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Scopus Author ID: 7102744785

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Works (50 of 60)

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Page 1 of 2

Agent-based models of malaria transmission: a systematic review

Malaria Journal
2018 | Journal article
DOI: 10.1186/s12936-018-2442-y
Source: Self-asserted source
Jonathan Keith

Bayesian change-point modeling with segmented ARMA model

PLoS ONE
2018 | Journal article
DOI: 10.1371/journal.pone.0208927
Source: Self-asserted source
Jonathan Keith

Cross-Talk Categorisations in Data-Driven Models of Signalling Networks: A System-Level View

Gene Expression and Regulation in Mammalian Cells
2018 | Book chapter
DOI: 10.5772/intechopen.72408
Source: Self-asserted source
Jonathan Keith

Linking species richness and size diversity in birds and fishes

Ecography
2018 | Journal article
DOI: 10.1111/ecog.03582
Source: Self-asserted source
Jonathan Keith

Accurate phenotyping: Reconciling approaches through Bayesian model averaging

PLoS ONE
2017 | Journal article
DOI: 10.1371/journal.pone.0176136
Source: Self-asserted source
Jonathan Keith

Balancing generality and specificity in ecological gradient analysis with species abundance distributions and individual size distributions

Global Ecology and Biogeography
2017 | Journal article
DOI: 10.1111/geb.12537
Source: Self-asserted source
Jonathan Keith

Bayesian model of signal rewiring reveals mechanisms of gene dysregulation in acquired drug resistance in breast cancer

PLoS ONE
2017 | Journal article
DOI: 10.1371/journal.pone.0173331
Source: Self-asserted source
Jonathan Keith

Bayesian semi-individual based model with approximate Bayesian computation for parameters calibration: Modelling Crown-of-Thorns populations on the Great Barrier Reef

Ecological Modelling
2017 | Journal article
DOI: 10.1016/j.ecolmodel.2017.09.006
Source: Self-asserted source
Jonathan Keith

Bioinformatics
Source: Self-asserted source
Jonathan Keith

Bioinformatics
Source: Self-asserted source
Jonathan Keith

Genome-wide identification of conserved intronic non-coding sequences using a Bayesian segmentation approach

BMC Genomics
2017 | Journal article
DOI: 10.1186/s12864-017-3645-2
Source: Self-asserted source
Jonathan Keith

Sequence Segmentation with changeptGUI

Bioinformatics Volume I: Data, Sequence Analysis, and Evolution
2017 | Book chapter
DOI: 10.1007/978-1-4939-6622-6_12
Source: Self-asserted source
Jonathan Keith

How do different aspects of biodiversity change through time? A case study on an Australian bird community

Ecography
2016 | Journal article
DOI: 10.1111/ecog.02306
EID:

2-s2.0-84973390651
Contributors: Yen, J.D.L.; Thomson, J.R.; Keith, J.M.; Paganin, D.M.; Nally, R.M.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

The neighborhood MCMC sampler for learning Bayesian networks

Proceedings Volume 10011, First International Workshop on Pattern Recognition
2016 | Conference paper
DOI: 10.1117/12.2242708
Source: Self-asserted source
Jonathan Keith

Uniform Sampling of Directed and Undirected Graphs Conditional on Vertex Connectivity

Electronic Notes in Discrete Mathematics
2016 | Journal article
DOI: 10.1016/j.endm.2016.05.005
Source: Self-asserted source
Jonathan Keith

Agent-based Bayesian spread model applied to red imported fire ants in Brisbane

Biosecurity Surveillance: Quantitative Approaches
2015 | Book chapter
Source: Self-asserted source
Jonathan Keith

Discovery of putative small non-coding RNAs from the obligate intracellular bacterium Wolbachia pipientis

PLoS ONE
2015 | Journal article
DOI: 10.1371/journal.pone.0118595
EID:

2-s2.0-84928910962
Contributors: Woolfit, M.; Algama, M.; Keith, J.M.; McGraw, E.A.; Popovici, J.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Function regression in ecology and evolution: FREE

Methods in Ecology and Evolution
2015 | Journal article
DOI: 10.1111/2041-210X.12290
EID:

2-s2.0-84921460720
Contributors: Yen, J.D.L.; Thomson, J.R.; Paganin, D.M.; Keith, J.M.; Mac Nally, R.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Prediction of signaling cross-talks contributing to acquired drug resistance in breast cancer cells by Bayesian statistical modeling

BMC Systems Biology
2015 | Journal article
DOI: 10.1186/s12918-014-0135-x
EID:

2-s2.0-84927770082
Contributors: Azad, A.K.M.; Lawen, A.; Keith, J.M.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Sampling phylogenetic tree space with the generalized Gibbs sampler

Cladistics
2015 | Journal article
DOI: 10.1111/cla.12093
EID:

2-s2.0-84937028432
Contributors: Keith, J.M.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Drosophila 3′ UTRs are more complex than protein-coding sequences

PLoS ONE
2014 | Journal article
DOI: 10.1371/journal.pone.0097336
EID:

2-s2.0-84901273358
Contributors: Algama, M.; Oldmeadow, C.; Tasker, E.; Mengersen, K.; Keith, J.M.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Investigating genomic structure using changept: A Bayesian segmentation model

Computational and Structural Biotechnology Journal
2014 | Journal article
DOI: 10.1016/j.csbj.2014.08.003
EID:

2-s2.0-84928891982
Contributors: Algama, M.; Keith, J.M.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Agent-based Bayesian approach to monitoring the progress of invasive species eradication programs

Proceedings of the National Academy of Sciences of the United States of America
2013 | Journal article
DOI: 10.1073/pnas.1216146110
EID:

2-s2.0-84882439948
Contributors: Keith, J.M.; Spring, D.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Bayesian Approaches to the Design of Markov Chain Monte Carlo Samplers

Monte Carlo and Quasi-Monte Carlo Methods 2012
2013 | Conference paper
DOI: 10.1007/978-3-642-41095-6_22
Source: Self-asserted source
Jonathan Keith

A Bayesian method for comparing and combining binary classifiers in the absence of a gold standard

BMC Bioinformatics
2012 | Journal article
DOI: 10.1186/1471-2105-13-179
EID:

2-s2.0-84864262797
Contributors: Keith, J.M.; Davey, C.M.; Boyd, S.E.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

A Bayesian Regression Model with Variable Selection for Genome-Wide Association Studies

Case Studies in Bayesian Statistical Modelling and Analysis
2012 | Book
DOI: 10.1002/9781118394472.ch6
EID:

2-s2.0-84949750298
Contributors: Chen, C.; Mengersen, K.L.; Ickstadt, K.; Keith, J.M.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Computational characterization of 3′ splice variants in the GFAP isoform family

PLoS ONE
2012 | Journal article
DOI: 10.1371/journal.pone.0033565
EID:

2-s2.0-84859153470
Contributors: Boyd, S.E.; Nair, B.; Ng, S.W.; Keith, J.M.; Orian, J.M.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Estimating change-points in biological sequences via the cross-entropy method

Annals of Operations Research
2011 | Journal article
DOI: 10.1007/s10479-010-0687-0
EID:

2-s2.0-80052018747
Contributors: Evans, G.E.; Sofronov, G.Y.; Keith, J.M.; Kroese, D.P.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Methods for identifying SNP interactions: A review on variations of logic regression, Random Forest and bayesian logistic regression

IEEE/ACM Transactions on Computational Biology and Bioinformatics
2011 | Journal article
DOI: 10.1109/TCBB.2011.46
EID:

2-s2.0-80052880887
Contributors: Chen, C.C.M.; Schwender, H.; Keith, J.; Nunkesser, R.; Mengersen, K.; MacRossan, P.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Model selection in Bayesian segmentation of multiple DNA alignments

Bioinformatics
2011 | Journal article
DOI: 10.1093/bioinformatics/btq716
EID:

2-s2.0-79951963632
Contributors: Oldmeadow, C.; Keith, J.M.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Multiple evolutionary rate classes in animal genome evolution

Molecular Biology and Evolution
2010 | Journal article
DOI: 10.1093/molbev/msp299
EID:

2-s2.0-77952297078
Contributors: Oldmeadow, C.; Mengersen, K.; Mattick, J.S.; Keith, J.M.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Bayesian latent trait modeling of migraine symptom data

Human Genetics
2009 | Journal article
DOI: 10.1007/s00439-009-0671-4
EID:

2-s2.0-68949215134
Contributors: Chen, C.C.M.; Keith, J.M.; Nyholt, D.R.; Martin, N.G.; Mengersen, K.L.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Identifying Change-Points in Biological Sequences via Sequential Importance Sampling

Environmental Modeling and Assessment
2009 | Journal article
DOI: 10.1007/s10666-008-9160-8
EID:

2-s2.0-70349482165
Contributors: Sofronov, G.Y.; Evans, G.E.; Keith, J.M.; Kroese, D.P.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Linkage and heritability analysis of migraine symptom groupings: A comparison of three different clustering methods on twin data

Human Genetics
2009 | Journal article
DOI: 10.1007/s00439-009-0652-7
EID:

2-s2.0-67349207108
Contributors: Chen, C.C.M.; Mengersen, K.L.; Keith, J.M.; Martin, N.G.; Nyholt, D.R.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Adaptive independence samplers

Statistics and Computing
2008 | Journal article
DOI: 10.1007/s11222-008-9070-2
EID:

2-s2.0-57849116433
Contributors: Keith, J.M.; Kroese, D.P.; Sofronov, G.Y.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Bioinformatics. Preface.

Methods in molecular biology (Clifton, N.J.)
2008 | Journal article
EID:

2-s2.0-53449093936
Contributors: Keith, J.M.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Calculation of IBD probabilities with dense SNP or sequence data

Genetic Epidemiology
2008 | Journal article
DOI: 10.1002/gepi.20324
EID:

2-s2.0-51749109039
Contributors: Keith, J.M.; McRae, A.; Duffy, D.; Mengersen, K.; Visscher, P.M.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Data, sequence analysis and evolution. Preface.

Methods in molecular biology (Clifton, N.J.)
2008 | Journal article
EID:

2-s2.0-46449139284
Contributors: Keith, J.M.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Delineating slowly and rapidly evolving fractions of the Drosophila genome

Journal of Computational Biology
2008 | Journal article
DOI: 10.1089/cmb.2007.0173
EID:

2-s2.0-43449095726
Contributors: Keith, J.M.; Adams, P.; Stephen, S.; Mattick, J.S.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Methods in Molecular Biology: Preface

Methods in Molecular Biology
2008 | Book
EID:

2-s2.0-62549124606
Contributors: Keith, J.M.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Sequence segmentation

Methods in Molecular Biology
2008 | Book
DOI: 10.1007/978-1-60327-159-2_11
EID:

2-s2.0-84934442161
Contributors: Keith, J.M.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Sequence segmentation.

Methods in molecular biology (Clifton, N.J.)
2008 | Journal article
EID:

2-s2.0-46449094648
Contributors: Keith, J.M.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

The generalized gibbs sampler and the neighborhood sampler

Monte Carlo and Quasi-Monte Carlo Methods 2006
2008 | Conference paper
EID:

2-s2.0-84886028518
Contributors: Keith, J.; Sofronov, G.; Kroese, D.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Bayesian inference in estimation of distribution algorithms

2007 IEEE Congress on Evolutionary Computation, CEC 2007
2007 | Conference paper
DOI: 10.1109/CEC.2007.4424463
EID:

2-s2.0-77952750332
Contributors: Gallagher, M.; Wood, I.; Keith, J.; Sofronov, G.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Chapter 10 Sequencing Aided by Mutagenesis Facilitates the De Novo Sequencing of Megabase DNA Fragments by Short Read Lengths

Perspectives in Bioanalysis
2007 | Book
DOI: 10.1016/S1871-0069(06)02010-6
EID:

2-s2.0-44449083866
Contributors: Keith, J.M.; Hawkes, D.B.; Carter, J.C.; Cochran, D.A.E.; Adams, P.; Bryant, D.E.; Mitchelson, K.R.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Identifying change-points in biological sequences via sequential importance sampling

MODSIM07 - Land, Water and Environmental Management: Integrated Systems for Sustainability, Proceedings
2007 | Conference paper
EID:

2-s2.0-80052928342
Contributors: Sofronov, G.Yu.; Evans, G.E.; Keith, J.M.; Kroese, D.P.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Parallel Cross-Entropy optimization

Proceedings - Winter Simulation Conference
2007 | Conference paper
DOI: 10.1109/WSC.2007.4419854
EID:

2-s2.0-49749101636
Contributors: Evans, G.E.; Keith, J.M.; Kroese, D.P.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

An optimal sequential procedure for a buying-selling problem with independent observations

Journal of Applied Probability
2006 | Journal article
DOI: 10.1239/jap/1152413734
EID:

2-s2.0-33845305473
Contributors: Sofronov, G.; Keith, J.M.; Kroese, D.P.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Searching for convergence in phylogenetic Markov chain Monte Carlo

Systematic Biology
2006 | Journal article
DOI: 10.1080/10635150600812544
EID:

2-s2.0-33846141299
Contributors: Beiko, R.G.; Keith, J.M.; Harlow, T.J.; Ragan, M.A.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier

Segmenting eukaryotic genomes with the generalized Gibbs sampler

Journal of Computational Biology
2006 | Journal article
DOI: 10.1089/cmb.2006.13.1369
EID:

2-s2.0-33846221985
Contributors: Keith, J.M.
Source: Self-asserted source
Jonathan Keith via Scopus - Elsevier
Items per page:
Page 1 of 2

Peer review (5 reviews for 5 publications/grants)

Review activity for Artificial intelligence review. (1)
Review activity for Journal of mathematical biology. (1)
Review activity for Nature communications (1)
Review activity for PloS one. (1)
Review activity for Statistical papers. (1)
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