Personal information

Emails & domains

Verified email addresses

Websites & social links

Homepage
GitHub

Other IDs

Loop profile: 1176753

Keywords

Bioinformatics, Machine learning

Countries

China

Activities

Collapse all

Employment (2)

Fudan University: Shanghai, Shanghai, CN

2021-07-01 to present | Research assistant (Big Data Biology lab)
Employment
Source: Self-asserted source
Hui Chong

Huazhong University of Science and Technology: Wuhan, Hubei, CN

2019-11-01 to 2021-06-30 | Research assistant (Department of Bioinformatics and Systems Biology)
Employment
Source: Self-asserted source
Hui Chong

Education and qualifications (1)

Huazhong University of Science and Technology: Wuhan, Hubei, CN

2017-09-01 to 2021-06-30 | B.E. (Bioinformatics and Systems Biology)
Education
Source: Self-asserted source
Hui Chong

Professional activities (1)

Microbiome Virtual International Forum: Shanghai, Shanghai, CN

2021-11-09 to present | Steering Committee
Service
Source: Self-asserted source
Hui Chong

Works (13)

argNorm: normalization of antibiotic resistance gene annotations to the Antibiotic Resistance Ontology (ARO)

2025-04-14 | Other
DOI: 10.1093/bioinformatics/btaf173
Contributors: Svetlana Ugarcina Perovic; Vedanth Ramji; Hui Chong; Yiqian Duan; Finlay Maguire; Luis Pedro Coelho
Source: check_circle
Crossref

Computational exploration of the global microbiome for antibiotic discovery

2023-08-31 | Preprint | Author
DOI: 10.1101/2023.08.31.555663
Contributors: Célio Dias Santos Júnior; Torres, M. D. T.; Yiqian Duan; Álvaro Rodríguez del Río; Thomas S.B. Schmidt; Hui Chong; Anthony Fullam; Michael Kuhn; Chengkai zhu; Amy Houseman et al.
Source: Self-asserted source
Hui Chong
grade
Preferred source (of 2)‎

Tracing human life trajectory using gut microbial communities by context-aware deep learning

Briefings in Bioinformatics
2023-01-19 | Journal article
DOI: 10.1093/bib/bbac629
Contributors: Haohong Zhang; Hui Chong; Qingyang Yu; Yuguo Zha; Mingyue Cheng; Kang Ning
Source: check_circle
Crossref

Ontology-aware deep learning enables ultrafast and interpretable source tracking among sub-million microbial community samples from hundreds of niches

Genome Medicine
2022-12 | Journal article
DOI: 10.1186/s13073-022-01047-5
Part of ISSN: 1756-994X
Source: Self-asserted source
Hui Chong

EXPERT: transfer learning-enabled context-aware microbial community classification

Briefings in Bioinformatics
2022-11-19 | Journal article
DOI: 10.1093/bib/bbac396
Contributors: Hui Chong; Yuguo Zha; Qingyang Yu; Mingyue Cheng; Guangzhou Xiong; Nan Wang; Xinhe Huang; Shijuan Huang; Chuqing Sun; Sicheng Wu et al.
Source: check_circle
Crossref

Meta-Prism 2.0: Enabling algorithm and web server for ultra-fast, memory-efficient, and accurate analysis among millions of microbial community samples

GigaScience
2022-07-28 | Journal article
DOI: 10.1093/gigascience/giac073
Contributors: Kai Kang; Hui Chong; Kang Ning
Source: check_circle
Crossref

Microbial dark matter: from discovery to applications

Genomics, Proteomics & Bioinformatics
2022-04 | Journal article
DOI: 10.1016/j.gpb.2022.02.007
Part of ISSN: 1672-0229
Source: Self-asserted source
Hui Chong
grade
Preferred source (of 2)‎

Microbiome Sample Comparison and Search: From Pair-Wise Calculations to Model-Based Matching

Frontiers in Microbiology
2021 | Journal article
DOI: 10.3389/fmicb.2021.642439
Part of ISSN: 1664-302X
Source: Self-asserted source
Hui Chong

Reliable and Interpretable Mortality Prediction With Strong Foresight in COVID-19 Patients: An International Study From China and Germany

Frontiers in Artificial Intelligence
2021 | Journal article
DOI: 10.3389/frai.2021.672050
Part of ISSN: 2624-8212
Source: Self-asserted source
Hui Chong

EXPERT: Transfer Learning-enabled context-aware microbial source tracking

2021-01-31 | Preprint
DOI: 10.1101/2021.01.29.428751
Contributors: Hui Chong; Qingyang Yu; Yuguo Zha; Guangzhou Xiong; Nan Wang; Xinhe Huang; Shijuan Huang; Chuqing Sun; Sicheng Wu; Wei-Hua Chen et al.
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Utilizing microbiome approaches to assist source tracking, treatment and prevention of COVID-19: Review and Assessment

Computational and Structural Biotechnology Journal
2020-11 | Journal article
DOI: 10.1016/j.csbj.2020.11.027
Part of ISSN: 2001-0370
Source: Self-asserted source
Hui Chong

Meta-Prism 2.0: Enabling algorithm for ultra-fast, accurate and memory-efficient search among millions of microbial community samples

2020-11-20 | Preprint
DOI: 10.1101/2020.11.17.387811
Contributors: Kai Kang; Hui Chong; Kang Ning
Source: check_circle
Crossref

Ontology-Aware Deep Learning Enables Ultrafast, Accurate and Interpretable Source Tracking among Sub-Million Microbial Community Samples from Hundreds of Niches

2020-11-02 | Preprint
DOI: 10.1101/2020.11.01.364208
Contributors: Yuguo Zha; Hui Chong; Hao Qiu; Kai Kang; Yuzheng Dun; Zhixue Chen; Xuefeng Cui; Kang Ning
Source: check_circle
Crossref
How many people are using ORCID?