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Works (13)

Large-Scale Computational Modeling of H5 Influenza Variants Against HA1-Neutralizing Antibodies

2024-07-17 | Preprint
Contributors: Colby T. Ford; Shirish Yasa; Khaled Obeid; Rafael Jaimes, III; Phillip J. Tomezsko; Sayal Guirales-Medrano; Richard Allen White, III; Daniel Janies
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Occurrence of the Indo-West Pacific starfish Luidia magnifica (Echinodermata: Asteroidea) in the Mexican Pacific and a possible introduction to the Caribbean region

Marine Biodiversity
2024-02 | Journal article
Contributors: Cristian M. Galván-Villa; Francisco A. Solís-Marín; Karen Lopez; Janessa Cobb; Leopoldo Díaz-Pérez; Carlos R. Rezende-Ventura; Nataly Slivak; Colby T. Ford; Daniel A. Janies
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Predicting Antibody and ACE2 Affinity for SARS-CoV-2 BA.2.86 and JN.1 withIn SilicoProtein Modeling and Docking

2023-11-23 | Preprint
Contributors: Shirish Yasa; Sayal Guirales-Medrano; Denis Jacob Machado; Colby T. Ford; Daniel Janies
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Implementing landscape genetics in molecular epidemiology to determine drivers of vector‐borne disease: A malaria case study

Molecular Ecology
2023-04 | Journal article
Contributors: Alfred Hubbard; Elizabeth Hemming‐Schroeder; Maxwell Gesuge Machani; Yaw Afrane; Guiyun Yan; Eugenia Lo; Daniel Janies
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Predicting changes in neutralizing antibody activity for SARS-CoV-2 XBB.1.5 usingin silicoprotein modeling

2023-02-13 | Preprint
Contributors: Colby T. Ford; Shirish Yasa; Denis Jacob Machado; Richard Allen White, III; Daniel Janies
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EchinoDB: an update to the web-based application for genomic and transcriptomic data on echinoderms

BMC Genomic Data
2022-10-23 | Journal article
Contributors: Varnika Mittal; Robert W. Reid; Denis Jacob Machado; Vladimir Mashanov; Daniel A. Janies
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EchinoDB: An update to the web-based application for genomic and transcriptomic data on echinoderms

2022-01-05 | Preprint
Contributors: Varnika Mittal; Robert W. Reid; Denis Jacob Machado; Vladimir Mashanov; Daniel A. Janies
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Fundamentals of genomic epidemiology, lessons learned from the coronavirus disease 2019 (COVID-19) pandemic, and new directions

Antimicrobial Stewardship & Healthcare Epidemiology
2021 | Journal article
Contributors: Denis Jacob Machado; Richard Allen White, III; Janice Kofsky; Daniel A. Janies
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Protein interaction analysis of Plasmodium falciparum circumsporozoite protein variants with human immunoproteins explains RTS,S vaccine efficacy in Ghana

2021-12-30 | Preprint
Contributors: Cheikh Cambel Dieng; Colby T. Ford; Anita Lerch; Dickson Donu; Jennifer Huynh; Kovidh Vegesna; Jun-tao Guo; Daniel A. Janies; Linda Amoah; Yaw Afrane et al.
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Fundamental evolution of all Orthocoronavirinae including three deadly lineages descendent from Chiroptera‐hosted coronaviruses: SARS‐CoV, MERS‐CoV and SARS‐CoV‐2

Cladistics
2021-10 | Journal article
Contributors: Denis Jacob Machado; Rachel Scott; Sayal Guirales; Daniel A. Janies
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Sequencing Data of North American SARS-CoV-2 Isolates Shows Widespread Complex Variants

2021-01-29 | Other
Contributors: Colby T. Ford; Rachel Scott; Denis Jacob Machado; Daniel Janies
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A Novel Machine Learning Framework for Comparison of Viral COVID-19–Related Sina Weibo and Twitter Posts: Workflow Development and Content Analysis

Journal of Medical Internet Research
2021-01-06 | Journal article
Contributors: Shi Chen; Lina Zhou; Yunya Song; Qian Xu; Ping Wang; Kanlun Wang; Yaorong Ge; Daniel Janies
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A Novel Machine Learning Framework for Comparison of Viral COVID-19–Related Sina Weibo and Twitter Posts: Workflow Development and Content Analysis (Preprint)

2020-10-12 | Other
Contributors: Shi Chen; Lina Zhou; Yunya Song; Qian Xu; Ping Wang; Kanlun Wang; Yaorong Ge; Daniel Janies
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Peer review (3 reviews for 2 publications/grants)

Review activity for EBioMedicine. (2)
Review activity for The Lancet microbe. (1)