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Employment (1)

Alibaba Group (China): Beijing, CN

2021-12-31 to present (DAMO Academy)
Employment
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Jiawen Yao

Education and qualifications (1)

The University of Texas at Arlington: Arlington, TX, US

2014-08-05 to 2019-08-01 | PhD (Computer Science and Engineering)
Education
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Jiawen Yao

Works (50 of 75)

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A Colorectal Coordinate-Driven Method for Colorectum and Colorectal Cancer Segmentation in Conventional CT Scans

IEEE Transactions on Neural Networks and Learning Systems
2024 | Journal article
Contributors: Lisha Yao; Yingda Xia; Zhihong Chen; Suyun Li; Jiawen Yao; Dakai Jin; Yanting Liang; Jiatai Lin; Bingchao Zhao; Chu Han et al.
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A deep local attention network for pre-operative lymph node metastasis prediction in pancreatic cancer via multiphase CT imaging

arXiv
2023 | Other
EID:

2-s2.0-85146378177

Part of ISSN: 23318422
Contributors: Zheng, Z.; Fang, X.; Yao, J.; Zhu, M.; Lu, L.; Huang, L.; Xiao, J.; Shi, Y.; Lu, H.; Lu, J. et al.
Source: Self-asserted source
Jiawen Yao via Scopus - Elsevier

Artificial Intelligence to Predict Lymph Node Metastasis at CT in Pancreatic Ductal Adenocarcinoma

Radiology
2023 | Journal article
EID:

2-s2.0-85144589685

Part of ISSN: 15271315 00338419
Contributors: Bian, Y.; Zheng, Z.; Fang, X.; Jiang, H.; Zhu, M.; Yu, J.; Zhao, H.; Zhang, L.; Yao, J.; Lu, L. et al.
Source: Self-asserted source
Jiawen Yao via Scopus - Elsevier

Cluster-Induced Mask Transformers for Effective Opportunistic Gastric Cancer Screening on Non-contrast CT Scans

arXiv
2023 | Other
EID:

2-s2.0-85166299927

Part of ISSN: 23318422
Contributors: Yuan, M.; Xia, Y.; Chen, X.; Yao, J.; Wang, J.; Qiu, M.; Dong, H.; Zhou, J.; Dong, B.; Lu, L. et al.
Source: Self-asserted source
Jiawen Yao via Scopus - Elsevier

Deep Learning for Fully Automated Prediction of Overall Survival in Patients Undergoing Resection for Pancreatic Cancer: A Retrospective Multicenter Study

Annals of Surgery
2023 | Journal article
EID:

2-s2.0-85162816534

Part of ISSN: 15281140 00034932
Contributors: Yao, J.; Cao, K.; Hou, Y.; Zhou, J.; Xia, Y.; Nogues, I.; Song, Q.; Jiang, H.; Ye, X.; Lu, J. et al.
Source: Self-asserted source
Jiawen Yao via Scopus - Elsevier

Devil is in the Queries: Advancing Mask Transformers for Real-world Medical Image Segmentation and Out-of-Distribution Localization

arXiv
2023 | Other
EID:

2-s2.0-85153701137

Part of ISSN: 23318422
Contributors: Yuan, M.; Xia, Y.; Dong, H.; Chen, Z.; Yao, J.; Qiu, M.; Yan, K.; Yin, X.; Shi, Y.; Chen, X. et al.
Source: Self-asserted source
Jiawen Yao via Scopus - Elsevier

Liver Tumor Screening and Diagnosis in CT with Pixel-Lesion-Patient Network

arXiv
2023 | Other
EID:

2-s2.0-85166337897

Part of ISSN: 23318422
Contributors: Yan, K.; Yin, X.; Xia, Y.; Wang, F.; Wang, S.; Gao, Y.; Yao, J.; Li, C.; Bai, X.; Zhou, J. et al.
Source: Self-asserted source
Jiawen Yao via Scopus - Elsevier

Meta-information-Aware Dual-path Transformer for Differential Diagnosis of Multi-type Pancreatic Lesions in Multi-phase CT

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
2023 | Book
EID:

2-s2.0-85163939048

Part of ISSN: 16113349 03029743
Contributors: Zhou, B.; Xia, Y.; Yao, J.; Lu, L.; Zhou, J.; Liu, C.; Duncan, J.S.; Zhang, L.
Source: Self-asserted source
Jiawen Yao via Scopus - Elsevier

Towards a Single Unified Model for Effective Detection, Segmentation, and Diagnosis of Eight Major Cancers Using a Large Collection of CT Scans

arXiv
2023 | Other
EID:

2-s2.0-85147672771

Part of ISSN: 23318422
Contributors: Chen, J.; Xia, Y.; Yao, J.; Yan, K.; Zhang, J.; Lu, L.; Wang, F.; Zhou, B.; Qiu, M.; Yu, Q. et al.
Source: Self-asserted source
Jiawen Yao via Scopus - Elsevier

Large-scale pancreatic cancer detection via non-contrast CT and deep learning

Nature Medicine
2023-12 | Journal article
Contributors: Kai Cao; Yingda Xia; Jiawen Yao; Xu Han; Lukas Lambert; Tingting Zhang; Wei Tang; Gang Jin; Hui Jiang; Xu Fang et al.
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Crossref

Data from Deep Learning for Fully Automated Prediction of Overall Survival in Patients with Oropharyngeal Cancer Using FDG-PET Imaging

2023-03-31 | Preprint
Contributors: Nai-Ming Cheng; Jiawen Yao; Jinzheng Cai; Xianghua Ye; Shilin Zhao; Kui Zhao; Wenlan Zhou; Isabella Nogues; Yuankai Huo; Chun-Ta Liao et al.
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Data from Deep Learning for Fully Automated Prediction of Overall Survival in Patients with Oropharyngeal Cancer Using FDG-PET Imaging

2023-03-31 | Preprint
Contributors: Nai-Ming Cheng; Jiawen Yao; Jinzheng Cai; Xianghua Ye; Shilin Zhao; Kui Zhao; Wenlan Zhou; Isabella Nogues; Yuankai Huo; Chun-Ta Liao et al.
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Figure S1 from Deep Learning for Fully Automated Prediction of Overall Survival in Patients with Oropharyngeal Cancer Using FDG-PET Imaging

2023-03-31 | Preprint
Contributors: Nai-Ming Cheng; Jiawen Yao; Jinzheng Cai; Xianghua Ye; Shilin Zhao; Kui Zhao; Wenlan Zhou; Isabella Nogues; Yuankai Huo; Chun-Ta Liao et al.
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Figure S10 from Deep Learning for Fully Automated Prediction of Overall Survival in Patients with Oropharyngeal Cancer Using FDG-PET Imaging

2023-03-31 | Preprint
Contributors: Nai-Ming Cheng; Jiawen Yao; Jinzheng Cai; Xianghua Ye; Shilin Zhao; Kui Zhao; Wenlan Zhou; Isabella Nogues; Yuankai Huo; Chun-Ta Liao et al.
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Figure S11 from Deep Learning for Fully Automated Prediction of Overall Survival in Patients with Oropharyngeal Cancer Using FDG-PET Imaging

2023-03-31 | Preprint
Contributors: Nai-Ming Cheng; Jiawen Yao; Jinzheng Cai; Xianghua Ye; Shilin Zhao; Kui Zhao; Wenlan Zhou; Isabella Nogues; Yuankai Huo; Chun-Ta Liao et al.
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Figure S12 from Deep Learning for Fully Automated Prediction of Overall Survival in Patients with Oropharyngeal Cancer Using FDG-PET Imaging

2023-03-31 | Preprint
Contributors: Nai-Ming Cheng; Jiawen Yao; Jinzheng Cai; Xianghua Ye; Shilin Zhao; Kui Zhao; Wenlan Zhou; Isabella Nogues; Yuankai Huo; Chun-Ta Liao et al.
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Figure S13 from Deep Learning for Fully Automated Prediction of Overall Survival in Patients with Oropharyngeal Cancer Using FDG-PET Imaging

2023-03-31 | Preprint
Contributors: Nai-Ming Cheng; Jiawen Yao; Jinzheng Cai; Xianghua Ye; Shilin Zhao; Kui Zhao; Wenlan Zhou; Isabella Nogues; Yuankai Huo; Chun-Ta Liao et al.
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Figure S14 from Deep Learning for Fully Automated Prediction of Overall Survival in Patients with Oropharyngeal Cancer Using FDG-PET Imaging

2023-03-31 | Preprint
Contributors: Nai-Ming Cheng; Jiawen Yao; Jinzheng Cai; Xianghua Ye; Shilin Zhao; Kui Zhao; Wenlan Zhou; Isabella Nogues; Yuankai Huo; Chun-Ta Liao et al.
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Figure S15 from Deep Learning for Fully Automated Prediction of Overall Survival in Patients with Oropharyngeal Cancer Using FDG-PET Imaging

2023-03-31 | Preprint
Contributors: Nai-Ming Cheng; Jiawen Yao; Jinzheng Cai; Xianghua Ye; Shilin Zhao; Kui Zhao; Wenlan Zhou; Isabella Nogues; Yuankai Huo; Chun-Ta Liao et al.
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Figure S16 from Deep Learning for Fully Automated Prediction of Overall Survival in Patients with Oropharyngeal Cancer Using FDG-PET Imaging

2023-03-31 | Preprint
Contributors: Nai-Ming Cheng; Jiawen Yao; Jinzheng Cai; Xianghua Ye; Shilin Zhao; Kui Zhao; Wenlan Zhou; Isabella Nogues; Yuankai Huo; Chun-Ta Liao et al.
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Figure S17 from Deep Learning for Fully Automated Prediction of Overall Survival in Patients with Oropharyngeal Cancer Using FDG-PET Imaging

2023-03-31 | Preprint
Contributors: Nai-Ming Cheng; Jiawen Yao; Jinzheng Cai; Xianghua Ye; Shilin Zhao; Kui Zhao; Wenlan Zhou; Isabella Nogues; Yuankai Huo; Chun-Ta Liao et al.
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Figure S18 from Deep Learning for Fully Automated Prediction of Overall Survival in Patients with Oropharyngeal Cancer Using FDG-PET Imaging

2023-03-31 | Preprint
Contributors: Nai-Ming Cheng; Jiawen Yao; Jinzheng Cai; Xianghua Ye; Shilin Zhao; Kui Zhao; Wenlan Zhou; Isabella Nogues; Yuankai Huo; Chun-Ta Liao et al.
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Figure S19 from Deep Learning for Fully Automated Prediction of Overall Survival in Patients with Oropharyngeal Cancer Using FDG-PET Imaging

2023-03-31 | Preprint
Contributors: Nai-Ming Cheng; Jiawen Yao; Jinzheng Cai; Xianghua Ye; Shilin Zhao; Kui Zhao; Wenlan Zhou; Isabella Nogues; Yuankai Huo; Chun-Ta Liao et al.
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Figure S2 from Deep Learning for Fully Automated Prediction of Overall Survival in Patients with Oropharyngeal Cancer Using FDG-PET Imaging

2023-03-31 | Preprint
Contributors: Nai-Ming Cheng; Jiawen Yao; Jinzheng Cai; Xianghua Ye; Shilin Zhao; Kui Zhao; Wenlan Zhou; Isabella Nogues; Yuankai Huo; Chun-Ta Liao et al.
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Figure S3 from Deep Learning for Fully Automated Prediction of Overall Survival in Patients with Oropharyngeal Cancer Using FDG-PET Imaging

2023-03-31 | Preprint
Contributors: Nai-Ming Cheng; Jiawen Yao; Jinzheng Cai; Xianghua Ye; Shilin Zhao; Kui Zhao; Wenlan Zhou; Isabella Nogues; Yuankai Huo; Chun-Ta Liao et al.
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Figure S4 from Deep Learning for Fully Automated Prediction of Overall Survival in Patients with Oropharyngeal Cancer Using FDG-PET Imaging

2023-03-31 | Preprint
Contributors: Nai-Ming Cheng; Jiawen Yao; Jinzheng Cai; Xianghua Ye; Shilin Zhao; Kui Zhao; Wenlan Zhou; Isabella Nogues; Yuankai Huo; Chun-Ta Liao et al.
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Figure S5 from Deep Learning for Fully Automated Prediction of Overall Survival in Patients with Oropharyngeal Cancer Using FDG-PET Imaging

2023-03-31 | Preprint
Contributors: Nai-Ming Cheng; Jiawen Yao; Jinzheng Cai; Xianghua Ye; Shilin Zhao; Kui Zhao; Wenlan Zhou; Isabella Nogues; Yuankai Huo; Chun-Ta Liao et al.
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Figure S6 from Deep Learning for Fully Automated Prediction of Overall Survival in Patients with Oropharyngeal Cancer Using FDG-PET Imaging

2023-03-31 | Preprint
Contributors: Nai-Ming Cheng; Jiawen Yao; Jinzheng Cai; Xianghua Ye; Shilin Zhao; Kui Zhao; Wenlan Zhou; Isabella Nogues; Yuankai Huo; Chun-Ta Liao et al.
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Figure S7 from Deep Learning for Fully Automated Prediction of Overall Survival in Patients with Oropharyngeal Cancer Using FDG-PET Imaging

2023-03-31 | Preprint
Contributors: Nai-Ming Cheng; Jiawen Yao; Jinzheng Cai; Xianghua Ye; Shilin Zhao; Kui Zhao; Wenlan Zhou; Isabella Nogues; Yuankai Huo; Chun-Ta Liao et al.
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Figure S8 from Deep Learning for Fully Automated Prediction of Overall Survival in Patients with Oropharyngeal Cancer Using FDG-PET Imaging

2023-03-31 | Preprint
Contributors: Nai-Ming Cheng; Jiawen Yao; Jinzheng Cai; Xianghua Ye; Shilin Zhao; Kui Zhao; Wenlan Zhou; Isabella Nogues; Yuankai Huo; Chun-Ta Liao et al.
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Figure S9 from Deep Learning for Fully Automated Prediction of Overall Survival in Patients with Oropharyngeal Cancer Using FDG-PET Imaging

2023-03-31 | Preprint
Contributors: Nai-Ming Cheng; Jiawen Yao; Jinzheng Cai; Xianghua Ye; Shilin Zhao; Kui Zhao; Wenlan Zhou; Isabella Nogues; Yuankai Huo; Chun-Ta Liao et al.
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Supplementary Protocol from Deep Learning for Fully Automated Prediction of Overall Survival in Patients with Oropharyngeal Cancer Using FDG-PET Imaging

2023-03-31 | Preprint
Contributors: Nai-Ming Cheng; Jiawen Yao; Jinzheng Cai; Xianghua Ye; Shilin Zhao; Kui Zhao; Wenlan Zhou; Isabella Nogues; Yuankai Huo; Chun-Ta Liao et al.
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Supplementary Tables from Deep Learning for Fully Automated Prediction of Overall Survival in Patients with Oropharyngeal Cancer Using FDG-PET Imaging

2023-03-31 | Preprint
Contributors: Nai-Ming Cheng; Jiawen Yao; Jinzheng Cai; Xianghua Ye; Shilin Zhao; Kui Zhao; Wenlan Zhou; Isabella Nogues; Yuankai Huo; Chun-Ta Liao et al.
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DeepCRC: Colorectum and Colorectal Cancer Segmentation in CT Scans via Deep Colorectal Coordinate Transform

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
2022 | Book
EID:

2-s2.0-85139049148

Part of ISSN: 16113349 03029743
Contributors: Yao, L.; Xia, Y.; Zhang, H.; Yao, J.; Jin, D.; Qiu, B.; Zhang, Y.; Li, S.; Liang, Y.; Hua, X.-S. et al.
Source: Self-asserted source
Jiawen Yao via Scopus - Elsevier

Effective Opportunistic Esophageal Cancer Screening Using Noncontrast CT Imaging

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
2022 | Book
EID:

2-s2.0-85139054911

Part of ISSN: 16113349 03029743
Contributors: Yao, J.; Ye, X.; Xia, Y.; Zhou, J.; Shi, Y.; Yan, K.; Wang, F.; Lin, L.; Yu, H.; Hua, X.-S. et al.
Source: Self-asserted source
Jiawen Yao via Scopus - Elsevier

Hierarchical Transformer for Survival Prediction Using Multimodality Whole Slide Images and Genomics

arXiv
2022 | Other
EID:

2-s2.0-85143908842

Part of ISSN: 23318422
Contributors: Li, C.; Zhu, X.; Yao, J.; Huang, J.
Source: Self-asserted source
Jiawen Yao via Scopus - Elsevier

Hierarchical Transformer for Survival Prediction Using Multimodality Whole Slide Images and Genomics

Proceedings - International Conference on Pattern Recognition
2022 | Conference paper
EID:

2-s2.0-85143617738

Part of ISSN: 10514651
Contributors: Li, C.; Zhu, X.; Yao, J.; Huang, J.
Source: Self-asserted source
Jiawen Yao via Scopus - Elsevier

3D graph anatomy geometry-integrated network for pancreatic mass segmentation, diagnosis, and quantitative patient management

Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition
2021 | Conference paper
EID:

2-s2.0-85111002135

Part of ISSN: 10636919
Contributors: Zhao, T.; Cao, K.; Yao, J.; Nogues, I.; Lu, L.; Huang, L.; Xiao, J.; Yin, Z.; Zhang, L.
Source: Self-asserted source
Jiawen Yao via Scopus - Elsevier

Effective Pancreatic Cancer Screening on Non-contrast CT Scans via Anatomy-Aware Transformers

Medical Image Computing and Computer Assisted Intervention – MICCAI 2021
2021 | Book chapter
Part of ISSN: 0302-9743
Part of ISSN: 1611-3349
Source: Self-asserted source
Jiawen Yao
grade
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DeepPrognosis: Preoperative prediction of pancreatic cancer survival and surgical margin via comprehensive understanding of dynamic contrast-enhanced CT imaging and tumor-vascular contact parsing

Medical Image Analysis
2021-10 | Journal article
Part of ISSN: 1361-8415
Source: Self-asserted source
Jiawen Yao
grade
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Deep Learning for Fully Automated Prediction of Overall Survival in Patients with Oropharyngeal Cancer Using FDG-PET Imaging

Clinical Cancer Research
2021-07-15 | Journal article
Part of ISSN: 1078-0432
Part of ISSN: 1557-3265
Source: Self-asserted source
Jiawen Yao
grade
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3D Graph anatomy geometry-integrated network for pancreatic mass segmentation, diagnosis, and quantitative patient management

arXiv
2020 | Other
EID:

2-s2.0-85099861481

Part of ISSN: 23318422
Contributors: Zhao, T.; Cao, K.; Yao, J.; Nogues, I.; Lu, L.; Huang, L.; Xiao, J.; Yin, Z.; Zhang, L.
Source: Self-asserted source
Jiawen Yao via Scopus - Elsevier

DeepPrognosis: Preoperative prediction of pancreatic cancer survival and surgical margin via contrast-enhanced CT imaging

arXiv
2020 | Other
EID:

2-s2.0-85095508756

Part of ISSN: 23318422
Contributors: Yao, J.; Shi, Y.; Lu, L.; Xiao, J.; Zhang, L.
Source: Self-asserted source
Jiawen Yao via Scopus - Elsevier

DeepPrognosis: Preoperative Prediction of Pancreatic Cancer Survival and Surgical Margin via Contrast-Enhanced CT Imaging

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
2020 | Book
EID:

2-s2.0-85092707073

Part of ISSN: 16113349 03029743
Contributors: Yao, J.; Shi, Y.; Lu, L.; Xiao, J.; Zhang, L.
Source: Self-asserted source
Jiawen Yao via Scopus - Elsevier

Graph Attention Multi-instance Learning for Accurate Colorectal Cancer Staging

Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics)
2020 | Book
EID:

2-s2.0-85092691825

Part of ISSN: 16113349 03029743
Contributors: Raju, A.; Yao, J.; Haq, M.M.H.; Jonnagaddala, J.; Huang, J.
Source: Self-asserted source
Jiawen Yao via Scopus - Elsevier

Radiologic Risk Factors for Mortality of Patients with COVID-19 Pneumonia in Wuhan, China: A Retrospective Study

SSRN
2020 | Other
EID:

2-s2.0-85110084328

Part of ISSN: 15565068
Contributors: Li, X.; Chen, Z.; Ye, L.; Zhang, L.; Li, N.; Jin, D.; Gao, L.; Liu, X.; Lai, B.; Yao, J. et al.
Source: Self-asserted source
Jiawen Yao via Scopus - Elsevier

Robust pancreatic ductal adenocarcinoma segmentation with multi-institutional multi-phase partially-annotated CT scans

arXiv
2020 | Other
EID:

2-s2.0-85095535400

Part of ISSN: 23318422
Contributors: Zhang, L.; Shi, Y.; Yao, J.; Bian, Y.; Cao, K.; Jin, D.; Xiao, J.; Lu, L.
Source: Self-asserted source
Jiawen Yao via Scopus - Elsevier

Robust Pancreatic Ductal Adenocarcinoma Segmentation with Multi-institutional Multi-phase Partially-Annotated CT Scans

Medical Image Computing and Computer Assisted Intervention – MICCAI 2020
2020 | Book chapter
Part of ISSN: 0302-9743
Part of ISSN: 1611-3349
Source: Self-asserted source
Jiawen Yao
grade
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Whole slide images based cancer survival prediction using attention guided deep Multiple Instance Learning networks: A preprint

arXiv
2020 | Other
EID:

2-s2.0-85098389978

Part of ISSN: 23318422
Contributors: Yao, J.; Zhu, X.; Jonnagaddala, J.; Hawkins, N.; Huang, J.
Source: Self-asserted source
Jiawen Yao via Scopus - Elsevier

Whole Slide Images based Cancer Survival Prediction using Attention Guided Deep Multiple Instance Learning Networks

Medical Image Analysis, Volume 65, October 2020, 101789
2020-09-23 | Preprint
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Jiawen Yao
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Items per page:
Page 1 of 2

Peer review (5 reviews for 2 publications/grants)

Review activity for Journal of VLSI signal processing. (1)
Review activity for Medical image analysis. (4)