Personal information

Websites & social links

Twitter/X
Researchgate
BlueSky

Other IDs

Scopus Author ID: 55804106000

Activities

Collapse all

Employment (1)

Wroclaw University of Environmental and Life Sciences: Wrocław, PL

2018-05-01 to present | Research fellow (Department of Biochemistry and Molecular Biology)
Employment
Source: Self-asserted source
Rafal Kolenda

Works (28)

adhesiomeR: a tool for Escherichia coli adhesin classification and analysis

BMC Genomics
2024-06-17 | Journal article
DOI: 10.1186/s12864-024-10525-6
Part of ISSN: 1471-2164
Contributors: Katarzyna Sidorczuk; Michał Burdukiewicz; Klara Cerk; Joachim Fritscher; Robert A. Kingsley; Peter Schierack; Falk Hildebrand; Rafał Kolenda
Source: Self-asserted source
Rafal Kolenda

FdeC expression regulates motility and adhesion of the avian pathogenic Escherichia coli strain IMT5155

Veterinary Research
2024-05-31 | Journal article | Author
DOI: 10.1186/s13567-024-01327-5
Part of ISSN: 1297-9716
Contributors: Adrianna Aleksandrowicz; Rikke Brødsgaard Kjærup; Krzysztof Grzymajło; Fernando Garcia Martinez; Javier Muñoz; Dominika Borowska; Samantha Sives; Lonneke Vervelde; Tina Sørensen Dalgaard; Robert A. Kingsley et al.
Source: Self-asserted source
Rafal Kolenda

Characterization of clumpy adhesion of Escherichia coli to human cells and associated factors influencing antibiotic sensitivity

Microbiology Spectrum
2024-05-02 | Journal article
DOI: 10.1128/spectrum.02606-23
Contributors: Muhammad Moman Khan; Katarzyna Sidorczuk; Juliane Becker; Adrianna Aleksandrowicz; Karolina Baraniewicz; Christina Ludwig; Aamir Ali; Robert A. Kingsley; Peter Schierack; Rafał Kolenda et al.
Source: check_circle
Crossref

imputomics: web server and R package for missing values imputation in metabolomics data

Bioinformatics
2024-03-04 | Journal article
DOI: 10.1093/bioinformatics/btae098
Contributors: Jarosław Chilimoniuk; Krystyna Grzesiak; Jakub Kała; Dominik Nowakowski; Adam Krętowski; Rafał Kolenda; Michał Ciborowski; Michał Burdukiewicz; Jonathan Wren
Source: check_circle
Crossref

SanA is an inner membrane protein mediating the early stages of Salmonella infection

2024-01-05 | Preprint
DOI: 10.1101/2024.01.05.574334
Contributors: Adrianna Aleksandrowicz; Rafał Kolenda; Teresa L M Thurston; Krzysztof Grzymajło
Source: check_circle
Crossref

Profiling of the Helicobacter pylori redox switch HP1021 regulon using a multi-omics approach

Nature Communications
2023-10-23 | Journal article
DOI: 10.1038/s41467-023-42364-6
Contributors: Mateusz Noszka; Agnieszka Strzałka; Jakub Muraszko; Rafał Kolenda; Chen Meng; Christina Ludwig; Kerstin Stingl; Anna Zawilak-Pawlik
Source: check_circle
Crossref

Profiling of theHelicobacter pyloriredox switch HP1021 regulon using a multi-omics approach

2023-06-19 | Preprint
DOI: 10.1101/2023.06.19.544759
Contributors: Mateusz Noszka; Agnieszka Strzałka; Jakub Muraszko; Rafał Kolenda; Chen Meng; Christina Ludwig; Kerstin Stingl; Anna Zawilak-Pawlik
Source: check_circle
Crossref

Benchmarks in antimicrobial peptide prediction are biased due to the selection of negative data

Briefings in Bioinformatics
2022-09-20 | Journal article
DOI: 10.1093/bib/bbac343
Contributors: Katarzyna Sidorczuk; Przemysław Gagat; Filip Pietluch; Jakub Kała; Dominik Rafacz; Laura Bąkała; Jadwiga Słowik; Rafał Kolenda; Stefan Rödiger; Legana C H W Fingerhut et al.
Source: check_circle
Crossref

Benchmarks in antimicrobial peptide prediction are biased due to the selection of negative data

2022-05-30 | Preprint
DOI: 10.1101/2022.05.30.493946
Contributors: Katarzyna Sidorczuk; Przemysław Gagat; Filip Pietluch; Jakub Kała; Dominik Rafacz; Laura Bąkała; Jadwiga Słowik; Rafał Kolenda; Stefan Rödiger; Legana C H W Fingerhut et al.
Source: check_circle
Crossref

Application of Loop-Mediated Isothermal Amplification (LAMP) in Sex Identification of Parrots Bred in Egypt

Biology
2022-04 | Journal article | Author
DOI: 10.3390/biology11040565
Contributors: Sara M. Elnomrosy; Naglaa M. Hagag; Mohamed I. AbdAllah; Rafal Kolenda; Maciej Zacharski
Source: check_circle
Multidisciplinary Digital Publishing Institute
grade
Preferred source (of 2)‎

Adhesion of Enteropathogenic, Enterotoxigenic, and Commensal Escherichia coli to the Major Zymogen Granule Membrane Glycoprotein 2

Applied and Environmental Microbiology
2022-03-08 | Journal article
DOI: 10.1128/aem.02279-21
Contributors: Christin Bartlitz; Rafał Kolenda; Jarosław Chilimoniuk; Krzysztof Grzymajło; Stefan Rödiger; Rolf Bauerfeind; Aamir Ali; Veronika Tchesnokova; Dirk Roggenbuck; Peter Schierack et al.
Source: check_circle
Crossref

Genome placement of alpha-haemolysin cluster is associated with alpha-haemolysin sequence variation, adhesin and iron acquisition factor profile of Escherichia coli

Microbial Genomics
2021-12-24 | Journal article
DOI: 10.1099/mgen.0.000743
Contributors: Rafał Kolenda; Katarzyna Sidorczuk; Mateusz Noszka; Adrianna Aleksandrowicz; Muhammad Moman Khan; Michał Burdukiewicz; Derek Pickard; Peter Schierack
Source: check_circle
Crossref

Whatever makes them stick – Adhesins of avian pathogenic Escherichia coli

Veterinary Microbiology
2021-06 | Journal article
DOI: 10.1016/j.vetmic.2021.109095
Contributors: Adrianna Aleksandrowicz; Muhammad Moman Khan; Katarzyna Sidorczuk; Mateusz Noszka; Rafał Kolenda
Source: check_circle
Crossref

Investigation of Commensal Escherichia coli Populations of Cormorant Hatchlings in the Absence of Anthropogenic Impacts in Remote Areas of West Mongolia

Microorganisms
2021-02-12 | Journal article
DOI: 10.3390/microorganisms9020372
Contributors: Muhammad Moman Khan; Rafal Kolenda; Peter Schierack; Jörg Weinreich; Stefan Rödiger; Jakob Schierack; Michael Stubbe; Davaa Lkhagvasuren; Sebastian Guenther; Katharina Schaufler
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Novel Avian Pathogenic Escherichia coli Genes Responsible for Adhesion to Chicken and Human Cell Lines

Applied and Environmental Microbiology
2020-10 | Journal article
DOI: 10.1128/AEM.01068-20
Contributors: Aamir Ali; Rafał Kolenda; Muhammad Moman Khan; Jörg Weinreich; Ganwu Li; Lothar H. Wieler; Karsten Tedin; Dirk Roggenbuck; Peter Schierack; Johanna Björkroth
Source: check_circle
Crossref

Identification of natural mutations responsible for altered infection phenotypes of Salmonella enterica clinical isolates using cell line infection screens

Applied and Environmental Microbiology
2020-10-30 | Journal article
DOI: 10.1128/aem.02177-20
Part of ISSN: 0099-2240
Part of ISSN: 1098-5336
Source: Self-asserted source
Rafal Kolenda
grade
Preferred source (of 2)‎

Genomic and Phenotypic Analysis of an ESBL-Producing E. coli ST1159 Clonal Lineage From Wild Birds in Mongolia

Frontiers in Microbiology
2020-07-21 | Journal article
DOI: 10.3389/fmicb.2020.01699
Part of ISSN: 1664-302X
Source: Self-asserted source
Rafal Kolenda

Everything You Always Wanted to Know About Salmonella Type 1 Fimbriae, but Were Afraid to Ask

2019-05-14 | Journal article
DOI: 10.3389/fmicb.2019.01017
Part of ISSN: 1664-302X
Source: Self-asserted source
Rafal Kolenda

Adhesion of Salmonella to pancreatic secretory granule membrane major glycoprotein GP2 of human and porcine origin depends on FimH sequence variation

Frontiers in Microbiology
2018 | Journal article
DOI: 10.3389/fmicb.2018.01905
EID:

2-s2.0-85052635634
Contributors: Kolenda, R.; Burdukiewicz, M.; Schiebel, J.; Rödiger, S.; Sauer, L.; Szabo, I.; Orlowska, A.; Weinreich, J.; Nitschke, J.; Böhm, A. et al.
Source: Self-asserted source
Rafal Kolenda via Scopus - Elsevier

Mucosal Autoimmunity to Cell-Bound GP2 Isoforms Is a Sensitive Marker in PSC and Associated With the Clinical Phenotype

2018-08-28 | Journal article
DOI: 10.3389/fimmu.2018.01959
Part of ISSN: 1664-3224
Source: Self-asserted source
Rafal Kolenda

Expression of metallothionein in the liver and kidneys of the red deer (Cervus elaphus L.) from an industrial metal smelting area of Poland

Ecotoxicology and Environmental Safety
2017 | Journal article
DOI: 10.1016/j.ecoenv.2016.11.018
EID:

2-s2.0-84999622158
Contributors: Durkalec, M.; Kolenda, R.; Owczarek, T.; Szkoda, J.; Nawrocka, A.; Grzegrzółka, J.; Dzięgiel, P.; Socha, P.; Kołacz, R.; Schierack, P. et al.
Source: Self-asserted source
Rafal Kolenda via Scopus - Elsevier

The novel type 1 fimbriae FimH receptor calreticulin plays a role in Salmonella host specificity

Frontiers in Cellular and Infection Microbiology
2017 | Journal article
DOI: 10.3389/fcimb.2017.00326
EID:

2-s2.0-85027559998
Contributors: Grzymajlo, K.; Ugorski, M.; Suchanski, J.; Kedzierska, A.E.; Kolenda, R.; Jarzab, A.; Biernatowska, A.; Schierack, P.
Source: Self-asserted source
Rafal Kolenda via Scopus - Elsevier

A systematic review and meta-analysis of the epidemiology of pathogenic Escherichia coli of calves and the role of calves as reservoirs for human pathogenic E. coli.

Frontiers in Cellular and Infection Microbiology
2015 | Journal article
DOI: 10.3389/fcimb.2015.00023
EID:

2-s2.0-84965189860
Contributors: Kolenda, R.; Burdukiewicz, M.; Schierack, P.
Source: Self-asserted source
Rafal Kolenda via Scopus - Elsevier

First molecular characterization of Sarcocystis tenella in Tatra chamois (Rupicapra rupicapra tatrica) in Poland

Parasitology Research
2015 | Journal article
DOI: 10.1007/s00436-015-4619-4
EID:

2-s2.0-84941317939
Contributors: Kolenda, R.; Schierack, P.; Zieba, F.; Zwijacz-Kozica, T.; Bednarski, M.
Source: Self-asserted source
Rafal Kolenda via Scopus - Elsevier

Species-specific and pathotype-specific binding of bacteria to zymogen granule membrane glycoprotein 2 (GP2)

Gut
2015 | Journal article
DOI: 10.1136/gutjnl-2014-307854
EID:

2-s2.0-84922343369
Contributors: Schierack, P.; Rödiger, S.; Kolenda, R.; Hiemann, R.; Berger, E.; Grzymajło, K.; Swidsinski, A.; Juretzek, T.; Meissner, D.; Mydlak, K. et al.
Source: Self-asserted source
Rafal Kolenda via Scopus - Elsevier

Molecular characterization of Sarcocystis species from Polish roe deer based on ssu rRNA and cox1 sequence analysis

Parasitology Research
2014 | Journal article
DOI: 10.1007/s00436-014-3966-x
EID:

2-s2.0-84904973080
Contributors: Kolenda, R.; Ugorski, M.; Bednarski, M.
Source: Self-asserted source
Rafal Kolenda via Scopus - Elsevier

Role of F1C Fimbriae, Flagella, and secreted bacterial components in the inhibitory effect of probiotic Escherichia coli Nissle 1917 on atypical enteropathogenic E. coli infection

Infection and Immunity
2014 | Journal article
DOI: 10.1128/IAI.01431-13
EID:

2-s2.0-84898866891
Contributors: Kleta, S.; Nordhoff, M.; Tedin, K.; Wieler, L.H.; Kolenda, R.; Oswald, S.; Oelschlaeger, T.A.; Bleiß, W.; Schierack, P.
Source: Self-asserted source
Rafal Kolenda via Scopus - Elsevier

FimH adhesin from host unrestricted Salmonella Enteritidis binds to different glycoprotein ligands expressed by enterocytes from sheep, pig and cattle than FimH adhesins from host restricted Salmonella Abortus-ovis, Salmonella Choleraesuis and Salmonella Dublin

Veterinary Microbiology
2013 | Journal article
DOI: 10.1016/j.vetmic.2013.07.004
EID:

2-s2.0-84883303617
Contributors: Grzymajło, K.; Ugorski, M.; Kolenda, R.; Kedzierska, A.; Kuźmińska-Bajor, M.; Wieliczko, A.
Source: Self-asserted source
Rafal Kolenda via Scopus - Elsevier

Peer review (5 reviews for 4 publications/grants)

Review activity for BMC veterinary research (1)
Review activity for Microbial ecology. (1)
Review activity for PloS one. (2)
Review activity for Veterinary microbiology. (1)
How many people are using ORCID?