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Works (50)

Intestinal dual-specificity phosphatase 6 regulates the cold-induced gut microbiota remodeling to promote white adipose browning

npj Biofilms and Microbiomes
2024-03-13 | Journal article
Contributors: Pei-Chen Chen; Tzu-Pei Tsai; Yi-Chu Liao; Yu-Chieh Liao; Hung-Wei Cheng; Yi-Hsiu Weng; Chiao-Mei Lin; Cheng-Yuan Kao; Chih-Cheng Tai; Jhen-Wei Ruan
Source: check_circle
Crossref

Cost-effective complete genome sequencing using the MinION platform for identification of recombinant enteroviruses

Microbiology Spectrum
2023-12-12 | Journal article
Contributors: Yeh-Sheng Chien; Feng-Jui Chen; Han-Chieh Wu; Chieh-Hua Lin; Wen-Chiung Chang; David Perera; Jyh-Yuan Yang; Min-Shi Lee; Yu-Chieh Liao; Day-Yu Chao et al.
Source: check_circle
Crossref

Rapid and Routine Molecular Typing Using Multiplex Polymerase Chain Reaction and MinION Sequencer

Frontiers in Microbiology
2022 | Journal article
EID:

2-s2.0-85128468757

Part of ISSN: 1664302X
Contributors: Liao, Y.-C.; Wu, H.-C.; Liou, C.-H.; Lauderdale, T.-L.Y.; Huang, I.-W.; Lai, J.-F.; Chen, F.-J.
Source: Self-asserted source
Yu-Chieh Liao via Scopus - Elsevier

Comparative pan-genome analysis of oral veillonella species

Microorganisms
2021 | Journal article
EID:

2-s2.0-85113757454

Part of ISSN: 20762607
Contributors: Mashima, I.; Liao, Y.-C.; Lin, C.-H.; Nakazawa, F.; Haase, E.M.; Kiyoura, Y.; Scannapieco, F.A.
Source: Self-asserted source
Yu-Chieh Liao via Scopus - Elsevier

Identification of a gut microbiota member that ameliorates DSS-induced colitis in intestinal barrier enhanced Dusp6-deficient mice

Cell Reports
2021 | Journal article
EID:

2-s2.0-85119438955

Part of ISSN: 22111247
Contributors: Chang, C.-S.; Liao, Y.-C.; Huang, C.-T.; Lin, C.-M.; Cheung, C.H.Y.; Ruan, J.-W.; Yu, W.-H.; Tsai, Y.-T.; Lin, I.-J.; Huang, C.-H. et al.
Source: Self-asserted source
Yu-Chieh Liao via Scopus - Elsevier

Mobile resistomes of human pathogens in swine wastewater treatment plants

Journal of Microbiology, Immunology and Infection
2021 | Journal article
EID:

2-s2.0-85113730586

Part of ISSN: 19959133 16841182
Contributors: Kuo, H.-C.; Liao, Y.-C.; Cheng, H.-W.; Shih, S.-M.; Chen, F.-J.; Kuo, S.-C.
Source: Self-asserted source
Yu-Chieh Liao via Scopus - Elsevier

Susceptibility of Elizabethkingia spp. To commonly tested and novel antibiotics and concordance between broth microdilution and automated testing methods

Journal of Antimicrobial Chemotherapy
2021 | Journal article
EID:

2-s2.0-85102152978

Part of ISSN: 14602091 03057453
Contributors: Kuo, S.-C.; Tan, M.-C.; Huang, W.-C.; Wu, H.-C.; Chen, F.-J.; Liao, Y.-C.; Wang, H.-Y.; Shiau, Y.-R.; Lauderdale, T.-L.
Source: Self-asserted source
Yu-Chieh Liao via Scopus - Elsevier

Dusp6 Depletion Enhances Gut Barrier Integrity and Microbiota Eubiosis Against Dextran Sulfate Sodium-Induced Colitis in Mice

ResearchSquare
2020 | Other
EID:

2-s2.0-85133851345

Contributors: Chang, C.-S.; Liao, Y.-C.; Huang, C.-T.; Lin, C.-M.; Cheung, C.H.Y.; Ruan, J.-W.; Yu, W.-H.; Tsai, Y.-T.; Juan, H.-F.; Huang, H.-C. et al.
Source: Self-asserted source
Yu-Chieh Liao via Scopus - Elsevier

Plasmid- and chromosome-located mcr-3 in mcr-1-positive Escherichia coli in Taiwan

International Journal of Antimicrobial Agents
2020 | Journal article
EID:

2-s2.0-85085350977

Part of ISSN: 18727913 09248579
Contributors: Hsu, C.-Y.; Chen, F.-J.; Huang, W.-C.; Liao, Y.-C.; Lauderdale, T.-L.; Kuo, S.-C.
Source: Self-asserted source
Yu-Chieh Liao via Scopus - Elsevier

Completing Circular Bacterial Genomes With Assembly Complexity by Using a Sampling Strategy From a Single MinION Run With Barcoding

Frontiers in Microbiology
2019 | Journal article
EID:

2-s2.0-85072826035

Part of ISSN: 1664302X
Contributors: Liao, Y.-C.; Cheng, H.-W.; Wu, H.-C.; Kuo, S.-C.; Lauderdale, T.-L.Y.; Chen, F.-J.
Source: Self-asserted source
Yu-Chieh Liao via Scopus - Elsevier

Genomic analysis of serologically untypable human enteroviruses in Taiwan

Journal of Biomedical Science
2019 | Journal article
EID:

2-s2.0-85068578620

Part of ISSN: 14230127 10217770
Contributors: Chien, Y.-S.; Luo, S.-T.; Tsao, K.-C.; Huang, Y.-C.; Chung, W.-Y.; Liao, Y.-C.; Tan, Y.; Das, S.R.; Lee, M.-S.
Source: Self-asserted source
Yu-Chieh Liao via Scopus - Elsevier

Simultaneous detections of genetic fragment and single nucleotide mutation with a three-tiered output for tuberculosis diagnosis

Analytica Chimica Acta
2018 | Journal article
EID:

2-s2.0-85040021151

Part of ISSN: 18734324 00032670
Contributors: Huang, S.-Y.; Chang, J.-R.; Liao, Y.-C.; Dou, H.-Y.; Chuang, M.-C.
Source: Self-asserted source
Yu-Chieh Liao via Scopus - Elsevier

Veillonella infantium sp. Nov., an anaerobic, gram-stain-negative coccus isolated from tongue biofilm of a thai child

International Journal of Systematic and Evolutionary Microbiology
2018 | Journal article
EID:

2-s2.0-85044963442

Part of ISSN: 14665026
Contributors: Mashima, I.; Liao, Y.-C.; Miyakawa, H.; Theodorea, C.F.; Thawboon, B.; Thaweboon, S.; Scannapieco, F.A.; Nakazawa, F.
Source: Self-asserted source
Yu-Chieh Liao via Scopus - Elsevier

A mutation-resistant deoxyribozyme or gate for highly selective detection of viral nucleic acids

Chemical Communications
2017 | Journal article
EID:

2-s2.0-85029855915

Part of ISSN: 1364548X 13597345
Contributors: Kamar, O.; Sun, S.-C.; Lin, C.-H.; Chung, W.-Y.; Lee, M.-S.; Liao, Y.-C.; Kolpashchikov, D.M.; Chuang, M.-C.
Source: Self-asserted source
Yu-Chieh Liao via Scopus - Elsevier

Comparative genomics and evolution of the amylase-binding proteins of oral streptococci

BMC Microbiology
2017 | Journal article
EID:

2-s2.0-85018475408

Part of ISSN: 14712180
Contributors: Haase, E.M.; Kou, Y.; Sabharwal, A.; Liao, Y.-C.; Lan, T.; Lindqvist, C.; Scannapieco, F.A.
Source: Self-asserted source
Yu-Chieh Liao via Scopus - Elsevier

Critical Assessment of Metagenome Interpretation - A benchmark of metagenomics software

Nature Methods
2017 | Journal article
EID:

2-s2.0-85030454987

Part of ISSN: 15487105 15487091
Contributors: Sczyrba, A.; Hofmann, P.; Belmann, P.; Koslicki, D.; Janssen, S.; Dröge, J.; Gregor, I.; Majda, S.; Fiedler, J.; Dahms, E. et al.
Source: Self-asserted source
Yu-Chieh Liao via Scopus - Elsevier

Critical Assessment of Metagenome Interpretation – a benchmark of computational metagenomics software

bioRxiv
2017 | Other
EID:

2-s2.0-85095056375

Part of ISSN: 26928205
Contributors: Sczyrba, A.; Hofmann, P.; Belmann, P.; Koslicki, D.; Janssen, S.; Dröge, J.; Gregor, I.; Majda, S.; Fiedler, J.; Dahms, E. et al.
Source: Self-asserted source
Yu-Chieh Liao via Scopus - Elsevier

drVM: A new tool for efficient genome assembly of known eukaryotic viruses from metagenomes

GigaScience
2017 | Journal article
EID:

2-s2.0-85021860119

Part of ISSN: 2047217X
Contributors: Lin, H.-H.; Liao, Y.-C.
Source: Self-asserted source
Yu-Chieh Liao via Scopus - Elsevier

Erratum to: comparative genomics and evolution of the amylase-binding proteins of oral streptococci

BMC microbiology
2017 | Journal article
EID:

2-s2.0-85058851245

Part of ISSN: 14712180
Contributors: Haase, E.M.; Kou, Y.; Sabharwal, A.; Liao, Y.-C.; Lan, T.; Lindqvist, C.; Scannapieco, F.A.
Source: Self-asserted source
Yu-Chieh Liao via Scopus - Elsevier

Accurate binning of metagenomic contigs via automated clustering sequences using information of genomic signatures and marker genes

Scientific Reports
2016 | Journal article
EID:

2-s2.0-84963800052

Part of ISSN: 20452322
Contributors: Lin, H.-H.; Liao, Y.-C.
Source: Self-asserted source
Yu-Chieh Liao via Scopus - Elsevier

Dual-specificity phosphatase 6 deficiency regulates gut microbiome and transcriptome response against diet-induced obesity in mice

Nature Microbiology
2016 | Journal article
EID:

2-s2.0-84999723752

Part of ISSN: 20585276
Contributors: Ruan, J.-W.; Statt, S.; Huang, C.-T.; Tsai, Y.-T.; Kuo, C.-C.; Chan, H.-L.; Liao, Y.-C.; Tan, T.-H.; Kao, C.-Y.
Source: Self-asserted source
Yu-Chieh Liao via Scopus - Elsevier

Completing bacterial genome assemblies: Strategy and performance comparisons

Scientific Reports
2015 | Journal article
Source: Self-asserted source
Yu-Chieh Liao

Draft genome sequences of 18 oral streptococcus strains that encode amylase-binding proteins

Genome Announcements
2015 | Journal article
EID:

2-s2.0-85008497386

Part of ISSN: 21698287
Contributors: Sabharwal, A.; Liao, Y.-C.; Lin, H.-H.; Haase, E.M.; Scannapieco, F.A.
Source: Self-asserted source
Yu-Chieh Liao via Scopus - Elsevier

Errautm: Recognition of Dual Targets by a Molecular Beacon-Based Sensor: Subtyping of Influenza A Virus (Analytical Chemistry (2015) 87:10 (5410-5416) DOI: 10.1021/acs.analchem.5b00810)

Analytical Chemistry
2015 | Journal article
Source: Self-asserted source
Yu-Chieh Liao

Evaluation and validation of assembling corrected pacbio long reads for microbial genome completion via hybrid approaches

PLoS ONE
2015 | Journal article
EID:

2-s2.0-84955502827

Part of ISSN: 19326203
Contributors: Lin, H.-H.; Liao, Y.-C.
Source: Self-asserted source
Yu-Chieh Liao via Scopus - Elsevier

MyPro: A seamless pipeline for automated prokaryotic genome assembly and annotation

Journal of Microbiological Methods
2015 | Journal article
Source: Self-asserted source
Yu-Chieh Liao

Recognition of dual targets by a molecular beacon-based sensor: Subtyping of influenza a virus

Analytical Chemistry
2015 | Journal article
Source: Self-asserted source
Yu-Chieh Liao

MyPro: A seamless pipeline for automated prokaryotic genome assembly and annotation

Journal of Microbiological Methods
2015-06 | Journal article
Source: Self-asserted source
Yu-Chieh Liao
grade
Preferred source (of 44)‎

Biomolecular logic gate for analysis of the New Delhi metallo-β-lactamase (NDM)-coding gene with concurrent determination of its drug resistance-encoding fragments

Chemical Communications
2014 | Journal article
Source: Self-asserted source
Yu-Chieh Liao

Draft genome sequence of the Mycobacterium tuberculosis clinical isolate C2, belonging to the Latin American-Mediterranean family

Genome Announcements
2014 | Journal article
EID:

2-s2.0-84999293318

Part of ISSN: 21698287
Contributors: Liao, Y.-C.; Chen, Y.-Y.; Lin, H.-H.; Chang, J.-R.; Su, I.-J.; Huang, T.-S.; Dou, H.-Y.
Source: Self-asserted source
Yu-Chieh Liao via Scopus - Elsevier

Draft genome sequences of the Mycobacterium tuberculosis clinical strains A2 and A4, isolated from a relapse patient in Taiwan

Genome Announcements
2014 | Journal article
EID:

2-s2.0-85003819938

Part of ISSN: 21698287
Contributors: Liao, Y.-C.; Chen, Y.-Y.; Lin, H.-H.; Chang, J.-R.; Su, I.-J.; Huang, T.-S.; Dou, H.-Y.
Source: Self-asserted source
Yu-Chieh Liao via Scopus - Elsevier

Pros and cons of the tuberculosis drugome approach - An empirical analysis

PLoS ONE
2014 | Journal article
Source: Self-asserted source
Yu-Chieh Liao

CISA: Contig Integrator for Sequence Assembly of Bacterial Genomes

PLoS ONE
2013 | Journal article
Source: Self-asserted source
Yu-Chieh Liao

Draft genome sequence of NDM-1-producing Klebsiella pneumoniae clinical isolate 303K

Genome Announcements
2013 | Journal article
EID:

2-s2.0-84999766482

Part of ISSN: 21698287
Contributors: Liao, Y.-C.; Chen, Y.-H.; Lin, H.-H.; Mu, J.-J.; Wu, H.-S.; Chen, F.-C.; Hsiung, C.A.
Source: Self-asserted source
Yu-Chieh Liao via Scopus - Elsevier

Identification of cytotoxic T lymphocyte epitopes on swine viruses: Multi-epitope design for universal T cell vaccine

PLoS ONE
2013 | Journal article
Source: Self-asserted source
Yu-Chieh Liao

Monitoring the antigenic evolution of human influenza A viruses to understand how and when viruses escape from existing immunity

BMC Research Notes
2013 | Journal article
Source: Self-asserted source
Yu-Chieh Liao

GEMSiRV: A software platform for GEnome-scale metabolic model simulation, reconstruction and visualization

Bioinformatics
2012 | Journal article
Source: Self-asserted source
Yu-Chieh Liao

A community effort towards a knowledge-base and mathematical model of the human pathogen Salmonella Typhimurium LT2

BMC Systems Biology
2011 | Journal article
Source: Self-asserted source
Yu-Chieh Liao

An experimentally validated genome-scale metabolic reconstruction of Klebsiella pneumoniae MGH 78578, iYL1228

Journal of Bacteriology
2011 | Journal article
Source: Self-asserted source
Yu-Chieh Liao

MrBac: A web server for draft metabolic network reconstructions for bacteria

Bioengineered Bugs
2011 | Journal article
Source: Self-asserted source
Yu-Chieh Liao

Contrasting substitution patterns between HA proteins of avian and human influenza viruses: Implication for monitoring human influenza epidemics

Vaccine
2010 | Journal article
Source: Self-asserted source
Yu-Chieh Liao

ATIVS: Analytical tool for influenza virus surveillance

Nucleic Acids Research
2009 | Journal article
Source: Self-asserted source
Yu-Chieh Liao

Effects of poly(ethylene glycol) and salt on the binding of α-amylase from the fermentation broth of Bacillus amyloliquefaciens by Cu2+-β-CD affinity adsorbent

Carbohydrate Polymers
2009 | Journal article
Source: Self-asserted source
Yu-Chieh Liao

Bioinformatics models for predicting antigenic variants of influenza A/ H3N2 virus

Bioinformatics
2008 | Journal article
Source: Self-asserted source
Yu-Chieh Liao

Chronic treatment with aripiprazole induces differential gene expression in the rat frontal cortex

International Journal of Neuropsychopharmacology
2008 | Journal article
Source: Self-asserted source
Yu-Chieh Liao

Chronic treatment with aripiprazole induces differential gene expression in the rat frontal cortex

International Journal of Neuropsychopharmacology
2008 | Journal article
Source: Self-asserted source
Yu-Chieh Liao

Identifying potential immunodominant positions and predicting antigenic variants of influenza A/H3N2 viruses

Vaccine
2007 | Journal article
Source: Self-asserted source
Yu-Chieh Liao

A simple and quantitative method for analysis of methoxyamine by capillary zone electrophoresis

Journal of Liquid Chromatography and Related Technologies
2005 | Journal article
Source: Self-asserted source
Yu-Chieh Liao

Development and validation of an HPLC-UV method for the analysis of methoxyamine using 4-(diethylamino)benzaldehyde as a derivatizing agent

Journal of Pharmaceutical and Biomedical Analysis
2005 | Journal article
Source: Self-asserted source
Yu-Chieh Liao

Novel immobilized metal ion affinity adsorbent based on cross-linked β-cyclodextrin matrix for repeated adsorption of α-amylase

Biochemical Engineering Journal
2005 | Journal article
Source: Self-asserted source
Yu-Chieh Liao

Peer review (8 reviews for 7 publications/grants)

Review activity for Bioinformatics (1)
Review activity for BMC bioinformatics (1)
Review activity for Foods. (1)
Review activity for iMeta. (1)
Review activity for International journal of molecular sciences. (2)
Review activity for Microorganisms. (1)
Review activity for Viruses. (1)