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Scopus Author ID: 55991825200

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Employment (1)

European Bioinformatics Institute: Cambridge, GB

2023-01-01 to present | Software Engineer (PDBe)
Employment
Source: Self-asserted source
Adam Midlik

Education and qualifications (1)

Masaryk University: Brno, CZ

Ph.D. (National Centre for Biomolecular Research, Faculty of Science)
Education
Source: Self-asserted source
Adam Midlik

Works (12)

PDBImages: a command-line tool for automated macromolecular structure visualization

Bioinformatics
2023-12-01 | Journal article
DOI: 10.1093/bioinformatics/btad744
Contributors: Adam Midlik; Sreenath Nair; Stephen Anyango; Mandar Deshpande; David Sehnal; Mihaly Varadi; Sameer Velankar; Xin Gao
Source: check_circle
Crossref

Mol* Volumes and Segmentations: visualization and interpretation of cell imaging data alongside macromolecular structure data and biological annotations

Nucleic Acids Research
2023-07-05 | Journal article
DOI: 10.1093/nar/gkad411
Part of ISSN: 0305-1048
Part of ISSN: 1362-4962
Contributors: Aliaksei Chareshneu; Adam Midlik; Crina-Maria Ionescu; Alexander Rose; Vladimír Horský; Alessio Cantara; Radka Svobodova; Karel Berka; David Sehnal
Source: Self-asserted source
Adam Midlik

OverProt: secondary structure consensus for protein families

Bioinformatics
2022-07-11 | Journal article
DOI: 10.1093/bioinformatics/btac384
Contributors: Adam Midlik; Ivana Hutařová Vařeková; Jan Hutař; Aliaksei Chareshneu; Karel Berka; Radka Svobodová; Lenore Cowen
Source: check_circle
Crossref

2DProts: Database of family-wide protein secondary structure diagrams

Bioinformatics
2021 | Journal article
DOI: 10.1093/bioinformatics/btab505
EID:

2-s2.0-85122184651

Part of ISSN: 14602059 13674803
Contributors: Hutařová Vařeková, I.; Hutař, J.; Midlik, A.; Horský, V.; Hladká, E.; Svobodova, R.; Berka, K.
Source: Self-asserted source
Adam Midlik via Scopus - Elsevier

Uncovering of cytochrome P450 anatomy by SecStrAnnotator

Scientific Reports
2021 | Journal article
DOI: 10.1038/s41598-021-91494-8
EID:

2-s2.0-85107752028

Part of ISSN: 20452322
Contributors: Midlik, A.; Navrátilová, V.; Moturu, T.R.; Koča, J.; Svobodová, R.; Berka, K.
Source: Self-asserted source
Adam Midlik via Scopus - Elsevier
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Preferred source (of 4)‎

Visualization and Analysis of Protein Structures with LiteMol Suite

Methods in Molecular Biology
2020 | Book chapter
DOI: 10.1007/978-1-0716-0270-6_1
EID:

2-s2.0-85078818618

Part of ISSN: 19406029 10643745
Contributors: Sehnal, D.; Svobodová, R.; Berka, K.; Pravda, L.; Midlik, A.; Koča, J.
Source: Self-asserted source
Adam Midlik via Scopus - Elsevier

Automated Family-Wide Annotation of Secondary Structure Elements

Methods in Molecular Biology
2019 | Book chapter
DOI: 10.1007/978-1-4939-9161-7_3
EID:

2-s2.0-85064239672

Part of ISSN: 19406029 10643745
Contributors: Midlik, A.; Hutařová Vařeková, I.; Hutař, J.; Moturu, T.R.; Navrátilová, V.; Koča, J.; Berka, K.; Svobodová Vařeková, R.
Source: Self-asserted source
Adam Midlik via Scopus - Elsevier

Sanguinarine is reduced by NADH through a covalent adduct

Phytochemistry
2018 | Journal article
DOI: 10.1016/j.phytochem.2017.10.010
EID:

2-s2.0-85032708672

Part of ISSN: 00319422
Contributors: Sandor, R.; Slanina, J.; Midlik, A.; Sebrlova, K.; Novotna, L.; Carnecka, M.; Slaninova, I.; Taborsky, P.; Taborska, E.; Pes, O.
Source: Self-asserted source
Adam Midlik via Scopus - Elsevier

LiteMol suite: Interactive web-based visualization of large-scale macromolecular structure data

Nature Methods
2017 | Journal article
DOI: 10.1038/nmeth.4499
EID:

2-s2.0-85036640793

Part of ISSN: 15487105 15487091
Contributors: Sehnal, D.; Deshpande, M.; Vařeková, R.S.; Mir, S.; Berka, K.; Midlik, A.; Pravda, L.; Velankar, S.; Koča, J.
Source: Self-asserted source
Adam Midlik via Scopus - Elsevier

A study on bioluminescence and photoluminescence in the earthworm Eisenia lucens

Photochemical and Photobiological Sciences
2016 | Journal article
DOI: 10.1039/c5pp00412h
EID:

2-s2.0-84957990091

Part of ISSN: 14749092 1474905X
Contributors: Pes, O.; Midlik, A.; Schlaghamersky, J.; Zitnan, M.; Taborsky, P.
Source: Self-asserted source
Adam Midlik via Scopus - Elsevier

Identification of metabolites of selected benzophenanthridine alkaloids and their toxicity evaluation

Journal of Pharmaceutical and Biomedical Analysis
2016 | Journal article
DOI: 10.1016/j.jpba.2016.01.024
EID:

2-s2.0-84954564883

Part of ISSN: 1873264X 07317085
Contributors: Sandor, R.; Midlik, A.; Sebrlova, K.; Dovrtelova, G.; Noskova, K.; Jurica, J.; Slaninova, I.; Taborska, E.; Pes, O.
Source: Self-asserted source
Adam Midlik via Scopus - Elsevier

Liquid chromatography mass spectrometry of selected benzo-phenanthridine alkaloids incubated with rat liver microsomes

Chemicke Listy
2013 | Journal article
EID:

2-s2.0-84891804749

Part of ISSN: 00092770 12137103
Contributors: Midlik, A.; Péncíková, K.; Kusnyerová, I.; Dovrtélová, G.; Nosková, K.; Jurica, J.; Táborská, E.; Pes, O.
Source: Self-asserted source
Adam Midlik via Scopus - Elsevier
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