiegl H; Wörle H; Micura R; Lusser A
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central
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CHD1 contributes to intestinal resistance against infection by P. aeruginosa in Drosophila melanogaster.

2012 | Journal article
DOI: 10.1371/journal.pone.0043144
PMID: 22912810
PMC: PMC3418260
Contributors: Sebald J; Morettini S; Podhraski V; Lass-Flörl C; Lusser A
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central

NAP1-assisted nucleosome assembly on DNA measured in real time by single-molecule magnetic tweezers.

2012 | Journal article
DOI: 10.1371/journal.pone.0046306
PMID: 23050009
PMC: PMC3457989
Contributors: Vlijm R; Smitshuijzen JS; Lusser A; Dekker C
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central
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Non-destructive species identification of Drosophila obscura and D. subobscura (Diptera) using near-infrared spectroscopy.

2012 | Journal article
DOI: 10.4161/fly.21535
PMID: 22885252
PMC: PMC3519663
Contributors: Fischnaller S; Dowell FE; Lusser A; Schlick-Steiner BC; Steiner FM
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central

Chromatin Dynamics and Higher-Order Chromatin Organization

Encyclopedia of Molecular Cell Biology and Molecular Medicine
2012-05 | Other
DOI: 10.1002/3527600906.mcb.201100027
Contributors: Anette Zeilner; Paolo Piatti; Alexandra Lusser
Source: Self-asserted source
Alexandra Lusser via Crossref Metadata Search

ATP-dependent chromatin remodeling factors and their roles in affecting nucleosome fiber composition.

2011 | Journal article
DOI: 10.3390/ijms12106544
PMID: 22072904
PMC: PMC3210995
Contributors: Piatti P; Zeilner A; Lusser A
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central

The chromodomains of CHD1 are critical for enzymatic activity but less important for chromatin localization.

2011-04 | Journal article
DOI: 10.1093/nar/gkq1298
PMID: 21177652
PMC: PMC3082874
Contributors: Morettini S; Tribus M; Zeilner A; Sebald J; Campo-Fernandez B; Scheran G; Wörle H; Podhraski V; Fyodorov DV; Lusser A
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central

CenH3/CID incorporation is not dependent on the chromatin assembly factor CHD1 in Drosophila.

2010 | Journal article
DOI: 10.1371/journal.pone.0010120
PMID: 20396651
PMC: PMC2852906
Contributors: Podhraski V; Campo-Fernandez B; Wörle H; Piatti P; Niederegger H; Böck G; Fyodorov DV; Lusser A
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central

ATP-dependent chromatin remodeling enzymes and their various roles in cell cycle control.

2008 | Journal article
DOI: 10.2741/3096
PMID: 18508602
Contributors: Morettini S; Podhraski V; Lusser A
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central

CHD1 motor protein is required for deposition of histone variant H3.3 into chromatin in vivo.

2007-08 | Journal article
DOI: 10.1126/science.1145339
PMID: 17717186
PMC: PMC3014568
Contributors: Konev AY; Tribus M; Park SY; Podhraski V; Lim CY; Emelyanov AV; Vershilova E; Pirrotta V; Kadonaga JT; Lusser A et al.
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central

Distinct activities of CHD1 and ACF in ATP-dependent chromatin assembly.

2005-02 | Journal article
DOI: 10.1038/nsmb884
PMID: 15643425
Contributors: Lusser A; Urwin DL; Kadonaga JT
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central
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Strategies for the reconstitution of chromatin.

2004-10 | Journal article
DOI: 10.1038/nmeth709
PMID: 15789029
Contributors: Lusser A; Kadonaga JT
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central
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A conserved N-terminal motif in Rad54 is important for chromatin remodeling and homologous strand pairing.

2004-06 | Journal article
DOI: 10.1074/jbc.m402648200
PMID: 15105430
Contributors: Alexiadis V; Lusser A; Kadonaga JT
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central

Chromatin remodeling by ATP-dependent molecular machines.

2003-12 | Journal article
DOI: 10.1002/bies.10359
PMID: 14635254
Contributors: Lusser A; Kadonaga JT
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central
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Regulation and processing of maize histone deacetylase Hda1 by limited proteolysis.

2003-08 | Journal article
DOI: 10.1105/tpc.013995
PMID: 12897261
Contributors: Pipal A; Goralik-Schramel M; Lusser A; Lanzanova C; Sarg B; Loidl A; Lindner H; Rossi V; Loidl P
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central

A maize histone deacetylase and retinoblastoma-related protein physically interact and cooperate in repressing gene transcription.

2003-02 | Journal article
DOI: 10.1023/a:1022090916446
PMID: 12602870
Contributors: Rossi V; Locatelli S; Lanzanova C; Boniotti MB; Varotto S; Pipal A; Goralik-Schramel M; Lusser A; Gatz C; Gutierrez C et al.
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central

Molecular identification of PpHDAC1, the first histone deacetylase fron the slime mold Physarum polycephalum.

2002 | Journal article
DOI: 10.1016/s1065-6995(02)90933-9
PMID: 12377210
Contributors: Brandtner EM; Lechner T; Loidl P; Lusser A
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central

Acetylated, methylated, remodeled: chromatin states for gene regulation.

2002-10 | Journal article
DOI: 10.1016/s1369-5266(02)00287-x
PMID: 12183183
Contributors: Lusser A
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central

Comparative analysis of HD2 type histone deacetylases in higher plants.

2001-06 | Journal article
DOI: 10.1007/s004250000506
PMID: 11469594
Contributors: Dangl M; Brosch G; Haas H; Loidl P; Lusser A
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central

Histone acetylation: lessons from the plant kingdom.

2001-02 | Journal article
DOI: 10.1016/s1360-1385(00)01839-2
PMID: 11173289
Contributors: Lusser A; Kölle D; Loidl P
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central
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RPD3-type histone deacetylases in maize embryos.

2000-02 | Journal article
DOI: 10.1021/bi9918184
PMID: 10677216
Contributors: Lechner T; Lusser A; Pipal A; Brosch G; Loidl A; Goralik-Schramel M; Sendra R; Wegener S; Walton JD; Loidl P
Source: Self-asserted source
Alexandra Lusser via Europe PubMed Central
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