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Echidna: integrated simulations of single-cell immune receptor repertoires and transcriptomes

Bioinformatics Advances
2022-01-10 | Journal article
Contributors: Jiami Han; Solène Masserey; Danielle Shlesinger; Raphael Kuhn; Chrysa Papadopoulou; Andreas Agrafiotis; Victor Kreiner; Raphael Dizerens; Kai-Lin Hong; Cédric Weber et al.
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Platypus: an open-access software for integrating lymphocyte single-cell immune repertoires with transcriptomes

NAR Genomics and Bioinformatics
2021-04-09 | Journal article
Contributors: Alexander Yermanos; Andreas Agrafiotis; Raphael Kuhn; Damiano Robbiani; Josephine Yates; Chrysa Papadopoulou; Jiami Han; Ioana Sandu; Cédric Weber; Florian Bieberich et al.
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