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Employment (1)

University of Basel: Basel, Basel-Stadt, CH

2017-10-01 to present | PhD student (Biozentrum)
Employment
Source: Self-asserted source
Maria Katsantoni

Education and qualifications (2)

University of Basel: Basel, Basel-Stadt, CH

2014-09-01 to 2016-12-16 | MSc in Molecular Biology (Biozentrum)
Education
Source: Self-asserted source
Maria Katsantoni

National and Kapodistrian University of Athens: Athens, GR

2007-09-01 to 2013-11-01 | BSc in Biology (Biology)
Education
Source: Self-asserted source
Maria Katsantoni

Works (6)

ZARP: A user-friendly and versatile RNA-seq analysis workflow [version 1; peer review: awaiting peer review]

2024-05-24 | Journal article
DOI: 10.12688/f1000research.149237.1
Part of ISSN: 2046-1402
Funded by GRANT_NUMBER: 182880
Funded by GRANT_NUMBER: 189063
Contributors: Maria Katsantoni; Foivos Gypas; Christina J Herrmann; Dominik Burri; Maciej Bąk; Paula Iborra; Krish Agarwal; Meriç Ataman; Máté Balajti; Noè Pozzan et al.
Source: check_circle
F1000
grade
Preferred source (of 2)‎

Improved analysis of (e)CLIP data with RCRUNCH yields a compendium of RNA-binding protein binding sites and motifs

2022-07-06 | Preprint
DOI: 10.1101/2022.07.06.498949
Contributors: Maria Katsantoni; Erik van Nimwegen; Mihaela Zavolan
Source: check_circle
Crossref

Structure of SRSF1 RRM1 bound to RNA reveals an unexpected bimodal mode of interaction and explains its involvement in SMN1 exon7 splicing

Nature Communications
2021-12 | Journal article
DOI: 10.1038/s41467-020-20481-w
Part of ISSN: 2041-1723
Source: Self-asserted source
Maria Katsantoni

ZARP: An automated workflow for processing of RNA-seq data

2021-11-19 | Other
DOI: 10.1101/2021.11.18.469017
Contributors: Maria Katsantoni; Foivos Gypas; Christina J. Herrmann; Dominik Burri; Maciej Bak; Paula Iborra; Krish Agarwal; Meric Ataman; Anastasiya Börsch; Mihaela Zavolan et al.
Source: check_circle
Crossref

CLIP and complementary methods

Nature Reviews Methods Primers
2021-03-04 | Journal article
DOI: 10.1038/s43586-021-00018-1
Contributors: Markus Hafner; Maria Katsantoni; Tino Köster; James Marks; Joyita Mukherjee; Dorothee Staiger; Jernej Ule; Mihaela Zavolan
Source: check_circle
Crossref

ZARP: Automated processing of RNA-seq data

2020-06-26 | Software
DOI: 10.5281/ZENODO.3891135
Source: Self-asserted source
Maria Katsantoni
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