Personal information

No personal information available

Activities

Education and qualifications (1)

Massachusetts Institute of Technology: Cambridge, MA, US

2007-09-01 to 2015-09-01 | Ph.D (Physics)
Education
Source: Self-asserted source
Maxim Imakaev

Works (25)

Is tumor mutational burden predictive of response to immunotherapy?

2024-10-14 | Preprint
Contributors: Carino Gurjao; Dina Tsukrov; Maxim Imakaev; Lovelace J Luquette; Leonid A Mirny
Source: check_circle
Crossref

Is tumor mutational burden predictive of response to immunotherapy?

2024-10-14 | Preprint
Contributors: Carino Gurjao; Dina Tsukrov; Maxim Imakaev; Lovelace J Luquette; Leonid A Mirny
Source: check_circle
Crossref

Crumpled Polymer with Loops Recapitulates Key Features of Chromosome Organization

Physical Review X
2023-11-13 | Journal article
Contributors: Kirill E. Polovnikov; Hugo B. Brandão; Sergey Belan; Bogdan Slavov; Maxim Imakaev; Leonid A. Mirny
Source: check_circle
Crossref

Is tumor mutational burden predictive of response to immunotherapy?

2023-06-20 | Preprint
Contributors: Carino Gurjao; Dina Tsukrov; Maxim Imakaev; Lovelace J. Luquette; Leonid A. Mirny
Source: check_circle
Crossref

Pairtools: from sequencing data to chromosome contacts

2023-02-15 | Preprint
Contributors: Nezar Abdennur; Geoffrey Fudenberg; Ilya M. Flyamer; Aleksandra A. Galitsyna; Anton Goloborodko; Maxim Imakaev; Sergey V. Venev
Source: check_circle
Crossref

Diverse silent chromatin states modulate genome compartmentalization and loop extrusion barriers

Nature Structural & Molecular Biology
2023-01 | Journal article
Contributors: George Spracklin; Nezar Abdennur; Maxim Imakaev; Neil Chowdhury; Sriharsa Pradhan; Leonid A. Mirny; Job Dekker
Source: check_circle
Crossref

Cooltools: enabling high-resolution Hi-C analysis in Python

2022-11-01 | Preprint
Contributors: Nezar Abdennur; Sameer Abraham; Geoffrey Fudenberg; Ilya M. Flyamer; Aleksandra A. Galitsyna; Anton Goloborodko; Maxim Imakaev; Betul A. Oksuz; Sergey V. Venev
Source: check_circle
Crossref

Bioframe: Operations on Genomic Intervals in Pandas Dataframes

2022-02-19 | Preprint
Contributors: Nezar Abdennur; Geoffrey Fudenberg; Ilya Flyamer; Aleksandra A. Galitsyna; Anton Goloborodko; Maxim Imakaev; Sergey V. Venev
Source: check_circle
Crossref

Crumpled polymer with loops recapitulates key features of chromosome organization

2022-02-04 | Preprint
Contributors: Kirill E. Polovnikov; Bogdan Slavov; Sergey Belan; Maxim Imakaev; Hugo B. Brandão; Leonid A. Mirny
Source: check_circle
Crossref

Making waves: Defining the lead time of wastewater-based epidemiology for COVID-19

Water Research
2021-09 | Journal article
Contributors: Scott W. Olesen; Maxim Imakaev; Claire Duvallet
Source: check_circle
Crossref

Nationwide trends in COVID-19 cases and SARS-CoV-2 wastewater concentrations in the United States

2021-09-12 | Other
Contributors: Claire Duvallet; Fuqing Wu; Kyle A. McElroy; Maxim Imakaev; Noriko Endo; Amy Xiao; Jianbo Zhang; Róisín Floyd-O’Sullivan; Morgan M Powell; Samuel Mendola et al.
Source: check_circle
Crossref

Heterochromatin diversity modulates genome compartmentalization and loop extrusion barriers

2021-08-06 | Other
Contributors: George Spracklin; Nezar Abdennur; Maxim Imakaev; Neil Chowdhury; Sriharsa Pradhan; Leonid Mirny; Job Dekker
Source: check_circle
Crossref

Quantitative detection of SARS-CoV-2 B.1.1.7 variant in wastewater by allele-specific RT-qPCR

2021-03-29 | Other
Contributors: Wei Lin Lee; Kyle A McElroy; Federica Armas; Maxim Imakaev; Xiaoqiong Gu; Claire Duvallet; Franciscus Chandra; Hongjie Chen; Mats Leifels; Samuel Mendola et al.
Source: check_circle
Crossref

Is tumor mutational burden predictive of response to immunotherapy?

2020-09-04 | Preprint
Contributors: Carino Gurjao; Dina Tsukrov; Maxim Imakaev; Lovelace J. Luquette; Leonid A. Mirny
Source: check_circle
Crossref

The genome-wide multi-layered architecture of chromosome pairing in early Drosophila embryos

Nature Communications
2019-10-03 | Journal article
Contributors: Jelena Erceg; Jumana AlHaj Abed; Anton Goloborodko; Bryan R. Lajoie; Geoffrey Fudenberg; Nezar Abdennur; Maxim Imakaev; Ruth B. McCole; Son C. Nguyen; Wren Saylor et al.
Source: check_circle
Crossref

Publisher Correction: Immune genes are primed for robust transcription by proximal long noncoding RNAs located in nuclear compartments

Nature Genetics
2019-02-15 | Journal article
Contributors: Stephanie Fanucchi; Ezio T. Fok; Emiliano Dalla; Youtaro Shibayama; Kathleen Börner; Erin Y. Chang; Stoyan Stoychev; Maxim Imakaev; Dirk Grimm; Kevin C. Wang et al.
Source: check_circle
Crossref

Immune genes are primed for robust transcription by proximal long noncoding RNAs located in nuclear compartments

Nature Genetics
2019-01 | Journal article
Contributors: Stephanie Fanucchi; Ezio T. Fok; Emiliano Dalla; Youtaro Shibayama; Kathleen Börner; Erin Y. Chang; Stoyan Stoychev; Maxim Imakaev; Dirk Grimm; Kevin C. Wang et al.
Source: check_circle
Crossref

Emerging Evidence of Chromosome Folding by Loop Extrusion

2018-02-16 | Other
Contributors: Geoffrey Fudenberg; Nezar Abdennur; Maxim Imakaev; Anton Goloborodko; Leonid A. Mirny
Source: check_circle
Crossref

Heterochromatin drives organization of conventional and inverted nuclei

2018-01-09 | Other
Contributors: Martin Falk; Yana Feodorova; Natasha Naumova; Maxim Imakaev; Bryan R. Lajoie; Heinrich Leonhardt; Boris Joffe; Job Dekker; Geoffrey Fudenberg; Irina Solovei et al.
Source: check_circle
Crossref

Effects of topological constraints on globular polymers

Soft Matter
2014 | Journal article
DOI:

10.1039/c4sm02099e

Contributors: Maxim V. Imakaev; Konstantin M. Tchourine; Sergei K. Nechaev; Leonid A. Mirny
Source: Self-asserted source
Maxim Imakaev via Crossref Metadata Search

Chromatin Loops as Allosteric Modulators of Enhancer-Promoter Interactions

PLoS Comput Biol
2014-10 | Journal article
DOI:

10.1371/journal.pcbi.1003867

Contributors: Boryana Doyle; Geoffrey Fudenberg; Maxim Imakaev; Leonid A. Mirny; Marc A. Marti-Renom
Source: Self-asserted source
Maxim Imakaev via Crossref Metadata Search

Organization of the Mitotic Chromosome

Science
2013-11-07 | Journal article
DOI:

10.1126/science.1236083

Contributors: N. Naumova; M. Imakaev; G. Fudenberg; Y. Zhan; B. R. Lajoie; L. A. Mirny; J. Dekker
Source: Self-asserted source
Maxim Imakaev via Crossref Metadata Search

High-Resolution Mapping of the Spatial Organization of a Bacterial Chromosome

Science
2013-10 | Journal article
DOI:

10.1126/science.1242059

Contributors: T. B. K. Le; M. V. Imakaev; L. A. Mirny; M. T. Laub
Source: Self-asserted source
Maxim Imakaev via Crossref Metadata Search

Iterative correction of Hi-C data reveals hallmarks of chromosome organization

Nat Meth
2012-09-02 | Journal article
DOI:

10.1038/nmeth.2148

Contributors: Maxim Imakaev; Geoffrey Fudenberg; Rachel Patton McCord; Natalia Naumova; Anton Goloborodko; Bryan R Lajoie; Job Dekker; Leonid A Mirny
Source: Self-asserted source
Maxim Imakaev via Crossref Metadata Search

Hi-C: A Method to Study the Three-dimensional Architecture of Genomes.

JoVE
2010 | Journal article
DOI:

10.3791/1869

Contributors: Nynke L. van Berkum; Erez Lieberman-Aiden; Louise Williams; Maxim Imakaev; Andreas Gnirke; Leonid A. Mirny; Job Dekker; Eric S. Lander
Source: Self-asserted source
Maxim Imakaev via Crossref Metadata Search

Peer review (3 reviews for 2 publications/grants)

Review activity for Genome biology. (2)
Review activity for Nature communications (1)