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Works (20)

Image-based models of T-cell distribution identify a clinically meaningful response to a dendritic cell vaccine in patients with glioblastoma

2023-07-16 | Preprint
DOI: 10.1101/2023.07.13.23292619
Contributors: Kamila M. Bond; Lee Curtin; Andrea Hawkins-Daarud; Javier C. Urcuyo; Gustavo De Leon; Kyle W. Singleton; Ariana E. Afshari; Lisa E. Paulson; Christopher P. Sereduk; Kris A. Smith et al.
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Towards Longitudinal Glioma Segmentation: Evaluating combined pre- and post-treatment MRI training data for automated tumor segmentation using nnU-Net

2023-06-05 | Preprint
DOI: 10.1101/2023.05.31.23290537
Contributors: Sara Ranjbar; Kyle W. Singleton; Lee Curtin; Lisa Paulson; Kamala Clark-Swanson; Andrea Hawkins-Daarud; J. Ross Mitchell; Pamela R. Jackson; Kristin R. Swanson
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Image-localized biopsy mapping of brain tumor heterogeneity: A single-center study protocol

2022-11-17 | Preprint
DOI: 10.1101/2022.11.14.22282304
Contributors: Javier C. Urcuyo; Lee Curtin; Jazlynn M. Langworthy; Gustavo De Leon; Barrett Anderies; Kyle W. Singleton; Andrea Hawkins-Daarud; Pamela R. Jackson; Kamila M. Bond; Sara Ranjbar et al.
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Knowledge-Infused Global-Local Data Fusion for Spatial Predictive Modeling in Precision Medicine

IEEE Transactions on Automation Science and Engineering
2022-07 | Journal article
DOI: 10.1109/TASE.2021.3076117
Contributors: Lujia Wang; Andrea Hawkins-Daarud; Kristin R. Swanson; Leland S. Hu; Jing Li
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Simulated Diffusion Weighted Images Based on Model-Predicted Tumor Growth

2020 | Book chapter
DOI: 10.1007/978-3-030-59520-3_4
Contributors: Pamela R. Jackson; Andrea Hawkins-Daarud; Kristin R. Swanson
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A Mechanistic Investigation into Ischemia-Driven Distal Recurrence of Glioblastoma

Bulletin of Mathematical Biology
2020-11 | Journal article
DOI: 10.1007/s11538-020-00814-y
Contributors: Lee Curtin; Andrea Hawkins-Daarud; Alyx B. Porter; Kristoffer G. van der Zee; Markus R. Owen; Kristin R. Swanson
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Sex Differences in MRI-Based Metrics of Glioma Invasion and Brain Mechanics

2020-11-22 | Preprint
DOI: 10.1101/2020.11.21.352724
Contributors: Barrett J. Anderies; Sara F. Yee; Pamela R. Jackson; Cassandra R. Rickertsen; Andrea J. Hawkins-Daarud; Sandra K. Johnston; Kamala R. Clark-Swanson; Joseph M. Hoxworth; Yuan Le; Yuxiang Zhou et al.
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A Mechanistic Investigation into Ischemia-Driven Distal Recurrence of Glioblastoma

2020-04-04 | Preprint
DOI: 10.1101/2020.04.03.022202
Contributors: Lee Curtin; Andrea Hawkins-Daarud; Alyx B. Porter; Kristoffer G. van der Zee; Markus R. Owen; Kristin R. Swanson
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Speed Switch in Glioblastoma Growth Rate due to Enhanced Hypoxia-Induced Migration

Bulletin of Mathematical Biology
2020-03 | Journal article
DOI: 10.1007/s11538-020-00718-x
Contributors: Lee Curtin; Andrea Hawkins-Daarud; Kristoffer G. van der Zee; Kristin R. Swanson; Markus R. Owen
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From cells to tissue: How cell scale heterogeneity impacts glioblastoma growth and treatment response

PLOS Computational Biology
2020-02-26 | Journal article
DOI: 10.1371/journal.pcbi.1007672
Contributors: Jill A. Gallaher; Stacey Finley; Susan C. Massey; Andrea Hawkins-Daarud; Sonal S. Noticewala; Russell C. Rockne; Sandra K. Johnston; Luis Gonzalez-Cuyar; Joseph Juliano; Orlando Gil et al.
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Sex Differences in Predicting Fluid Intelligence of Adolescent Brain from T1-Weighted MRIs

2019 | Book chapter
DOI: 10.1007/978-3-030-31901-4_18
Contributors: Sara Ranjbar; Kyle W. Singleton; Lee Curtin; Susan Christine Massey; Andrea Hawkins-Daarud; Pamela R. Jackson; Kristin R. Swanson
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Investigating the Role of Hypoxia-Induced Migration in Glioblastoma Growth Rates

2019-12-05 | Other
DOI: 10.1101/862920
Contributors: Lee Curtin; Andrea Hawkins-Daarud; Kristoffer G. van der Zee; Kristin R. Swanson; Markus R. Owen
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Integration of machine learning and mechanistic models accurately predicts variation in cell density of glioblastoma using multiparametric MRI

Scientific Reports
2019-07-11 | Journal article
DOI: 10.1038/s41598-019-46296-4
Contributors: Nathan Gaw; Andrea Hawkins-Daarud; Leland S. Hu; Hyunsoo Yoon; Lujia Wang; Yanzhe Xu; Pamela R. Jackson; Kyle W. Singleton; Leslie C. Baxter; Jennifer Eschbacher et al.
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Modeling the Role of Hypoxia in Glioblastoma Growth and Recurrence Patterns

2019-07-05 | Other
DOI: 10.1101/691238
Contributors: Lee Curtin; Andrea Hawkins-Daarud; Alyx B. Porter; Markus R. Owen; Kristoffer G. van der Zee; Kristin R. Swanson
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Crossref

The 2019 mathematical oncology roadmap

Physical Biology
2019-07-01 | Journal article
DOI: 10.1088/1478-3975/ab1a09
Contributors: Russell C Rockne; Andrea Hawkins-Daarud; Kristin R Swanson; James P Sluka; James A Glazier; Paul Macklin; David A Hormuth, II; Angela M Jarrett; Ernesto A B F Lima; J Tinsley Oden et al.
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From cells to tissue: How cell scale heterogeneity impacts glioblastoma growth and treatment response

2019-05-26 | Other
DOI: 10.1101/650150
Contributors: Jill A. Gallaher; Susan C. Massey; Andrea Hawkins-Daarud; Sonal S. Noticewala; Russell C. Rockne; Sandra K. Johnston; Luis Gonzalez-Cuyar; Joseph Juliano; Orlando Gil; Kristin R. Swanson et al.
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Crossref

Quantifying Uncertainty and Robustness in a Biomathematical Model Based Patient-Specific Response Metric for Glioblastoma

2018-05-17 | Other
DOI: 10.1101/325340
Contributors: Andrea Hawkins-Daarud; Sandra K. Johnston; Kristin R. Swanson
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Hybrid approach for parameter estimation in agent-based models

2017-08-13 | Preprint
DOI: 10.1101/175661
Contributors: Jill A. Gallaher; Andrea Hawkins-Daarud; Susan C. Massey; Kristin R. Swanson; Alexander R.A. Anderson
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MultiCellDS: a standard and a community for sharing multicellular data

2016-12-09 | Preprint
DOI: 10.1101/090696
Contributors: Samuel H. Friedman; Alexander R. A. Anderson; David M. Bortz; Alexander G. Fletcher; Hermann B. Frieboes; Ahmadreza Ghaffarizadeh; David Robert Grimes; Andrea Hawkins-Daarud; Stefan Hoehme; Edwin F. Juarez et al.
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MultiCellDS: a community-developed standard for curating microenvironment-dependent multicellular data

2016-11-30 | Preprint
DOI: 10.1101/090456
Contributors: Samuel H. Friedman; Alexander R. A. Anderson; David M. Bortz; Alexander G. Fletcher; Hermann B. Frieboes; Ahmadreza Ghaffarizadeh; David Robert Grimes; Andrea Hawkins-Daarud; Stefan Hoehme; Edwin F. Juarez et al.
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Peer review (3 reviews for 3 publications/grants)

Review activity for Journal of mathematical biology. (1)
Review activity for npj systems biology and applications. (1)
Review activity for PLoS computational biology. (1)
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