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electron microscopy

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Works (50 of 53)

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Page 1 of 2

Structure of RNA polymerase I transcribing ribosomal DNA genes.

2016-11 | Journal article
DOI: 10.1038/nature20561
PMID: 27842382
Contributors: Neyer S; Kunz M; Geiss C; Hantsche M; Hodirnau VV; Seybert A; Engel C; Scheffer MP; Cramer P; Frangakis AS
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Helical arrays of U-shaped ATP synthase dimers form tubular cristae in ciliate mitochondria.

2016-07 | Journal article
DOI: 10.1073/pnas.1525430113
PMID: 27402755
PMC: PMC4968746
Contributors: Mühleip AW; Joos F; Wigge C; Frangakis AS; Kühlbrandt W; Davies KM
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

A flexible, multilayered protein scaffold maintains the slit in between glomerular podocytes.

2016-06 | Journal article
PMID: 27430022
PMC: PMC4943462
Contributors: Grahammer F; Wigge C; Schell C; Kretz O; Patrakka J; Schneider S; Klose M; Arnold SJ; Habermann A; Bräuniger R et al.
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Three-dimensional CTF correction improves the resolution of electron tomograms.

2016-06 | Journal article
DOI: 10.1016/j.jsb.2016.06.016
PMID: 27343995
Contributors: Kunz M; Frangakis AS
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

M-free: Mask-independent scoring of the reference bias.

2015-11 | Journal article
DOI: 10.1016/j.jsb.2015.08.016
PMID: 26325584
Contributors: Kunz M; Yu Z; Frangakis AS
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Quantitative analysis of cytoskeletal reorganization during epithelial tissue sealing by large-volume electron tomography.

2015-05 | Journal article
DOI: 10.1038/ncb3159
PMID: 25893916
Contributors: Eltsov M; Dubé N; Yu Z; Pasakarnis L; Haselmann-Weiss U; Brunner D; Frangakis AS
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

PLEKHM1 regulates Salmonella-containing vacuole biogenesis and infection.

2015-01 | Journal article
DOI: 10.1016/j.chom.2014.11.011
PMID: 25500191
Contributors: McEwan DG; Richter B; Claudi B; Wigge C; Wild P; Farhan H; McGourty K; Coxon FP; Franz-Wachtel M; Perdu B et al.
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Super-sampling SART with ordered subsets.

2014-11 | Journal article
DOI: 10.1016/j.jsb.2014.09.010
PMID: 25281496
Contributors: Kunz M; Frangakis AS
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

M-free: scoring the reference bias in sub-tomogram averaging and template matching.

2014-07 | Journal article
DOI: 10.1016/j.jsb.2014.05.007
PMID: 24859794
Contributors: Yu Z; Frangakis AS
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Correlative light- and electron microscopy with chemical tags.

2014-05 | Journal article
DOI: 10.1016/j.jsb.2014.03.018
PMID: 24698954
Contributors: Perkovic M; Kunz M; Endesfelder U; Bunse S; Wigge C; Yu Z; Hodirnau VV; Scheffer MP; Seybert A; Malkusch S et al.
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

CENP-A arrays are more condensed than canonical arrays at low ionic strength.

2014-02 | Journal article
DOI: 10.1016/j.bpj.2014.01.005
PMID: 24559990
PMC: PMC3944588
Contributors: Geiss CP; Keramisanou D; Sekulic N; Scheffer MP; Black BE; Frangakis AS
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Three-dimensional visualization of the molecular architecture of cell-cell junctions in situ by cryo-electron tomography of vitreous sections.

2013 | Journal article
DOI: 10.1007/978-1-62703-227-8_4
PMID: 23325637
Contributors: Al-Amoudi A; Frangakis AS
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

3D Ultrastructural organization of whole Chlamydomonas reinhardtii cells studied by nanoscale soft x-ray tomography.

2012 | Journal article
DOI: 10.1371/journal.pone.0053293
PMID: 23300909
PMC: PMC3534036
Contributors: Hummel E; Guttmann P; Werner S; Tarek B; Schneider G; Kunz M; Frangakis AS; Westermann B
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Heritable yeast prions have a highly organized three-dimensional architecture with interfiber structures.

2012-09 | Journal article
DOI: 10.1073/pnas.1211976109
PMID: 22927413
PMC: PMC3443181
Contributors: Saibil HR; Seybert A; Habermann A; Winkler J; Eltsov M; Perkovic M; Castaño-Diez D; Scheffer MP; Haselmann U; Chlanda P et al.
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Nucleosomes stacked with aligned dyad axes are found in native compact chromatin in vitro.

2012-05 | Journal article
DOI: 10.1016/j.jsb.2011.11.020
PMID: 22138167
Contributors: Scheffer MP; Eltsov M; Bednar J; Frangakis AS
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Room temperature L1₀ phase transformation in binary CoPt nanostructures prepared by focused-electron-beam-induced deposition.

2012-05 | Journal article
DOI: 10.1088/0957-4484/23/18/185702
PMID: 22499135
Contributors: Porrati F; Begun E; Winhold M; Schwalb ChH; Sachser R; Frangakis AS; Huth M
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Special issue on electron tomography.

2012-05 | Journal article
DOI: 10.1016/j.jsb.2012.03.004
PMID: 22445943
Contributors: Medalia O; Frangakis A
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Human mitotic chromosomes consist predominantly of irregularly folded nucleosome fibres without a 30-nm chromatin structure.

2012-04 | Journal article
DOI: 10.1038/emboj.2012.35
PMID: 22343941
PMC: PMC3321210
Contributors: Nishino Y; Eltsov M; Joti Y; Ito K; Takata H; Takahashi Y; Hihara S; Frangakis AS; Imamoto N; Ishikawa T et al.
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Atheroprotective communication between endothelial cells and smooth muscle cells through miRNAs.

2012-02 | Journal article
DOI: 10.1038/ncb2441
PMID: 22327366
Contributors: Hergenreider E; Heydt S; Tréguer K; Boettger T; Horrevoets AJ; Zeiher AM; Scheffer MP; Frangakis AS; Yin X; Mayr M et al.
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Binary Pt-Si nanostructures prepared by focused electron-beam-induced deposition.

2011-12 | Journal article
DOI: 10.1021/nn203134a
PMID: 22050515
Contributors: Winhold M; Schwalb CH; Porrati F; Sachser R; Frangakis AS; Kämpken B; Terfort A; Auner N; Huth M
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Evidence for short-range helical order in the 30-nm chromatin fibers of erythrocyte nuclei.

2011-10 | Journal article
DOI: 10.1073/pnas.1108268108
PMID: 21969536
PMC: PMC3193215
Contributors: Scheffer MP; Eltsov M; Frangakis AS
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Classification of electron sub-tomograms with neural networks and its application to template-matching.

2011-06 | Journal article
DOI: 10.1016/j.jsb.2011.02.009
PMID: 21382496
Contributors: Yu Z; Frangakis AS
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

The three-dimensional molecular structure of the desmosomal plaque.

2011-04 | Journal article
DOI: 10.1073/pnas.1019469108
PMID: 21464301
PMC: PMC3081036
Contributors: Al-Amoudi A; Castaño-Diez D; Devos DP; Russell RB; Johnson GT; Frangakis AS
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Structure of reconstituted bacterial membrane efflux pump by cryo-electron tomography.

2010-10 | Journal article
DOI: 10.1016/j.bbamem.2010.06.019
PMID: 20599691
Contributors: Trépout S; Taveau JC; Benabdelhak H; Granier T; Ducruix A; Frangakis AS; Lambert O
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Alignator: a GPU powered software package for robust fiducial-less alignment of cryo tilt-series.

2010-04 | Journal article
DOI: 10.1016/j.jsb.2010.01.014
PMID: 20117216
Contributors: Castaño-Díez D; Scheffer M; Al-Amoudi A; Frangakis AS
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Quantitative and spatio-temporal features of protein aggregation in Escherichia coli and consequences on protein quality control and cellular ageing.

2010-03 | Journal article
DOI: 10.1038/emboj.2009.412
PMID: 20094032
PMC: PMC2837176
Contributors: Winkler J; Seybert A; König L; Pruggnaller S; Haselmann U; Sourjik V; Weiss M; Frangakis AS; Mogk A; Bukau B
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Visualization of macromolecular structures.

2010-03 | Journal article
DOI: 10.1038/nmeth.1427
PMID: 20195256
Contributors: O'Donoghue SI; Goodsell DS; Frangakis AS; Jossinet F; Laskowski RA; Nilges M; Saibil HR; Schafferhans A; Wade RC; Westhof E et al.
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Proteome organization in a genome-reduced bacterium.

2009-11 | Journal article
DOI: 10.1126/science.1176343
PMID: 19965468
Contributors: Kühner S; van Noort V; Betts MJ; Leo-Macias A; Batisse C; Rode M; Yamada T; Maier T; Bader S; Beltran-Alvarez P et al.
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Cytoplasmic relaxation of active Eph controls ephrin shedding by ADAM10.

2009-10 | Journal article
DOI: 10.1371/journal.pbio.1000215
PMID: 19823572
PMC: PMC2753297
Contributors: Janes PW; Wimmer-Kleikamp SH; Frangakis AS; Treble K; Griesshaber B; Sabet O; Grabenbauer M; Ting AY; Saftig P; Bastiaens PI et al.
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Analysis of cryo-electron microscopy images does not support the existence of 30-nm chromatin fibers in mitotic chromosomes in situ.

2008-12 | Journal article
DOI: 10.1073/pnas.0810057105
PMID: 19064912
PMC: PMC2604964
Contributors: Eltsov M; Maclellan KM; Maeshima K; Frangakis AS; Dubochet J
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

A visualization and segmentation toolbox for electron microscopy.

2008-10 | Journal article
DOI: 10.1016/j.jsb.2008.05.003
PMID: 18691905
Contributors: Pruggnaller S; Mayr M; Frangakis AS
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Performance evaluation of image processing algorithms on the GPU.

2008-10 | Journal article
DOI: 10.1016/j.jsb.2008.07.006
PMID: 18692140
Contributors: Castaño-Díez D; Moser D; Schoenegger A; Pruggnaller S; Frangakis AS
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Structural studies on desmosomes.

2008-04 | Journal article
DOI: 10.1042/bst0360181
PMID: 18363559
Contributors: Al-Amoudi A; Frangakis AS
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Classification of cryo-electron sub-tomograms using constrained correlation.

2008-03 | Journal article
DOI: 10.1016/j.jsb.2007.07.006
PMID: 17720536
Contributors: Förster F; Pruggnaller S; Seybert A; Frangakis AS
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Reprint of "Fiducial-less alignment of cryo-sections" [J. Struct. Biol. 159 (2007) 413-423].

2008-03 | Journal article
DOI: 10.1016/s1047-8477(08)00060-9
PMID: 18342740
Contributors: Castaño-Díez D; Al-Amoudi A; Glynn AM; Seybert A; Frangakis AS
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

The molecular architecture of cadherins in native epidermal desmosomes.

2007-12 | Journal article
DOI: 10.1038/nature05994
PMID: 18064004
Contributors: Al-Amoudi A; Díez DC; Betts MJ; Frangakis AS
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Fiducial-less alignment of cryo-sections.

2007-09 | Journal article
DOI: 10.1016/j.jsb.2007.04.014
PMID: 17651988
Contributors: Castaño-Díez D; Al-Amoudi A; Glynn AM; Seybert A; Frangakis AS
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Implementation and performance evaluation of reconstruction algorithms on graphics processors.

2007-01 | Journal article
DOI: 10.1016/j.jsb.2006.08.010
PMID: 17029985
Contributors: Castaño Díez D; Mueller H; Frangakis AS
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Plastic-embedded protein crystals.

2007-01 | Journal article
DOI: 10.1107/s0909049506043111
PMID: 17211079
Contributors: Ravelli RB; Haselmann-Weiss U; McGeehan JE; McCarthy AA; Marquez JA; Antony C; Frangakis AS; Stranzl G
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Visualization of cell microtubules in their native state.

2007-01 | Journal article
DOI: 10.1042/bc20060081
PMID: 17049046
Contributors: Bouchet-Marquis C; Zuber B; Glynn AM; Eltsov M; Grabenbauer M; Goldie KN; Thomas D; Frangakis AS; Dubochet J; Chrétien D
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Structural analysis of Mycoplasma pneumoniae by cryo-electron tomography.

2006-11 | Journal article
DOI: 10.1016/j.jsb.2006.04.010
PMID: 16875842
Contributors: Seybert A; Herrmann R; Frangakis AS
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Multiple large filament bundles observed in Caulobacter crescentus by electron cryotomography.

2006-10 | Journal article
DOI: 10.1111/j.1365-2958.2006.05355.x
PMID: 16987173
Contributors: Briegel A; Dias DP; Li Z; Jensen RB; Frangakis AS; Jensen GJ
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Tilt-series and electron microscope alignment for the correction of the non-perpendicularity of beam and tilt-axis.

2006-05 | Journal article
DOI: 10.1016/j.jsb.2005.12.009
PMID: 16503168
Contributors: Díez DC; Seybert A; Frangakis AS
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Cryo-electron tomography reveals the cytoskeletal structure of Spiroplasma melliferum.

2005-01 | Journal article
DOI: 10.1126/science.1104031
PMID: 15662018
Contributors: Kürner J; Frangakis AS; Baumeister W
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Computational exploration of structural information from cryo-electron tomograms.

2004-06 | Journal article
DOI: 10.1016/j.sbi.2004.04.003
PMID: 15193312
Contributors: Frangakis AS; Förster F
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Segmentation of two- and three-dimensional data from electron microscopy using eigenvector analysis.

2002 | Journal article
DOI: 10.1016/s1047-8477(02)00032-1
PMID: 12160706
Contributors: Frangakis AS; Hegerl R
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Macromolecular architecture in eukaryotic cells visualized by cryoelectron tomography.

2002-11 | Journal article
DOI: 10.1126/science.1076184
PMID: 12424373
Contributors: Medalia O; Weber I; Frangakis AS; Nicastro D; Gerisch G; Baumeister W
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Identification of macromolecular complexes in cryoelectron tomograms of phantom cells.

2002-10 | Journal article
DOI: 10.1073/pnas.172520299
PMID: 12391313
PMC: PMC137853
Contributors: Frangakis AS; Böhm J; Förster F; Nickell S; Nicastro D; Typke D; Hegerl R; Baumeister W
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

Noise reduction in electron tomographic reconstructions using nonlinear anisotropic diffusion.

2001-09 | Journal article
DOI: 10.1006/jsbi.2001.4406
PMID: 11722164
Contributors: Frangakis AS; Hegerl R
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central

FhuA-mediated phage genome transfer into liposomes: a cryo-electron tomography study.

2001-08 | Journal article
DOI: 10.1016/s0960-9822(01)00349-9
PMID: 11516947
Contributors: Böhm J; Lambert O; Frangakis AS; Letellier L; Baumeister W; Rigaud JL
Source: Self-asserted source
Achilleas Frangakis via Europe PubMed Central
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