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Other IDs

Scopus Author ID: 55324583700
ResearcherID: GOV-5499-2022

Keywords

RNA Bioinformatics, Structural Bioinformatics

Countries

Malaysia, United States, United Kingdom

Activities

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Employment (1)

European Bioinformatics Institute: Cambridge, GB

2022-01 to present | Bioinformatician (Protein Data Bank in Europe)
Employment
Source: Self-asserted source
Sri Devan Appasamy

Education and qualifications (3)

Bowling Green State University: Bowling Green, OH, US

2024 | PhD in Biology (Department of Biological Sciences)
Education
Source: Self-asserted source
Sri Devan Appasamy

Universiti Kebangsaan Malaysia: Bangi, Selangor, MY

2013 | Msc in Molecular Biology (School of Biosciences and Biotechnology)
Education
Source: Self-asserted source
Sri Devan Appasamy

Universiti Kebangsaan Malaysia: Bangi, Selangor, MY

2009 | Bsc in Bioinformatics (School of Biosciences and Biotechnology)
Education
Source: Self-asserted source
Sri Devan Appasamy

Professional activities (1)

International Society for Computational Biology: Bethesda, US

Professional (Protein Data Bank in Europe)
Membership
Source: Self-asserted source
Sri Devan Appasamy

Works (9)

R3DMCS: a web server for visualizing structural variation in RNA motifs across experimental 3D structures from the same organism or across species.

Bioinformatics (Oxford, England)
2024-11 | Journal article
DOI: 10.1093/bioinformatics/btae682
PMID: 39546379
Contributors: Appasamy SD; Zirbel CL
Source: Self-asserted source
Sri Devan Appasamy via Europe PubMed Central

R2DT: a comprehensive platform for visualising RNA secondary structure

2024-09 | Preprint
DOI: 10.1101/2024.09.29.611006
PPR: PPR918460
Contributors: McCann H; Meade CD; Williams LD; Petrov AS; Johnson PZ; Simon AE; Hoksza D; Nawrocki EP; Chan PP; Lowe TM et al.
Source: Self-asserted source
Sri Devan Appasamy via Europe PubMed Central
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Annotating Macromolecular Complexes in the Protein Data Bank: Improving the FAIRness of Structure Data

Scientific Data
2023-12-01 | Journal article
DOI: 10.1038/s41597-023-02778-9
Contributors: Sri Devan Appasamy; John Berrisford; Romana Gaborova; Sreenath Nair; Stephen Anyango; Sergei Grudinin; Mandar Deshpande; David Armstrong; Ivanna Pidruchna; Joseph I. J. Ellaway et al.
Source: check_circle
Crossref
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Annotating Macromolecular Complexes in the Protein Data Bank: Improving the FAIRness of Structure Data

2023-05-15 | Preprint
DOI: 10.1101/2023.05.15.540692
Contributors: Sri Devan Appasamy; John Berrisford; Romana Gaborova; Sreenath Nair; Stephen Anyango; Sergei Grudinin; Mandar Deshpande; David Armstrong; Ivanna Pidruchna; Joseph I. J. Ellaway et al.
Source: check_circle
Crossref
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PDBe and PDBe-KB: Providing high-quality, up-to-date and integrated resources of macromolecular structures to support basic and applied research and education

Protein Science
2022 | Journal article
DOI: 10.1002/PRO.4439
WOSUID: WOS:000860758200001
Contributors: Varadi, Mihaly; Anyango, Stephen; Appasamy, Sri Devan; Armstrong, David; Bage, Marcus; Berrisford, John; Choudhary, Preeti; Bertoni, Damian; Deshpande, Mandar; Leines, Grisell Diaz et al.
Source: check_circle
Web of Science Researcher Profile Sync

Regulation of Glycine Cleavage and Detoxification by a Highly Conserved Glycine Riboswitch in Burkholderia spp.

Current Microbiology
2021-08 | Journal article
DOI: 10.1007/s00284-021-02550-5
Part of ISSN: 0343-8651
Part of ISSN: 1432-0991
Source: Self-asserted source
Sri Devan Appasamy
grade
Preferred source (of 2)‎

InterRNA: a database of base interactions in RNA structures

Nucleic Acids Res
2015-11-08 | Journal article
DOI: 10.1093/nar/gkv1186
Contributors: Sri Devan Appasamy; Hazrina Yusof Hamdani; Effirul Ikhwan Ramlan; Mohd Firdaus-Raih
Source: Self-asserted source
Sri Devan Appasamy via Crossref Metadata Search

Comparative Sequence and Structure Analysis Reveals the Conservation and Diversity of Nucleotide Positions and Their Associated Tertiary Interactions in the Riboswitches

PLoS ONE
2013 | Journal article
DOI: 10.1371/journal.pone.0073984
EID:

2-s2.0-84883529362
Contributors: Appasamy, S.D.; Ramlan, E.I.; Firdaus-Raih, M.
Source: Self-asserted source
Sri Devan Appasamy via Scopus - Elsevier

NASSAM: A server to search for and annotate tertiary interactions and motifs in three-dimensional structures of complex RNA molecules

Nucleic Acids Research
2012 | Journal article
DOI: 10.1093/nar/gks513
EID:

2-s2.0-84864451579
Contributors: Hamdani, H.Y.; Appasamy, S.D.; Willett, P.; Artymiuk, P.J.; Firdaus-Raih, M.
Source: Self-asserted source
Sri Devan Appasamy via Scopus - Elsevier
grade
Preferred source (of 2)‎

Peer review (1 review for 1 publication/grant)

Review activity for RNA biology. (1)
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