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neuroscience, artificial intelligence, geometric deep learning, large language models, multimodal AI, Alzheimer's disease
United States

Activities

Employment (3)

Wyss Institute for Biologically Inspired Engineering: Boston, US

2022-09 to present | Student Researcher in George Church Lab
Employment
Source: Self-asserted source
Ayush Noori

Harvard Medical School: Boston, US

2021-02 to present | Student Researcher in Marinka Zitnik Lab (Department of Biomedical Informatics)
Employment
Source: Self-asserted source
Ayush Noori

Massachusetts General Hospital: Charlestown, MA, US

2018-03 to present | Student Researcher (Department of Neurology)
Employment
Source: Self-asserted source
Ayush Noori

Education and qualifications (2)

Harvard John A. Paulson School of Engineering and Applied Sciences: Allston, MA, US

2023-09 to 2025-05 | Master's in Computer Science
Education
Source: Self-asserted source
Ayush Noori

Harvard College: Cambridge, MA, US

2021-09 to 2025-05 | A.B. in Computer Science and Neuroscience
Education
Source: Self-asserted source
Ayush Noori

Works (19)

Astrocyte transcriptomic changes along the spatiotemporal progression of Alzheimer’s disease

Nature Neuroscience
2024-12 | Journal article
Contributors: Alberto Serrano-Pozo; Huan Li; Zhaozhi Li; Clara Muñoz-Castro; Methasit Jaisa-aad; Molly A. Healey; Lindsay A. Welikovitch; Rojashree Jayakumar; Annie G. Bryant; Ayush Noori et al.
Source: check_circle
Crossref

Scoping review of knowledge graph applications in biomedical and healthcare sciences

2023-12-14 | Preprint
Contributors: Sanjay Budhdeo; Joe Zhang; Yusuf Abdulle; Paul M Agapow; Douglas GJ McKechnie; Matt Archer; Viraj Shah; Eugenia Forte; Ayush Noori; Marinka Zitnik et al.
Source: check_circle
Crossref

Metapaths: similarity search in heterogeneous knowledge graphs via meta-paths

Bioinformatics
2023-05-04 | Journal article
Contributors: Ayush Noori; Michelle M Li; Amelia L M Tan; Marinka Zitnik; Zhiyong Lu
Source: check_circle
Crossref

Astrocyte transcriptomic changes along the spatiotemporal progression of Alzheimer’s disease

2022-12-21 | Preprint
Contributors: Alberto Serrano-Pozo; Zhaozhi Li; Maya Woodbury; Clara Muñoz-Castro; Astrid Watcher; Rojashree Jayakumar; Annie Bryant; Ayush Noori; Lindsay Welikovitch; Miwei Hu et al.
Source: check_circle
Crossref

Few shot learning for phenotype-driven diagnosis of patients with rare genetic diseases

2022-12-13 | Preprint
Contributors: Emily Alsentzer; Michelle M. Li; Shilpa N. Kobren; Ayush Noori; Isaac S. Kohane; Marinka Zitnik
Source: check_circle
Crossref

Development and Evaluation of a Natural Language Processing Annotation Tool to Facilitate Phenotyping of Cognitive Status in Electronic Health Records: Diagnostic Study

Journal of Medical Internet Research
2022-08-30 | Journal article
Contributors: Ayush Noori; Colin Magdamo; Xiao Liu; Tanish Tyagi; Zhaozhi Li; Akhil Kondepudi; Haitham Alabsi; Emily Rudmann; Douglas Wilcox; Laura Brenner et al.
Source: check_circle
Crossref

Systematic review of human post‐mortem immunohistochemical studies and bioinformatics analyses unveil the complexity of astrocyte reaction in Alzheimer's disease

Neuropathology and Applied Neurobiology
2022-02 | Journal article
Contributors: Lucía Viejo; Ayush Noori; Emily Merrill; Sudeshna Das; Bradley T. Hyman; Alberto Serrano‐Pozo
Source: check_circle
Crossref

Cyclic multiplex fluorescent immunohistochemistry and machine learning reveal distinct states of astrocytes and microglia in normal aging and Alzheimer’s disease

Journal of Neuroinflammation
2022-02-02 | Journal article
Part of ISSN: 1742-2094
Source: Self-asserted source
Ayush Noori

Active deep learning to detect cognitive concerns in electronic health records

Alzheimer's & Dementia
2021-12 | Journal article
Part of ISSN: 1552-5260
Part of ISSN: 1552-5279
Source: Self-asserted source
Ayush Noori

Effect of APOE alleles on the glial transcriptome in normal aging and Alzheimer’s disease

Nature Aging
2021-10-11 | Journal article
Contributors: Alberto Serrano-Pozo; Zhaozhi Li; Ayush Noori; Huong N. Nguyen; Aziz Mezlini; Liang Li; Eloise Hudry; Rosemary J. Jackson; Bradley T. Hyman; Sudeshna Das
Source: check_circle
Crossref

Differential gene expression data from the human central nervous system across Alzheimer's disease, Lewy body diseases, and the amyotrophic lateral sclerosis and frontotemporal dementia spectrum

Data in Brief
2021-04 | Journal article
Part of ISSN: 2352-3409
Source: Self-asserted source
Ayush Noori

Systematic review and meta-analysis of human transcriptomics reveals neuroinflammation, deficient energy metabolism, and proteostasis failure across neurodegeneration

Neurobiology of Disease
2021-02 | Journal article
Part of ISSN: 0969-9961
Source: Self-asserted source
Ayush Noori

Meta‐analysis of mouse transcriptomic studies supports a context‐dependent astrocyte reaction in acute CNS injury versus neurodegeneration

Alzheimer's & Dementia
2020-12-07 | Conference abstract
Part of ISSN: 1552-5260
Part of ISSN: 1552-5279
Source: Self-asserted source
Ayush Noori

Natural Language Processing to Detect Cognitive Concerns in Electronic Health Records Using Deep Learning

2020-11-12 | Preprint
Source: Self-asserted source
Ayush Noori

Meta-analysis of mouse transcriptomic studies supports a context-dependent astrocyte reaction in acute CNS injury versus neurodegeneration.

Journal of Neuroinflammation
2020-07-31 | Journal article
Source: Self-asserted source
Ayush Noori

Composition of Caenorhabditis elegans extracellular vesicles suggests roles in metabolism, immunity, and aging.

GeroScience
2020-06-24 | Journal article
Source: Self-asserted source
Ayush Noori

An Interscholastic Network To Generate LexA Enhancer Trap Lines in Drosophila.

G3 (Bethesda, Md.)
2019-07-09 | Journal article
Source: Self-asserted source
Ayush Noori

An Interscholastic Network to Generate LexA Enhancer Trap Lines in Drosophila

bioRxiv
2019-02-16 | Preprint
Source: Self-asserted source
Ayush Noori

Isolation and characterization of extracellular vesicles from Caenorhabditis elegans for multi-omic analysis

bioRxiv
2018-11-23 | Preprint
Source: Self-asserted source
Ayush Noori

Peer review (1 review for 1 publication/grant)

Review activity for PLOS digital health. (1)