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Scopus Author ID: 23992248900
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Employment (3)

Ohio State University: Columbus, OH, US

2020-01-13 to present | Associate Professor (Department of Biomedical Informatics)
Employment
Source: Self-asserted source
Dongjun Chung

Medical University of South Carolina: Charleston, SC, US

2014-08-01 to 2020-01-10 | Assistant Professor of Biostatistics (Department of Public Health Sciences)
Employment
Source: Self-asserted source
Dongjun Chung

Yale University: New Haven, CT, US

2013-01-01 to 2014-07-31 | Postdoctoral Associate (Department of Biostatistics)
Employment
Source: Self-asserted source
Dongjun Chung

Education and qualifications (1)

University of Wisconsin Madison: Madison, WI, US

2007-09-01 to 2012-08-30 | PhD in Statistics (Department of Statistics)
Education
Source: Self-asserted source
Dongjun Chung

Funding (4)

Statistical Power Calculation Framework for Spatially Resolved Transcriptomics Experiments

2022-06-01 to 2024-05-31 | Grant
National Human Genome Research Institute (Bethesda, US)
URL: https://app.dimensions.ai/details/grant/grant.12911433
GRANT_NUMBER: R21HG012482
Source: Self-asserted source
Dongjun Chung via DimensionsWizard

The Genetic Basis of Opioid Dependence Vulnerablility in a Rodent Model

2018-09-30 to 2023-07-31 | Grant
National Institute on Drug Abuse (Bethesda, US)
URL: https://app.dimensions.ai/details/grant/grant.7908691
GRANT_NUMBER: U01DA045300
Source: Self-asserted source
Dongjun Chung via DimensionsWizard

Algorithms for Literature-Guided Multi-Platform Identification of Cancer Subtypes

Source: Self-asserted source
Dongjun Chung via DimensionsWizard

Statistical Models for Genetic Studies, Using Network and Integrative Analysis

2016-07-21 to 2021-04-30 | Grant
National Institute of General Medical Sciences (Bethesda, US)
URL: https://grants.uberresearch.com/100000057/R01GM122078/Statistical-Models-for-Genetic-Studies-Using-Network-and-Integrative-Analysis
GRANT_NUMBER: R01GM122078
Source: Self-asserted source
Dongjun Chung via DimensionsWizard

Works (50 of 75)

Items per page:
Page 1 of 2

A novel TLR4 accessory molecule drives hepatic oncogenesis through tumor-associated macrophages

Cancer Letters
2025-04 | Journal article
DOI: 10.1016/j.canlet.2025.217543
Contributors: Doyeon Kim; Carter A. Allen; Dongjun Chung; Lingbin Meng; Xiaoli Zhang; Wenqing Zhang; Yuli Ouyang; Zihai Li; Feng Hong
Source: check_circle
Crossref

spaDesign: A Statistical Framework to Improve the Design of Sequencing-based Spatial Transcriptomics Experiments

2024-09-14 | Preprint
DOI: 10.1101/2024.09.10.612260
Contributors: Juan Xie; Hyeongseon Jeon; Won Chang; Yeseul Jeon; Zihai Li; Qin Ma; Dongjun Chung
Source: check_circle
Crossref

Collaborative Job Seeking for People with Autism: Challenges and Design Opportunities

2024-05-11 | Conference paper
DOI: 10.1145/3613904.3642197
Contributors: Zinat Ara; Amrita Ganguly; Donna Peppard; Dongjun Chung; Slobodan Vucetic; Vivian Genaro Motti; Sungsoo Ray Hong
Source: check_circle
Crossref

A Bayesian framework for pathway‐guided identification of cancer subgroups by integrating multiple types of genomic data

Statistics in Medicine
2023-12-10 | Journal article
DOI: 10.1002/sim.9911
Contributors: Zequn Sun; Dongjun Chung; Brian Neelon; Andrew Millar‐Wilson; Stephen P. Ethier; Feifei Xiao; Yinan Zheng; Kristin Wallace; Gary Hardiman
Source: check_circle
Crossref

multi-GPA-Tree: Statistical approach for pleiotropy informed and functional annotation tree guided prioritization of GWAS results

PLOS Computational Biology
2023-12-07 | Journal article
DOI: 10.1371/journal.pcbi.1011686
Contributors: Aastha Khatiwada; Mingyao Li; Ayse Selen Yilmaz; Bethany J. Wolf; Maciej Pietrzak; Dongjun Chung
Source: check_circle
Crossref

Long-Term Impact of Daily E-cigarette Exposure on the Lungs of Asthmatic Mice

Nicotine and Tobacco Research
2023-11-22 | Journal article
DOI: 10.1093/ntr/ntad100
Contributors: Min-Ae Song; Loren E Wold; David M Aslaner; Kellie J Archer; Devki Patel; Hyeongseon Jeon; Dongjun Chung; Peter G Shields; John W Christman; Sangwoon Chung
Source: check_circle
Crossref

A Bayesian Multivariate Mixture Model for High Throughput Spatial Transcriptomics

Biometrics
2023-09-01 | Journal article
DOI: 10.1111/biom.13727
Contributors: Carter Allen; Yuzhou Chang; Brian Neelon; Won Chang; Hang J. Kim; Zihai Li; Qin Ma; Dongjun Chung
Source: check_circle
Crossref

LRT: Integrative analysis of scRNA-seq and scTCR-seq data to investigate clonal differentiation heterogeneity

PLOS Computational Biology
2023-07-10 | Journal article
DOI: 10.1371/journal.pcbi.1011300
Contributors: Juan Xie; Mengjie Chen; Hyeongseon Jeon; Gang Xin; Qin Ma; Dongjun Chung
Source: check_circle
Crossref

Data from Remodeling Translation Primes CD8<sup>+</sup> T-cell Antitumor Immunity

2023-04-04 | Preprint
DOI: 10.1158/2326-6066.c.6550122.v1
Contributors: Katie E. Hurst; Kiley A. Lawrence; Rob A. Robino; Lauren E. Ball; Dongjun Chung; Jessica E. Thaxton
Source: check_circle
Crossref

Data from Remodeling Translation Primes CD8<sup>+</sup> T-cell Antitumor Immunity

2023-04-04 | Preprint
DOI: 10.1158/2326-6066.c.6550122
Contributors: Katie E. Hurst; Kiley A. Lawrence; Rob A. Robino; Lauren E. Ball; Dongjun Chung; Jessica E. Thaxton
Source: check_circle
Crossref

Supplementary Figures from Remodeling Translation Primes CD8<sup>+</sup> T-cell Antitumor Immunity

2023-04-04 | Preprint
DOI: 10.1158/2326-6066.22543050.v1
Contributors: Katie E. Hurst; Kiley A. Lawrence; Rob A. Robino; Lauren E. Ball; Dongjun Chung; Jessica E. Thaxton
Source: check_circle
Crossref

Supplementary Figures from Remodeling Translation Primes CD8<sup>+</sup> T-cell Antitumor Immunity

2023-04-04 | Preprint
DOI: 10.1158/2326-6066.22543050
Contributors: Katie E. Hurst; Kiley A. Lawrence; Rob A. Robino; Lauren E. Ball; Dongjun Chung; Jessica E. Thaxton
Source: check_circle
Crossref

Supplementary Table 1 from Remodeling Translation Primes CD8<sup>+</sup> T-cell Antitumor Immunity

2023-04-04 | Preprint
DOI: 10.1158/2326-6066.22543047.v1
Contributors: Katie E. Hurst; Kiley A. Lawrence; Rob A. Robino; Lauren E. Ball; Dongjun Chung; Jessica E. Thaxton
Source: check_circle
Crossref

Supplementary Table 1 from Remodeling Translation Primes CD8<sup>+</sup> T-cell Antitumor Immunity

2023-04-04 | Preprint
DOI: 10.1158/2326-6066.22543047
Contributors: Katie E. Hurst; Kiley A. Lawrence; Rob A. Robino; Lauren E. Ball; Dongjun Chung; Jessica E. Thaxton
Source: check_circle
Crossref

Statistical Power Analysis for Designing Bulk, Single-Cell, and Spatial Transcriptomics Experiments: Review, Tutorial, and Perspectives

Biomolecules
2023-01-24 | Journal article
DOI: 10.3390/biom13020221
Contributors: Hyeongseon Jeon; Juan Xie; Yeseul Jeon; Kyeong Joo Jung; Arkobrato Gupta; Won Chang; Dongjun Chung
Source: check_circle
Crossref

Envelope‐based partial partial least squares with application to cytokine‐based biomarker analysis for COVID‐19

Statistics in Medicine
2022-10-15 | Journal article
DOI: 10.1002/sim.9526
Contributors: Yeonhee Park; Zhihua Su; Dongjun Chung
Source: check_circle
Crossref

Selective targeting of GARP-LTGFβ axis in the tumor microenvironment augments PD-1 blockade via enhancing CD8+T cell antitumor immunity

Journal for ImmunoTherapy of Cancer
2022-09 | Journal article
DOI: 10.1136/jitc-2022-005433
Contributors: Anqi Li; Yuzhou Chang; No-Joon Song; Xingjun Wu; Dongjun Chung; Brian P Riesenberg; Maria Velegraki; Giuseppe D Giuliani; Komal Das; Tamio Okimoto et al.
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Crossref

LRT: T Cell Trajectory Inference by Integrative Analysis of Single-Cell TCR-seq and RNA-seq data

2022-04-14 | Preprint
DOI: 10.1101/2022.04.14.488320
Contributors: Juan Xie; Gang Xin; Qin Ma; Dongjun Chung
Source: check_circle
Crossref

Analysis of community connectivity in spatial transcriptomics data

2022-04-12 | Preprint
DOI: 10.1101/2022.04.11.487907
Contributors: Carter Allen; Kyeong Joo Jung; Yuzhou Chang; Qin Ma; Dongjun Chung
Source: check_circle
Crossref

MAPLE: A Hybrid Framework for Multi-Sample Spatial Transcriptomics Data

2022-03-02 | Preprint
DOI: 10.1101/2022.02.28.482296
Contributors: Carter Allen; Yuzhou Chang; Qin Ma; Dongjun Chung
Source: check_circle
Crossref

GPA-Tree: statistical approach for functional-annotation-tree-guided prioritization of GWAS results

Bioinformatics
2022-01-27 | Journal article
DOI: 10.1093/bioinformatics/btab802
Contributors: Aastha Khatiwada; Bethany J Wolf; Ayse Selen Yilmaz; Paula S Ramos; Maciej Pietrzak; Andrew Lawson; Kelly J Hunt; Hang J Kim; Dongjun Chung; Janet Kelso
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Crossref

Trefoil factor 2 secreted from damaged hepatocytes activates hepatic stellate cells to induce fibrogenesis

Journal of Biological Chemistry
2021-07 | Journal article
DOI: 10.1016/j.jbc.2021.100887
Contributors: Bichen Zhang; Kalina Lapenta; Qi Wang; Jin Hyun Nam; Dongjun Chung; Marie E. Robert; Michael H. Nathanson; Xiaoyong Yang
Source: check_circle
Crossref

A Bayesian Multivariate Mixture Model for Spatial Transcriptomics Data

2021-06-24 | Other
DOI: 10.1101/2021.06.23.449615
Contributors: Carter Allen; Yuzhou Chang; Brian Neelon; Won Chang; Hang J. Kim; Zihai Li; Qin Ma; Dongjun Chung
Source: check_circle
Crossref

Induced Torpor as a Countermeasure for Low Dose Radiation Exposure in a Zebrafish Model

Cells
2021-04-14 | Journal article
DOI: 10.3390/cells10040906
Contributors: Thomas Cahill; Willian Abraham da Silveira; Ludivine Renaud; Tucker Williamson; Hao Wang; Dongjun Chung; Ian Overton; Sherine S. L. Chan; Gary Hardiman
Source: check_circle
Crossref

Differential immune signatures in the tumor microenvironment are associated with colon cancer racial disparities

Cancer Medicine
2021-03 | Journal article
DOI: 10.1002/cam4.3753
Contributors: Thomas Curran; Zequn Sun; Brielle Gerry; Victoria J. Findlay; Kristin Wallace; Zihai Li; Chrystal Paulos; Marvella Ford; Mark P. Rubinstein; Dongjun Chung et al.
Source: check_circle
Crossref

BiMM tree: a decision tree method for modeling clustered and longitudinal binary outcomes

Communications in Statistics: Simulation and Computation
2020 | Journal article
DOI: 10.1080/03610918.2018.1490429
EID:

2-s2.0-85053547892

Part of ISBN:

15324141 03610918
Contributors: Speiser, J.L.; Wolf, B.J.; Chung, D.; Karvellas, C.J.; Koch, D.G.; Durkalski, V.L.
Source: Self-asserted source
Dongjun Chung via Scopus - Elsevier

hubViz: A novel tool for hub-centric visualization

Chemometrics and Intelligent Laboratory Systems
2020 | Journal article
DOI: 10.1016/j.chemolab.2020.104071
EID:

2-s2.0-85086883213

Part of ISBN:

18733239 01697439
Contributors: Nam, J.H.; Yun, J.; Jin, I.H.; Chung, D.
Source: Self-asserted source
Dongjun Chung via Scopus - Elsevier

OGT suppresses S6K1-mediated macrophage inflammation and metabolic disturbance

Proceedings of the National Academy of Sciences of the United States of America
2020 | Journal article
DOI: 10.1073/pnas.1916121117
EID:

2-s2.0-85088179508

Part of ISBN:

10916490 00278424
Contributors: Yang, Y.; Li, X.; Luan, H.H.; Zhang, B.; Zhang, K.; Nam, J.H.; Li, Z.; Fu, M.; Munk, A.; Zhang, D. et al.
Source: Self-asserted source
Dongjun Chung via Scopus - Elsevier

Ranking subjects based on paired compositional data with application to age-related hearing loss subtyping

Communications for Statistical Applications and Methods
2020 | Journal article
DOI: 10.29220/CSAM.2020.27.2.225
EID:

2-s2.0-85086234743

Part of ISBN:

23834757 22877843
Contributors: Nam, J.H.; Khatiwada, A.; Matthews, L.J.; Schulte, B.A.; Dubno, J.R.; Chung, D.
Source: Self-asserted source
Dongjun Chung via Scopus - Elsevier

PALMER: improving pathway annotation based on the biomedical literature mining with a constrained latent block model

BMC Bioinformatics
2020-12 | Journal article
DOI: 10.1186/s12859-020-03756-3
Contributors: Jin Hyun Nam; Daniel Couch; Willian A. da Silveira; Zhenning Yu; Dongjun Chung
Source: check_circle
Crossref

RNA binding protein PCBP1 is an intracellular immune checkpoint for shaping T cell responses in cancer immunity

Science Advances
2020-05-29 | Journal article
DOI: 10.1126/sciadv.aaz3865
Contributors: Ephraim A. Ansa-Addo; Huai-Cheng Huang; Brian Riesenberg; Supinya Iamsawat; Davis Borucki; Michelle H. Nelson; Jin Hyun Nam; Dongjun Chung; Chrystal M. Paulos; Bei Liu et al.
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Remodeling Translation Primes CD8+ T-cell Antitumor Immunity

Cancer Immunology Research
2020-05-01 | Journal article
DOI: 10.1158/2326-6066.CIR-19-0516
Contributors: Katie E. Hurst; Kiley A. Lawrence; Rob A. Robino; Lauren E. Ball; Dongjun Chung; Jessica E. Thaxton
Source: check_circle
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Automating a process convolution approach to account for spatial information in imaging mass spectrometry data

Spatial Statistics
2020-04 | Journal article
DOI: 10.1016/j.spasta.2020.100422
Contributors: Cameron Miller; Andrew Lawson; Dongjun Chung; Mulugeta Gebregziabher; Elizabeth Yeh; Richard Drake; Elizabeth Hill
Source: check_circle
Crossref
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R package mosaics

2020-02-25 | Software
DOI: 10.5281/ZENODO.3687188
Source: Self-asserted source
Dongjun Chung

Defects in the exocyst-cilia machinery cause bicuspid aortic valve disease and aortic stenosis

Circulation
2019 | Journal article
DOI: 10.1161/CIRCULATIONAHA.119.038376
EID:

2-s2.0-85073183923

Part of ISBN:

15244539 00097322
Contributors: Fulmer, D.; Toomer, K.; Guo, L.; Moore, K.; Glover, J.; Moore, R.; Stairley, R.; Lobo, G.; Zuo, X.; Dang, Y. et al.
Source: Self-asserted source
Dongjun Chung via Scopus - Elsevier

Gail: An interactive webserver for inference and dynamic visualization of gene-gene associations based on gene ontology guided mining of biomedical literature

PLoS ONE
2019 | Journal article
DOI: 10.1371/journal.pone.0219195
EID:

2-s2.0-85069269449

Part of ISBN:

19326203
Contributors: Couch, D.; Yu, Z.; Nam, J.H.; Allen, C.; Ramos, P.S.; da Silveira, W.A.; Hunt, K.J.; Hazard, E.S.; Hardiman, G.; Lawson, A. et al.
Source: Self-asserted source
Dongjun Chung via Scopus - Elsevier

Molecular profiling of RNA tumors using high-throughput RNA sequencing: From raw data to systems level analyses

Methods in Molecular Biology
2019 | Book chapter
DOI: 10.1007/978-1-4939-9004-7_13
EID:

2-s2.0-85060059073

Part of ISBN:

10643745
Contributors: da Silveira, W.A.; Hazard, E.S.; Chung, D.; Hardiman, G.
Source: Self-asserted source
Dongjun Chung via Scopus - Elsevier

O-GlcNAc transferase suppresses necroptosis and liver fibrosis

JCI Insight
2019 | Journal article
DOI: 10.1172/jci.insight.127709
EID:

2-s2.0-85077623712

Part of ISBN:

23793708
Contributors: Zhang, B.; Li, M.-D.; Yin, R.; Liu, Y.; Yang, Y.; Mitchell-Richards, K.A.; Nam, J.H.; Li, R.; Wang, L.; Iwakiri, Y. et al.
Source: Self-asserted source
Dongjun Chung via Scopus - Elsevier

Predicting daily outcomes in acetaminophen-induced acute liver failure patients with machine learning techniques

Computer Methods and Programs in Biomedicine
2019 | Journal article
DOI: 10.1016/j.cmpb.2019.04.012
EID:

2-s2.0-85064322867

Part of ISBN:

18727565 01692607
Contributors: Speiser, J.L.; Karvellas, C.J.; Wolf, B.J.; Chung, D.; Koch, D.G.; Durkalski, V.L.
Source: Self-asserted source
Dongjun Chung via Scopus - Elsevier

Semi-supervised identification of cancer subgroups using survival outcomes and overlapping grouping information

Statistical Methods in Medical Research
2019-07 | Journal article
DOI: 10.1177/0962280217752980
Contributors: Wei Wei; Zequn Sun; Willian A da Silveira; Zhenning Yu; Andrew Lawson; Gary Hardiman; Linda E Kelemen; Dongjun Chung
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BiMM forest: A random forest method for modeling clustered and longitudinal binary outcomes

Chemometrics and Intelligent Laboratory Systems
2019-02 | Journal article
DOI: 10.1016/j.chemolab.2019.01.002
Contributors: Jaime Lynn Speiser; Bethany J. Wolf; Dongjun Chung; Constantine J. Karvellas; David G. Koch; Valerie L. Durkalski
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Sex as a predictor of response to cancer immunotherapy

The Lancet Oncology
2018 | Journal article
DOI: 10.1016/S1470-2045(18)30445-5
EID:

2-s2.0-85050808049

Part of ISBN:

14745488 14702045
Contributors: Kwon, H.; Lin, C.Y.; Chung, D.; Li, X.; Li, Z.
Source: Self-asserted source
Dongjun Chung via Scopus - Elsevier

Sex Differences in Using Systemic Inflammatory Markers to Prognosticate Patients with Head and Neck Squamous Cell Carcinoma

Cancer Epidemiology, Biomarkers & Prevention
2018-10-01 | Journal article
DOI: 10.1158/1055-9965.EPI-18-0408
Contributors: Ching Ying Lin; Hyunwoo Kwon; Guillermo O. Rangel Rivera; Xue Li; Dongjun Chung; Zihai Li
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miRmapper: A Tool for Interpretation of miRNA–mRNA Interaction Networks

Genes
2018-09 | Journal article | Author
DOI: 10.3390/genes9090458
Contributors: Willian A. da Silveira; Ludivine Renaud; Jonathan Simpson; William B. Glen; E. Starr Hazard; Dongjun Chung; Gary Hardiman
Source: check_circle
Multidisciplinary Digital Publishing Institute
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Improving SNP prioritization and pleiotropic architecture estimation by incorporating prior knowledge using graph-GPA

Bioinformatics
2018-06-15 | Journal article
DOI: 10.1093/bioinformatics/bty061
Contributors: Hang J Kim; Zhenning Yu; Andrew Lawson; Hongyu Zhao; Dongjun Chung; Oliver Stegle
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ShinyGPA: An interactive visualization toolkit for investigating pleiotropic architecture using GWAS datasets

PLOS ONE
2018-01-08 | Journal article
DOI: 10.1371/journal.pone.0190949
Contributors: Emma Kortemeier; Giuseppe Novelli; Paula S. Ramos; Kelly J. Hunt; Hang J. Kim; Gary Hardiman; Dongjun Chung
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Data exploration, quality control and statistical analysis of ChIP-exo/nexus experiments

Nucleic Acids Research
2017 | Journal article
DOI: 10.1093/nar/gkx594
EID:

2-s2.0-85032867096

Part of ISBN:

13624962 03051048
Contributors: Welch, R.; Chung, D.; Grass, J.; Landick, R.; Keleş, S.
Source: Self-asserted source
Dongjun Chung via Scopus - Elsevier

Genomics pipelines and data integration: challenges and opportunities in the research setting

Expert Review of Molecular Diagnostics
2017 | Journal article
DOI: 10.1080/14737159.2017.1282822
EID:

2-s2.0-85013339559

Part of ISBN:

17448352 14737159
Contributors: Davis-Turak, J.; Courtney, S.M.; Hazard, E.S.; Glen, W.B.; da Silveira, W.A.; Wesselman, T.; Harbin, L.P.; Wolf, B.J.; Chung, D.; Hardiman, G.
Source: Self-asserted source
Dongjun Chung via Scopus - Elsevier

The LZIP: A Bayesian latent factor model for correlated zero-inflated counts

Biometrics
2017 | Journal article
DOI: 10.1111/biom.12558
EID:

2-s2.0-84994079300

Part of ISBN:

15410420 0006341X
Contributors: Neelon, B.; Chung, D.
Source: Self-asserted source
Dongjun Chung via Scopus - Elsevier

The Plasticizer Bisphenol A Perturbs the Hepatic Epigenome: A Systems Level Analysis of the miRNome

Genes
2017-10-13 | Journal article
DOI: 10.3390/genes8100269
Contributors: Ludivine Renaud; Willian A. da Silveira; E. Starr Hazard; Jonathan Simpson; Silvia Falcinelli; Dongjun Chung; Oliana Carnevali; Gary Hardiman
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Peer review (3 reviews for 2 publications/grants)

Review activity for Molecular systems biology. (1)
Review activity for Nature communications (2)
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