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Employment (2)

University of California Davis: Davis, CA, US

2015-09-01 to present | Assistant Professor (MIND Institute, Genome Center and Biochemistry and Molecular Medicine)
Employment
Source: Self-asserted source
Fereydoun Hormozdiari

University of Washington: Seattle, WA, US

2011-10-01 to 2015-08-01 | PostDoc (Genome Sciences)
Employment
Source: Self-asserted source
Fereydoun Hormozdiari

Education and qualifications (3)

Simon Fraser University: Burnaby, BC, CA

2008-01-01 to 2011-09-01 | PhD (Computing Sciences)
Education
Source: Self-asserted source
Fereydoun Hormozdiari

Simon Fraser University: Burnaby, BC, CA

2004-09-01 to 2007-12-01 | MSc (Computing Science)
Education
Source: Self-asserted source
Fereydoun Hormozdiari

Sharif University of Technology: Tehran, IR

1999-09-01 to 2004-06-01 | BSc (Computer Engineering)
Education
Source: Self-asserted source
Fereydoun Hormozdiari

Works (50 of 51)

Items per page:
Page 1 of 2

Toolkit for automated and rapid discovery of structural variants

Methods
2017 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

A global reference for human genetic variation

Nature
2015 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Resolving the complexity of the human genome using single-molecule sequencing

Nature
2015 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

The discovery of integrated gene networks for autism and related disorders

Genome research
2015 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Genome-wide association study for age-related hearing loss (AHL) in the mouse: a meta-analysis

Journal of the Association for Research in Otolaryngology
2014 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Improved imputation quality of low-frequency and rare variants in European samples using the ‘Genome of The Netherlands’

European Journal of Human Genetics
2014 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Whole-genome sequencing of individuals from a founder population identifies candidate genes for asthma

PLoS One
2014 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Great ape genetic diversity and population history

Nature
2013 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Rates and patterns of great ape retrotransposition

Proceedings of the National Academy of Sciences
2013 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

The genome sequencing of an albino Western lowland gorilla reveals inbreeding in the wild

BMC genomics
2013 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

An integrated map of genetic variation from 1,092 human genomes

Nature
2012 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

From sequence to molecular pathology, and a mechanism driving the neuroendocrine phenotype in prostate cancer

The Journal of pathology
2012 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Integrated genome and transcriptome sequencing identifies a novel form of hybrid and aggressive prostate cancer

The Journal of pathology
2012 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Proteome Network Emulating Models

Functional Coherence of Molecular Networks in Bioinformatics
2012 | Book chapter
Source: Self-asserted source
Fereydoun Hormozdiari

Alu repeat discovery and characterization within human genomes

Genome research
2011 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Comrad: a novel algorithmic framework for the integrated analysis of RNA-Seq and WGSS data

Bioinformatics
2011 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Comrad: detection of expressed rearrangements by integrated analysis of RNA-Seq and low coverage genome sequence data

Bioinformatics
2011 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

deFuse: an algorithm for gene fusion discovery in tumor RNA-Seq data

PLoS computational biology
2011 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Demographic history and rare allele sharing among human populations

Proceedings of the National Academy of Sciences
2011 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Gorilla genome structural variation reveals evolutionary parallelisms with chimpanzee

Genome research
2011 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Mapping copy number variation by population-scale genome sequencing

Nature
2011 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Pacific symposium on biocomputing 2011

Unknown Journal
2011 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Simultaneous structural variation discovery among multiple paired-end sequenced genomes

Genome research
2011 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Structural variation discovery: the easy, the hard and the ugly

2011 | Dissertation or Thesis
Source: Self-asserted source
Fereydoun Hormozdiari

A map of human genome variation from population-scale sequencing

Nature
2010 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Detection and characterization of novel sequence insertions using paired-end next-generation sequencing

Bioinformatics
2010 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Invited Lectures

Acta Biochim Biophys Sin
2010 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

mrsFAST: a cache-oblivious algorithm for short-read mapping

Nature methods
2010 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Next-generation VariationHunter: combinatorial algorithms for transposon insertion discovery

Bioinformatics
2010 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Protein-protein interaction network evaluation for identifying potential drug targets

Journal of Computational Biology
2010 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Towards improved assessment of functional similarity in large-scale screens: a study on indel length

Journal of Computational Biology
2010 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Combinatorial algorithms for structural variation detection in high-throughput sequenced genomes

Genome research
2009 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Dense graphlet statistics of protein interaction and random networks

Biocomputing 2009
2009 | Book chapter
Source: Self-asserted source
Fereydoun Hormozdiari

MoDIL: detecting small indels from clone-end sequencing with mixtures of distributions

Nature methods
2009 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Personalized copy number and segmental duplication maps using next-generation sequencing

Nature genetics
2009 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Quantifying systemic evolutionary changes by color coding confidence-scored ppi networks

International Workshop on Algorithms in Bioinformatics
2009 | Conference paper
Source: Self-asserted source
Fereydoun Hormozdiari

The effect of insertions and deletions on wirings in protein-protein interaction networks: a large-scale study

Journal of Computational Biology
2009 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Biomolecular network motif counting and discovery by color coding

Bioinformatics
2008 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Optimal pooling for genome re-sequencing with ultra-high-throughput short-read technologies

Bioinformatics
2008 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

The relation between indel length and functional divergence: a formal study

International Workshop on Algorithms in Bioinformatics
2008 | Conference paper
Source: Self-asserted source
Fereydoun Hormozdiari

Not all scale free networks are born equal: the role of the seed graph in ppi network emulation

Systems Biology and Computational Proteomics
2007 | Book chapter
Source: Self-asserted source
Fereydoun Hormozdiari

Not all scale-free networks are born equal: the role of the seed graph in PPI network evolution

PLoS computational biology
2007 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Relationship between insertion/deletion (indel) frequency of proteins and essentiality

BMC bioinformatics
2007 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Relationship between Insertion/Deletion (Indel) Frequency of Proteins and Essentiality

2007 | Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Protein protein interaction network comparison and emulation

2006 | Dissertation or Thesis
Source: Self-asserted source
Fereydoun Hormozdiari

A Semi-supervised Approach for Data Stream Mining with Application to Intrusion Detection

Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Application Layer Video Multicasting

Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Extending NICE protocol

Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

Not All Scale Free Networks are Born Equal

Journal article
Source: Self-asserted source
Fereydoun Hormozdiari

PSB 2011 Tutorial: Personal Genomics

Journal article
Source: Self-asserted source
Fereydoun Hormozdiari
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