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Employment (2)

Johns Hopkins University: Md., Md., US

2017-02-15 to 2018-05-01 | Research Technician (Medicine)
Employment
Source: Self-asserted source
Katharine Jenike

Seattle Genetics (United States): Bothell, Washington, US

2015-10-01 to 2017-02-01 | Research Associate (contractor) (Target Validation)
Employment
Source: Self-asserted source
Katharine Jenike

Education and qualifications (1)

Whitman College: Walla Walla, Washington, US

2011-09-01 to 2015-05-01 | BA (Biology)
Education
Source: Self-asserted source
Katharine Jenike

Works (16)

k-mer approaches for biodiversity genomics

Genome Research
2025-01-31 | Journal article
DOI: 10.1101/gr.279452.124
Contributors: Katharine M. Jenike; Lucía Campos-Domínguez; Marilou Boddé; José Cerca; Christina N. Hodson; Michael C. Schatz; Kamil S. Jaron
Source: check_circle
Crossref

Gapless assembly of complete human and plant chromosomes using only nanopore sequencing

Genome Research
2024-11 | Journal article
DOI: 10.1101/gr.279334.124
Contributors: Sergey Koren; Zhigui Bao; Andrea Guarracino; Shujun Ou; Sara Goodwin; Katharine M. Jenike; Julian Lucas; Brandy McNulty; Jimin Park; Mikko Rautiainen et al.
Source: check_circle
Crossref

Solanum pan-genomics and pan-genetics reveal paralogs as contingencies in crop engineering

2024-09-14 | Preprint
DOI: 10.1101/2024.09.10.612244
Contributors: Matthias Benoit; Katharine M Jenike; James W Satterlee; Srividya Ramakrishnan; Iacopo Gentile; Anat Hendelman; Michael J Passalacqua; Hamsini Suresh; Hagai Shohat; Gina M Robitaille et al.
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Crossref

Convergent evolution of plant prickles by repeated gene co-option over deep time

Science
2024-08-02 | Journal article
DOI: 10.1126/science.ado1663
Contributors: James W. Satterlee; David Alonso; Pietro Gramazio; Katharine M. Jenike; Jia He; Andrea Arrones; Gloria Villanueva; Mariola Plazas; Srividya Ramakrishnan; Matthias Benoit et al.
Source: check_circle
Crossref

MEM-based pangenome indexing fork-mer queries

2024-05-22 | Preprint
DOI: 10.1101/2024.05.20.595044
Contributors: Stephen Hwang; Nathaniel K. Brown; Omar Y. Ahmed; Katharine M. Jenike; Sam Kovaka; Michael C. Schatz; Ben Langmead
Source: check_circle
Crossref

Gapless assembly of complete human and plant chromosomes using only nanopore sequencing

2024-03-17 | Preprint
DOI: 10.1101/2024.03.15.585294
Contributors: Sergey Koren; Zhigui Bao; Andrea Guarracino; Shujun Ou; Sara Goodwin; Katharine M Jenike; Julian Lucas; Brandy McNulty; Jimin Park; Mikko Rautianinen et al.
Source: check_circle
Crossref

Uncalled4 improves nanopore DNA and RNA modification detection via fast and accurate signal alignment

2024-03-11 | Preprint
DOI: 10.1101/2024.03.05.583511
Contributors: Sam Kovaka; Paul W. Hook; Katharine M. Jenike; Vikram Shivakumar; Luke B. Morina; Roham Razaghi; Winston Timp; Michael C. Schatz
Source: check_circle
Crossref

Convergent evolution of plant prickles is driven by repeated gene co-option over deep time

2024-02-22 | Preprint
DOI: 10.1101/2024.02.21.581474
Contributors: James W. Satterlee; David Alonso; Pietro Gramazio; Katharine M. Jenike; Jia He; Andrea Arrones; Gloria Villanueva; Mariola Plazas; Srividya Ramakrishnan; Matthias Benoit et al.
Source: check_circle
Crossref

Expression Microdissection for use in qPCR based analysis of miRNA in a single cell type

2022-06-28 | Preprint
DOI: 10.1101/2022.06.24.497524
Contributors: Ana E. Jenike; Brady Bunkelman; Kira A. Perzel Mandell; Cliff Oduor; Deborah Chin; Devin Mair; Katharine M. Jenike; Deok-Ho Kim; Jeffrey A. Bailey; Miriam H. Rafailovich et al.
Source: check_circle
Crossref

TCR-mimic bispecific antibodies to target the HIV-1 reservoir

Proceedings of the National Academy of Sciences
2022-04-12 | Journal article
DOI: 10.1073/pnas.2123406119
Part of ISSN: 0027-8424
Part of ISSN: 1091-6490
Source: Self-asserted source
Katharine Jenike

The XPB Subunit of the TFIIH Complex Plays a Critical Role in HIV-1 Transcription, and XPB Inhibition by Spironolactone Prevents HIV-1 Reactivation from Latency

Journal of Virology
2021-01-28 | Journal article
DOI: 10.1128/jvi.01247-20
Part of ISSN: 0022-538X
Part of ISSN: 1098-5514
Source: Self-asserted source
Katharine Jenike

Filgotinib suppresses HIV-1–driven gene transcription by inhibiting HIV-1 splicing and T cell activation

Journal of Clinical Investigation
2020-08-17 | Journal article
DOI: 10.1172/jci137371
Part of ISSN: 0021-9738
Part of ISSN: 1558-8238
Source: Self-asserted source
Katharine Jenike

Longitudinal study reveals HIV-1–infected CD4+ T cell dynamics during long-term antiretroviral therapy

Journal of Clinical Investigation
2020-06-02 | Journal article
DOI: 10.1172/jci135953
Part of ISSN: 0021-9738
Part of ISSN: 1558-8238
Source: Self-asserted source
Katharine Jenike

Targeting HIV-1-driven aberrant transcription and proliferation

Journal of Virus Eradication
2019-12 | Journal article
DOI: 10.1016/s2055-6640(20)30192-8
Part of ISSN: 2055-6640
Source: Self-asserted source
Katharine Jenike

The Landscape of Persistent Viral Genomes in ART-Treated SIV, SHIV, and HIV-2 Infections

Cell Host & Microbe
2019-07 | Journal article
DOI: 10.1016/j.chom.2019.06.005
Part of ISSN: 1931-3128
Source: Self-asserted source
Katharine Jenike

A quantitative approach for measuring the reservoir of latent HIV-1 proviruses.

Nature
2019-01-30 | Journal article
DOI: 10.1038/s41586-019-0898-8
PMID: 30700913
PMC: PMC6447073
Source: Self-asserted source
Katharine Jenike
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