Personal information

Activities

Employment (3)

Osaka University: Osaka, JP

2021-06 to present | Associate Professor (Graduate School of Engineering Science)
Employment
Source: Self-asserted source
Daiki Matsunaga

Osaka University: Osaka, JP

2018-08-01 to 2021-06 | Assistant Professor (Graduate School of Engineering Science)
Employment
Source: Self-asserted source
Daiki Matsunaga

University of Oxford: Oxford, Oxfordshire, GB

2016-04-01 to 2018-07-31 | Postdoctoral Research Assistant (Rudolf Peierls Centre for Theoretical Physics)
Employment
Source: Self-asserted source
Daiki Matsunaga

Education and qualifications (3)

Tohoku University: Sendai, JP

2013-04-01 to 2016-03-31 | PhD (Engineering) ( Department of Bioengineering and Robotics)
Education
Source: Self-asserted source
Daiki Matsunaga

Tohoku University: Sendai, JP

2011-04-01 to 2013-03-31 | Master degree ( Department of Bioengineering and Robotics)
Education
Source: Self-asserted source
Daiki Matsunaga

Tohoku University: Sendai, JP

2007-04-01 to 2011-03-31 | Batchelor's degree (Department of Mechanical and Aerospace Engineering)
Education
Source: Self-asserted source
Daiki Matsunaga

Works (35)

Mapping molecular diffusion across the whole cell with spatial statistics-based FRAP

2025-02-08 | Preprint
Contributors: Yohei Okabe; Takumi Saito; Outa Nakashima; Daiki Matsunaga; Shinji Deguchi
Source: check_circle
Crossref

Diffusion model predicts the geometry of actin cytoskeleton from cell morphology

PLOS Computational Biology
2024-08-05 | Journal article
Contributors: Honghan Li; Stefan Klumpp; Shiyou Liu; Shinji Deguchi; Daiki Matsunaga
Source: check_circle
Crossref

Asymmetric bistability of chiral particle orientation in viscous shear flows

Proceedings of the National Academy of Sciences
2023-11-07 | Journal article
Contributors: Andreas Zöttl; Francesca Tesser; Daiki Matsunaga; Justine Laurent; Olivia du Roure; Anke Lindner
Source: check_circle
Crossref

Knowledge “installed” diffusion model predicts the geometry of actin cytoskeleton from cell morphology

2023-01-16 | Preprint
Contributors: Honghan Li; Shiyou Liu; Shinji Deguchi; Daiki Matsunaga
Source: check_circle
Crossref

A model explaining environmental stiffness-dependent migration of fibroblasts with a focus on maturation of intracellular structures

2022-12-31 | Preprint
Contributors: Natsuki Saito; Tsubasa S Matsui; Daiki Matsunaga; Kana Furukawa; Shinji Deguchi
Source: check_circle
Crossref

Field-controlling patterns of sheared ferrofluid droplets

Physics of Fluids
2022-06 | Journal article
Contributors: Shunichi Ishida; Yaochen Yang; Fanlong Meng; Daiki Matsunaga
Source: check_circle
Crossref

Particle segregation using crystal-like structure of capsules in wall-bounded shear flow

Physical Review Fluids
2022-06-10 | Journal article
Part of ISSN: 2469-990X
Source: Self-asserted source
Daiki Matsunaga
grade
Preferred source (of 2)‎

Analysis of chemical and mechanical behaviors in living cells by continuum mechanics-based FRAP

2022-04-16 | Preprint
Contributors: Takumi Saito; Daiki Matsunaga; Shinji Deguchi
Source: check_circle
Crossref

Wrinkle force microscopy: a machine learning based approach to predict cell mechanics from images

Communications Biology
2022-04-14 | Journal article
Contributors: Honghan Li; Daiki Matsunaga; Tsubasa S. Matsui; Hiroki Aosaki; Genki Kinoshita; Koki Inoue; Amin Doostmohammadi; Shinji Deguchi
Source: check_circle
Crossref

A model for determining the length distribution of actin filaments in cells

2022-03-18 | Preprint
Contributors: Yuika Ueda; Daiki Matsunaga; Shinji Deguchi
Source: check_circle
Crossref

Determining the domain-level reaction-diffusion properties of an actin-binding protein transgelin-2 within cells

Experimental Cell Research
2021-07 | Journal article
Contributors: Takumi Saito; Daiki Matsunaga; Tsubasa S. Matsui; Kentaro Noi; Shinji Deguchi
Source: check_circle
Crossref

Magnetic Microswimmers Exhibit Bose-Einstein-like Condensation

Physical Review Letters
2021-02-16 | Journal article
Contributors: Fanlong Meng; Daiki Matsunaga; Benoît Mahault; Ramin Golestanian
Source: check_circle
Crossref

Wrinkle force microscopy: a new machine learning based approach to predict cell mechanics from images

2021-02-01 | Preprint
Contributors: Honghan Li; Daiki Matsunaga; Tsubasa S. Matsui; Hiroki Aosaki; Koki Inoue; Amin Doostmohammadi; Shinji Deguchi
Source: check_circle
Crossref

Complex viscosity of dilute capsule suspensions: a numerical study

Journal of Biomechanical Science and Engineering
2020 | Journal article
Part of ISSN: 1880-9863
Source: Self-asserted source
Daiki Matsunaga

Degenerate states, emergent dynamics and fluid mixing by magnetic rotors

Soft Matter
2020 | Journal article
Contributors: Takuma Kawai; Daiki Matsunaga; Fanlong Meng; Julia M. Yeomans; Ramin Golestanian
Source: check_circle
Crossref

Rheology of a dilute ferrofluid droplet suspension in shear flow: Viscosity and normal stress differences

Physical Review Fluids
2020-12-15 | Journal article
Contributors: Shunichi Ishida; Daiki Matsunaga
Source: check_circle
Crossref

Image based cellular contractile force evaluation with small-world network inspired CNN: SW-UNet

Biochemical and Biophysical Research Communications
2020-09 | Journal article
Contributors: Honghan Li; Daiki Matsunaga; Tsubasa S. Matsui; Hiroki Aosaki; Shinji Deguchi
Source: check_circle
Crossref

Diffusion and collective motion of rotlets in 2D space*

Chinese Physics B
2020-06-01 | Journal article
Part of ISSN: 1674-1056
Source: Self-asserted source
Daiki Matsunaga

Multi-well plate cell contraction assay detects negatively correlated cellular responses to pharmacological inhibitors in contractility and migration

Biochemical and Biophysical Research Communications
2020-01 | Journal article
Part of ISSN: 0006-291X
Source: Self-asserted source
Daiki Matsunaga

Magnetically-actuated artificial cilium: a simple theoretical model

Soft Matter
2019 | Journal article
Part of ISSN: 1744-683X
Part of ISSN: 1744-6848
Source: Self-asserted source
Daiki Matsunaga

Shear viscosity of bimodal capsule suspensions in simple shear flow

Physical Review Fluids
2019-11-07 | Journal article
Part of ISSN: 2469-990X
Source: Self-asserted source
Daiki Matsunaga

Controlling collective rotational patterns of magnetic rotors

Nature Communications
2019-10-16 | Journal article
Contributors: Daiki Matsunaga; Joshua K. Hamilton; Fanlong Meng; Nick Bukin; Elizabeth L. Martin; Feodor Y. Ogrin; Julia M. Yeomans; Ramin Golestanian
Source: check_circle
Crossref

Tunable self-healing of magnetically propelling colloidal carpets

Nature Communications
2019-06-04 | Journal article
Contributors: Helena Massana-Cid; Fanlong Meng; Daiki Matsunaga; Ramin Golestanian; Pietro Tierno
Source: check_circle
Crossref

A Numerical Analysis of Rheology of Capsule Suspensions Using a GPU-Accelerated Boundary Element Method

Frontiers in Computational Fluid-Structure Interaction and Flow Simulation
2018 | Book chapter
Part of ISBN: 9783319964683
Part of ISBN: 9783319964690
Part of ISSN: 2164-3679
Part of ISSN: 2164-3725
Source: Self-asserted source
Daiki Matsunaga

Clustering of Magnetic Swimmers in a Poiseuille Flow

Physical Review Letters
2018 | Journal article
EID:

2-s2.0-85046547461

Contributors: Meng, F.; Matsunaga, D.; Golestanian, R.
Source: Self-asserted source
Daiki Matsunaga via Scopus - Elsevier

Far-field theory for trajectories of magnetic ellipsoids in rectangular and circular channels

IMA Journal of Applied Mathematics
2018-07-25 | Journal article
Part of ISSN: 0272-4960
Part of ISSN: 1464-3634
Source: Self-asserted source
Daiki Matsunaga

Focusing and Sorting of Ellipsoidal Magnetic Particles in Microchannels

Physical Review Letters
2017 | Journal article
EID:

2-s2.0-85033600472

Contributors: Matsunaga, D.; Meng, F.; Zöttl, A.; Golestanian, R.; Yeomans, J.M.
Source: Self-asserted source
Daiki Matsunaga via Scopus - Elsevier

A numerical model of a red blood cell infected by Plasmodium falciparum malaria: coupling cell mechanics with ligand-receptor interactions

Science and Technology of Advanced Materials
2016 | Journal article
EID:

2-s2.0-85019102068

Contributors: Ishida, S.; Imai, Y.; Ichikawa, Y.; Nix, S.; Matsunaga, D.; Omori, T.; Ishikawa, T.
Source: Self-asserted source
Daiki Matsunaga via Scopus - Elsevier

Deformation of a micro-Torque swimmer

Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences
2016 | Journal article
EID:

2-s2.0-84956866486

Contributors: Ishikawa, T.; Tanaka, T.; Imai, Y.; Omori, T.; Matsunaga, D.
Source: Self-asserted source
Daiki Matsunaga via Scopus - Elsevier

Reorientation of a single red blood cell during sedimentation

Journal of Fluid Mechanics
2016 | Journal article
EID:

2-s2.0-84989233520

Contributors: Matsunaga, D.; Imai, Y.; Wagner, C.; Ishikawa, T.
Source: Self-asserted source
Daiki Matsunaga via Scopus - Elsevier

Deformation of a spherical capsule under oscillating shear flow

Journal of Fluid Mechanics
2015 | Journal article
EID:

2-s2.0-85015225862

Contributors: Matsunaga, D.; Imai, Y.; Yamaguchi, T.; Ishikawa, T.
Source: Self-asserted source
Daiki Matsunaga via Scopus - Elsevier

Rheology of a dense suspension of spherical capsules under simple shear flow

Journal of Fluid Mechanics
2015 | Journal article
EID:

2-s2.0-84949489021

Contributors: Matsunaga, D.; Imai, Y.; Yamaguchi, T.; Ishikawa, T.
Source: Self-asserted source
Daiki Matsunaga via Scopus - Elsevier

Shape matters: Near-field fluid mechanics dominate the collective motions of ellipsoidal squirmers

Physical Review E - Statistical, Nonlinear, and Soft Matter Physics
2015 | Journal article
EID:

2-s2.0-84954512000

Contributors: Kyoya, K.; Matsunaga, D.; Imai, Y.; Omori, T.; Ishikawa, T.
Source: Self-asserted source
Daiki Matsunaga via Scopus - Elsevier

A full GPU implementation of a numerical method for simulating capsule suspensions

Journal of Biomechanical Science and Engineering
2014 | Journal article
EID:

2-s2.0-84923650040

Contributors: Matsunaga, D.; Imai, Y.; Omori, T.; Ishikawa, T.; Yamaguchi, T.
Source: Self-asserted source
Daiki Matsunaga via Scopus - Elsevier

Lateral migration of a spherical capsule near a plane wall in Stokes flow

Physical Review E - Statistical, Nonlinear, and Soft Matter Physics
2014 | Journal article
EID:

2-s2.0-84908426215

Contributors: Nix, S.; Imai, Y.; Matsunaga, D.; Yamaguchi, T.; Ishikawa, T.
Source: Self-asserted source
Daiki Matsunaga via Scopus - Elsevier

Peer review (7 reviews for 4 publications/grants)

Review activity for Cell reports physical science. (1)
Review activity for Chemical engineering science. (1)
Review activity for Communications physics. (1)
Review activity for Physics of fluids. (4)