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Scopus Author ID: 55497164000

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Employment (3)

Osaka University: Osaka, JP

2021-06 to present | Associate Professor (Graduate School of Engineering Science)
Employment
Source: Self-asserted source
Daiki Matsunaga

Osaka University: Osaka, JP

2018-08-01 to 2021-06 | Assistant Professor (Graduate School of Engineering Science)
Employment
Source: Self-asserted source
Daiki Matsunaga

University of Oxford: Oxford, Oxfordshire, GB

2016-04-01 to 2018-07-31 | Postdoctoral Research Assistant (Rudolf Peierls Centre for Theoretical Physics)
Employment
Source: Self-asserted source
Daiki Matsunaga

Education and qualifications (3)

Tohoku University: Sendai, JP

2013-04-01 to 2016-03-31 | PhD (Engineering) ( Department of Bioengineering and Robotics)
Education
Source: Self-asserted source
Daiki Matsunaga

Tohoku University: Sendai, JP

2011-04-01 to 2013-03-31 | Master degree ( Department of Bioengineering and Robotics)
Education
Source: Self-asserted source
Daiki Matsunaga

Tohoku University: Sendai, JP

2007-04-01 to 2011-03-31 | Batchelor's degree (Department of Mechanical and Aerospace Engineering)
Education
Source: Self-asserted source
Daiki Matsunaga

Works (35)

Mapping molecular diffusion across the whole cell with spatial statistics-based FRAP

2025-02-08 | Preprint
DOI: 10.1101/2025.02.08.637213
Contributors: Yohei Okabe; Takumi Saito; Outa Nakashima; Daiki Matsunaga; Shinji Deguchi
Source: check_circle
Crossref

Diffusion model predicts the geometry of actin cytoskeleton from cell morphology

PLOS Computational Biology
2024-08-05 | Journal article
DOI: 10.1371/journal.pcbi.1012312
Contributors: Honghan Li; Stefan Klumpp; Shiyou Liu; Shinji Deguchi; Daiki Matsunaga
Source: check_circle
Crossref

Asymmetric bistability of chiral particle orientation in viscous shear flows

Proceedings of the National Academy of Sciences
2023-11-07 | Journal article
DOI: 10.1073/pnas.2310939120
Contributors: Andreas Zöttl; Francesca Tesser; Daiki Matsunaga; Justine Laurent; Olivia du Roure; Anke Lindner
Source: check_circle
Crossref

Knowledge “installed” diffusion model predicts the geometry of actin cytoskeleton from cell morphology

2023-01-16 | Preprint
DOI: 10.1101/2023.01.12.523863
Contributors: Honghan Li; Shiyou Liu; Shinji Deguchi; Daiki Matsunaga
Source: check_circle
Crossref

A model explaining environmental stiffness-dependent migration of fibroblasts with a focus on maturation of intracellular structures

2022-12-31 | Preprint
DOI: 10.1101/2022.12.30.522353
Contributors: Natsuki Saito; Tsubasa S Matsui; Daiki Matsunaga; Kana Furukawa; Shinji Deguchi
Source: check_circle
Crossref

Field-controlling patterns of sheared ferrofluid droplets

Physics of Fluids
2022-06 | Journal article
DOI: 10.1063/5.0094415
Contributors: Shunichi Ishida; Yaochen Yang; Fanlong Meng; Daiki Matsunaga
Source: check_circle
Crossref

Particle segregation using crystal-like structure of capsules in wall-bounded shear flow

Physical Review Fluids
2022-06-10 | Journal article
DOI: 10.1103/physrevfluids.7.063601
Part of ISSN: 2469-990X
Source: Self-asserted source
Daiki Matsunaga
grade
Preferred source (of 2)‎

Analysis of chemical and mechanical behaviors in living cells by continuum mechanics-based FRAP

2022-04-16 | Preprint
DOI: 10.1101/2022.04.16.488540
Contributors: Takumi Saito; Daiki Matsunaga; Shinji Deguchi
Source: check_circle
Crossref

Wrinkle force microscopy: a machine learning based approach to predict cell mechanics from images

Communications Biology
2022-04-14 | Journal article
DOI: 10.1038/s42003-022-03288-x
Contributors: Honghan Li; Daiki Matsunaga; Tsubasa S. Matsui; Hiroki Aosaki; Genki Kinoshita; Koki Inoue; Amin Doostmohammadi; Shinji Deguchi
Source: check_circle
Crossref

A model for determining the length distribution of actin filaments in cells

2022-03-18 | Preprint
DOI: 10.1101/2022.03.17.484821
Contributors: Yuika Ueda; Daiki Matsunaga; Shinji Deguchi
Source: check_circle
Crossref

Determining the domain-level reaction-diffusion properties of an actin-binding protein transgelin-2 within cells

Experimental Cell Research
2021-07 | Journal article
DOI: 10.1016/j.yexcr.2021.112619
Contributors: Takumi Saito; Daiki Matsunaga; Tsubasa S. Matsui; Kentaro Noi; Shinji Deguchi
Source: check_circle
Crossref

Magnetic Microswimmers Exhibit Bose-Einstein-like Condensation

Physical Review Letters
2021-02-16 | Journal article
DOI: 10.1103/PhysRevLett.126.078001
Contributors: Fanlong Meng; Daiki Matsunaga; Benoît Mahault; Ramin Golestanian
Source: check_circle
Crossref

Wrinkle force microscopy: a new machine learning based approach to predict cell mechanics from images

2021-02-01 | Preprint
DOI: 10.1101/2021.02.01.429065
Contributors: Honghan Li; Daiki Matsunaga; Tsubasa S. Matsui; Hiroki Aosaki; Koki Inoue; Amin Doostmohammadi; Shinji Deguchi
Source: check_circle
Crossref

Complex viscosity of dilute capsule suspensions: a numerical study

Journal of Biomechanical Science and Engineering
2020 | Journal article
DOI: 10.1299/jbse.20-00102
Part of ISSN: 1880-9863
Source: Self-asserted source
Daiki Matsunaga

Degenerate states, emergent dynamics and fluid mixing by magnetic rotors

Soft Matter
2020 | Journal article
DOI: 10.1039/D0SM00454E
Contributors: Takuma Kawai; Daiki Matsunaga; Fanlong Meng; Julia M. Yeomans; Ramin Golestanian
Source: check_circle
Crossref

Rheology of a dilute ferrofluid droplet suspension in shear flow: Viscosity and normal stress differences

Physical Review Fluids
2020-12-15 | Journal article
DOI: 10.1103/PhysRevFluids.5.123603
Contributors: Shunichi Ishida; Daiki Matsunaga
Source: check_circle
Crossref

Image based cellular contractile force evaluation with small-world network inspired CNN: SW-UNet

Biochemical and Biophysical Research Communications
2020-09 | Journal article
DOI: 10.1016/j.bbrc.2020.04.134
Contributors: Honghan Li; Daiki Matsunaga; Tsubasa S. Matsui; Hiroki Aosaki; Shinji Deguchi
Source: check_circle
Crossref

Diffusion and collective motion of rotlets in 2D space*

Chinese Physics B
2020-06-01 | Journal article
DOI: 10.1088/1674-1056/ab8ac3
Part of ISSN: 1674-1056
Source: Self-asserted source
Daiki Matsunaga

Multi-well plate cell contraction assay detects negatively correlated cellular responses to pharmacological inhibitors in contractility and migration

Biochemical and Biophysical Research Communications
2020-01 | Journal article
DOI: 10.1016/j.bbrc.2019.10.160
Part of ISSN: 0006-291X
Source: Self-asserted source
Daiki Matsunaga

Magnetically-actuated artificial cilium: a simple theoretical model

Soft Matter
2019 | Journal article
DOI: 10.1039/c8sm02561d
Part of ISSN: 1744-683X
Part of ISSN: 1744-6848
Source: Self-asserted source
Daiki Matsunaga

Shear viscosity of bimodal capsule suspensions in simple shear flow

Physical Review Fluids
2019-11-07 | Journal article
DOI: 10.1103/physrevfluids.4.113601
Part of ISSN: 2469-990X
Source: Self-asserted source
Daiki Matsunaga

Controlling collective rotational patterns of magnetic rotors

Nature Communications
2019-10-16 | Journal article
DOI: 10.1038/s41467-019-12665-w
Contributors: Daiki Matsunaga; Joshua K. Hamilton; Fanlong Meng; Nick Bukin; Elizabeth L. Martin; Feodor Y. Ogrin; Julia M. Yeomans; Ramin Golestanian
Source: check_circle
Crossref

Tunable self-healing of magnetically propelling colloidal carpets

Nature Communications
2019-06-04 | Journal article
DOI: 10.1038/s41467-019-10255-4
Contributors: Helena Massana-Cid; Fanlong Meng; Daiki Matsunaga; Ramin Golestanian; Pietro Tierno
Source: check_circle
Crossref

A Numerical Analysis of Rheology of Capsule Suspensions Using a GPU-Accelerated Boundary Element Method

Frontiers in Computational Fluid-Structure Interaction and Flow Simulation
2018 | Book chapter
DOI: 10.1007/978-3-319-96469-0_6
Part of ISBN: 9783319964683
Part of ISBN: 9783319964690
Part of ISSN: 2164-3679
Part of ISSN: 2164-3725
Source: Self-asserted source
Daiki Matsunaga

Clustering of Magnetic Swimmers in a Poiseuille Flow

Physical Review Letters
2018 | Journal article
DOI: 10.1103/PhysRevLett.120.188101
EID:

2-s2.0-85046547461
Contributors: Meng, F.; Matsunaga, D.; Golestanian, R.
Source: Self-asserted source
Daiki Matsunaga via Scopus - Elsevier

Far-field theory for trajectories of magnetic ellipsoids in rectangular and circular channels

IMA Journal of Applied Mathematics
2018-07-25 | Journal article
DOI: 10.1093/imamat/hxy019
Part of ISSN: 0272-4960
Part of ISSN: 1464-3634
Source: Self-asserted source
Daiki Matsunaga

Focusing and Sorting of Ellipsoidal Magnetic Particles in Microchannels

Physical Review Letters
2017 | Journal article
DOI: 10.1103/PhysRevLett.119.198002
EID:

2-s2.0-85033600472
Contributors: Matsunaga, D.; Meng, F.; Zöttl, A.; Golestanian, R.; Yeomans, J.M.
Source: Self-asserted source
Daiki Matsunaga via Scopus - Elsevier

A numerical model of a red blood cell infected by Plasmodium falciparum malaria: coupling cell mechanics with ligand-receptor interactions

Science and Technology of Advanced Materials
2016 | Journal article
DOI: 10.1080/14686996.2016.1211462
EID:

2-s2.0-85019102068
Contributors: Ishida, S.; Imai, Y.; Ichikawa, Y.; Nix, S.; Matsunaga, D.; Omori, T.; Ishikawa, T.
Source: Self-asserted source
Daiki Matsunaga via Scopus - Elsevier

Deformation of a micro-Torque swimmer

Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences
2016 | Journal article
DOI: 10.1098/rspa.2015.0604
EID:

2-s2.0-84956866486
Contributors: Ishikawa, T.; Tanaka, T.; Imai, Y.; Omori, T.; Matsunaga, D.
Source: Self-asserted source
Daiki Matsunaga via Scopus - Elsevier

Reorientation of a single red blood cell during sedimentation

Journal of Fluid Mechanics
2016 | Journal article
DOI: 10.1017/jfm.2016.601
EID:

2-s2.0-84989233520
Contributors: Matsunaga, D.; Imai, Y.; Wagner, C.; Ishikawa, T.
Source: Self-asserted source
Daiki Matsunaga via Scopus - Elsevier

Deformation of a spherical capsule under oscillating shear flow

Journal of Fluid Mechanics
2015 | Journal article
DOI: 10.1017/jfm.2014.649
EID:

2-s2.0-85015225862
Contributors: Matsunaga, D.; Imai, Y.; Yamaguchi, T.; Ishikawa, T.
Source: Self-asserted source
Daiki Matsunaga via Scopus - Elsevier

Rheology of a dense suspension of spherical capsules under simple shear flow

Journal of Fluid Mechanics
2015 | Journal article
DOI: 10.1017/jfm.2015.666
EID:

2-s2.0-84949489021
Contributors: Matsunaga, D.; Imai, Y.; Yamaguchi, T.; Ishikawa, T.
Source: Self-asserted source
Daiki Matsunaga via Scopus - Elsevier

Shape matters: Near-field fluid mechanics dominate the collective motions of ellipsoidal squirmers

Physical Review E - Statistical, Nonlinear, and Soft Matter Physics
2015 | Journal article
DOI: 10.1103/PhysRevE.92.063027
EID:

2-s2.0-84954512000
Contributors: Kyoya, K.; Matsunaga, D.; Imai, Y.; Omori, T.; Ishikawa, T.
Source: Self-asserted source
Daiki Matsunaga via Scopus - Elsevier

A full GPU implementation of a numerical method for simulating capsule suspensions

Journal of Biomechanical Science and Engineering
2014 | Journal article
DOI: 10.1299/jbse.14-00039
EID:

2-s2.0-84923650040
Contributors: Matsunaga, D.; Imai, Y.; Omori, T.; Ishikawa, T.; Yamaguchi, T.
Source: Self-asserted source
Daiki Matsunaga via Scopus - Elsevier

Lateral migration of a spherical capsule near a plane wall in Stokes flow

Physical Review E - Statistical, Nonlinear, and Soft Matter Physics
2014 | Journal article
DOI: 10.1103/PhysRevE.90.043009
EID:

2-s2.0-84908426215
Contributors: Nix, S.; Imai, Y.; Matsunaga, D.; Yamaguchi, T.; Ishikawa, T.
Source: Self-asserted source
Daiki Matsunaga via Scopus - Elsevier

Peer review (7 reviews for 4 publications/grants)

Review activity for Cell reports physical science. (1)
Review activity for Chemical engineering science. (1)
Review activity for Communications physics. (1)
Review activity for Physics of fluids. (4)
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