Personal information

Emails & domains

Verified email domains

Keywords

RNA structure, Bioinformatics, Visualization, NGS analysis, Plant metagenomics

Countries

Germany

Activities

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Employment (9)

European Molecular Biology Laboratory: Heidelberg, DE

2023-07 to present | Senior Bioinformatics Software Engineer
Employment
Source: Self-asserted source
Christian Schudoma

European Molecular Biology Laboratory: Heidelberg, Baden-Württemberg, DE

2020-07 to present | Bioinformatics Cloud and Workflow Engineer (Structural and Computational Biology)
Employment
Source: Self-asserted source
Christian Schudoma

Earlham Institute: Norwich, GB

2018-08-01 to 2020-07 | Senior Bioinformatics Software Developer (Core Bioinformatics)
Employment
Source: Self-asserted source
Christian Schudoma

Earlham Institute: Norwich, GB

2017-11-01 to 2018-07-31 | Bioinformatician/Computational Biologist (Core Bioinformatics)
Employment
Source: Self-asserted source
Christian Schudoma

The Genome Analysis Centre (TGAC) / Earlham Institute: Norwich, Norfolk, GB

2016-01 to 2017-10-31 | Computational Biologist/Bioinformatician/SCR Officer (Organisms and Ecosystems / Triticeae Genomics)
Employment
Source: Self-asserted source
Christian Schudoma

The Sainsbury Laboratory, Bioinformatics Group: Norwich, Norfolk, GB

2014-11 to 2015-12 | Bioinformatics Support Officer
Employment
Source: Self-asserted source
Christian Schudoma

Max Planck Institute of Molecular Plant Physiology, Bioinformatics Group: Potsdam-Golm, DE

2011-05 to 2014-10 | Postdoctoral Researcher (Bioinformatics)
Employment
Source: Self-asserted source
Christian Schudoma

Max Planck Institute of Molecular Plant Physiology, Bioinformatics Group: Potsdam-Golm, DE

2008-02 to 2011-04 | Ph.D. student (Bioinformatics)
Employment
Source: Self-asserted source
Christian Schudoma

Zuse Institute Berlin, Visualization and Data Analysis/Computer Science Research: Berlin, DE

2003 to 2007 | Student Worker
Employment
Source: Self-asserted source
Christian Schudoma

Education and qualifications (3)

University of Potsdam, Bioinformatics: Potsdam, DE

2009 to 2011 | Ph.D./Dr.rer.nat. (Bioinformatics)
Education
Source: Self-asserted source
Christian Schudoma

Freie Universitat Berlin, Bioinformatics: Berlin, DE

2004 to 2006 | M.Sc. (Bioinformatics)
Education
Source: Self-asserted source
Christian Schudoma

Freie Universitat Berlin, Bioinformatics: Berlin, DE

2001 to 2004 | B.Sc. (Bioinformatics)
Education
Source: Self-asserted source
Christian Schudoma

Works (15)

Changes in gene expression align with behavioural differences in reproductive choices in a social beetle

Insectes Sociaux
2025-02 | Journal article
DOI: 10.1007/s00040-024-01016-8
Contributors: P. Regon; C. Schudoma; A. Moncaz; A. Harari; A. Kliot
Source: check_circle
Crossref

Biosynthesis and Bioactivity of Anti-Inflammatory Triterpenoids inCalendula officinalis(pot marigold)

2025-01-14 | Preprint
DOI: 10.1101/2025.01.11.632544
Contributors: D Golubova; M Salmon; H Su; C Tansley; GG Kaithakottil; G Linsmith; S Schudoma; D Swarbreck; MA O’Connell; NJ Patron
Source: check_circle
Crossref

Refined Enterotyping Reveals Dysbiosis in Global Fecal Metagenomes

2024-08-13 | Preprint
DOI: 10.1101/2024.08.13.607711
Contributors: Marisa Isabell Keller; Suguru Nishijima; Daniel Podlesny; Chan Yeong Kim; Shahriyar Mahdi Robbani; Christian Schudoma; Anthony Fullam; Jonas Richter; Ivica Letunic; Wasiu Akanni et al.
Source: check_circle
Crossref

Machine learning-based meta-analysis reveals gut microbiome alterations associated with Parkinson’s disease

2023-12-06 | Preprint
DOI: 10.1101/2023.12.05.569565
Contributors: Stefano Romano; Jakob Wirbel; Rebecca Ansorge; Christian Schudoma; Quinten Raymond Ducarmon; Arjan Narbad; Georg Zeller
Source: check_circle
Crossref

C. difficile may be overdiagnosed in adults and is a prevalent commensal in infants

2023-09-12 | Preprint
DOI: 10.7554/eLife.90111
Contributors: Pamela Ferretti; Jakob Wirbel; Oleksandr M Maistrenko; Thea Van Rossum; Renato Alves; Anthony Fullam; Wasiu Akanni; Christian Schudoma; Anna Schwarz; Roman Thielemann et al.
Source: check_circle
Crossref

C. difficile may be overdiagnosed in adults and is a prevalent commensal in infants

2023-09-12 | Preprint
DOI: 10.7554/eLife.90111.1
Contributors: Pamela Ferretti; Jakob Wirbel; Oleksandr M Maistrenko; Thea Van Rossum; Renato Alves; Anthony Fullam; Wasiu Akanni; Christian Schudoma; Anna Schwarz; Roman Thielemann et al.
Source: check_circle
Crossref

Conserved secreted effectors contribute to endophytic growth and multihost plant compatibility in a vascular wilt fungus

The Plant Cell
2022-08-25 | Journal article
DOI: 10.1093/plcell/koac174
Contributors: Amey Redkar; Mugdha Sabale; Christian Schudoma; Bernd Zechmann; Yogesh K Gupta; Manuel S López-Berges; Giovanni Venturini; Selena Gimenez-Ibanez; David Turrà; Roberto Solano et al.
Source: check_circle
Crossref

C. difficilemay be overdiagnosed in adults and is a prevalent commensal in infants

2022-02-18 | Preprint
DOI: 10.1101/2022.02.16.480740
Contributors: Pamela Ferretti; Jakob Wirbel; Oleksandr M Maistrenko; Thea Van Rossum; Renato Alves; Anthony Fullam; Wasiu Akanni; Christian Schudoma; Anna Schwarz; Roman Thielemann et al.
Source: check_circle
Crossref

Conserved secreted effectors determine endophytic growth and multi-host plant compatibility in a vascular wilt fungus

2021-08-29 | Other
DOI: 10.1101/2021.08.29.457830
Contributors: Amey Redkar; Mugdha Sabale; Christian Schudoma; Bernd Zechmann; Yogesh K. Gupta; Manuel S. López-Berges; Giovanni Venturini; Selena Gimenez-Ibanez; David Turrà; Roberto Solano et al.
Source: check_circle
Crossref

An improved assembly of theAlbugo candidaAc2V genome reveals the expansion of the “CCG” class of effectors

2021-03-29 | Preprint
DOI: 10.1101/2021.03.29.437041
Contributors: Oliver J. Furzer; Volkan Cevik; Sebastian Fairhead; Kate Bailey; Amey Redkar; Christian Schudoma; Dan MacLean; Eric B. Holub; Jonathan D.G. Jones
Source: check_circle
Crossref

Convergent Loss of an EDS1/PAD4 Signaling Pathway in Several Plant Lineages Reveals Coevolved Components of Plant Immunity and Drought Response

The Plant Cell
2020-07-06 | Journal article
DOI: 10.1105/tpc.19.00903
Contributors: Erin L. Baggs; J. Grey Monroe; Anil S. Thanki; Ruby O’Grady; Christian Schudoma; Wilfried Haerty; Ksenia V. Krasileva
Source: check_circle
Crossref

Comparison of efficiency and specificity of CRISPR-associated (Cas) nucleases in plants: An expanded toolkit for precision genome engineering

PLOS ONE
2019-02-27 | Journal article
DOI: 10.1371/journal.pone.0211598
Contributors: Oleg Raitskin; Muthamilarasan Mehanathan; Christian Schudoma; Anthony West; Nicola J. Patron
Source: check_circle
Crossref

Comparison of Efficiency and Specificity of CRISPR-Associated (Cas) Nucleases in Plants: An Expanded Toolkit for Precision Genome Engineering

2018-09-21 | Other
DOI: 10.1101/422766
Contributors: Oleg Raitskin; Christian Schudoma; Anthony West; Nicola J. Patron
Source: check_circle
Crossref

An improved assembly and annotation of the allohexaploid wheat genome identifies complete families of agronomic genes and provides genomic evidence for chromosomal translocations

Genome Research
2017-05-18 | Journal article
DOI: 10.1101/gr.217117.116
Contributors: Bernardo J. Clavijo; Luca Venturini; Christian Schudoma; Gonzalo Garcia Accinelli; Gemy Kaithakottil; Jonathan Wright; Philippa Borrill; George Kettleborough; Darren Heavens; Helen Chapman et al.
Source: check_circle
Crossref

Plant immune and growth receptors share common signalling components but localise to distinct plasma membrane nanodomains

eLife
2017-03-06 | Journal article
DOI: 10.7554/eLife.25114
Contributors: Christoph A Bücherl; Iris K Jarsch; Christian Schudoma; Cécile Segonzac; Malick Mbengue; Silke Robatzek; Daniel MacLean; Thomas Ott; Cyril Zipfel
Source: check_circle
Crossref
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