Personal information

Websites & social links

The Alcolombri Lab

Activities

Collapse all

Employment (2)

The Hebrew University of Jerusalem: Jerusalem, IL

2023-06-30 to present (Faculty of Science)
Employment
Source: check_circle
The Hebrew University of Jerusalem

Hebrew University of Jerusalem: Jerusalem, IL

2023 to present | Principal Investigator (The Alexander Silberman Institute of Life Sciences)
Employment
Source: Self-asserted source
Uria Alcolombri

Works (31)

Growth in Low Carbon Conditions Reveals Amino-Acid-Coupled Iron Uptake

2025-01-16 | Preprint
DOI: 10.1101/2025.01.15.633289
Contributors: Juanita Lara-Gutiérrez; Jen Nguyen; Matthew R. McIlvin; Ichiko Sugiyama; Zachary Landry; Uria Alcolombri; Johannes M. Keegstra; Sammy Pontrelli; Joaquín Jiménez-Martínez; Uwe Sauer et al.
Source: check_circle
Crossref

Bacteria induce an amoeboid phase in coccolithophores that persists after bloom collapse

2025-01-06 | Preprint
DOI: 10.1101/2025.01.06.631481
Contributors: Sophie T. Zweifel; Richard J. Henshaw; Oliver Müller; Johannes M. Keegstra; Roberto Pioli; Clara Martínez-Pérez; Uria Alcolombri; Estelle Clerc; Roman Stocker
Source: check_circle
Crossref

The ultra-high affinity transport proteins of ubiquitous marine bacteria

Nature
2024-10-17 | Journal article
DOI: 10.1038/s41586-024-07924-w
Contributors: Ben E. Clifton; Uria Alcolombri; Gen-Ichiro Uechi; Colin J. Jackson; Paola Laurino
Source: check_circle
Crossref

Microbial dietary preference and interactions affect the export of lipids to the deep ocean

Science
2024-09-13 | Journal article
DOI: 10.1126/science.aab2661
Contributors: Lars Behrendt; Uria Alcolombri; Jonathan E. Hunter; Steven Smriga; Tracy Mincer; Daniel P. Lowenstein; Yutaka Yawata; François J. Peaudecerf; Vicente I. Fernandez; Helen F. Fredricks et al.
Source: check_circle
Crossref

MicrobioRaman: an open-access web repository for microbiological Raman spectroscopy data

Nature Microbiology
2024-05-07 | Journal article
DOI: 10.1038/s41564-024-01656-3
Contributors: Kang Soo Lee; Zachary Landry; Awais Athar; Uria Alcolombri; Pratchaya Pramoj Na Ayutthaya; David Berry; Philippe de Bettignies; Ji-Xin Cheng; Gabor Csucs; Li Cui et al.
Source: check_circle
Crossref

The geologic history of marine dissolved organic carbon from iron oxides

2024-05-07 | Preprint
DOI: 10.21203/rs.3.rs-3918060/v1
Contributors: Nir Galili; Stefano Bernasconi; Alon Nissan; Uria Alcolombri; Giorgia Aquila; Marcella Di Bella; Thomas Blattmann; Negar Haghipour; Francesco Italiano; Madalina Jaggi et al.
Source: check_circle
Crossref

Microbial metabolic specificity controls pelagic lipid export efficiency

2023-12-10 | Preprint
DOI: 10.1101/2023.12.08.570822
Contributors: Lars Behrendt; Uria Alcolombri; Jonathan E. Hunter; Steven Smriga; Tracy Mincer; Daniel P. Lowenstein; Yutaka Yawata; François J. Peaudecerf; Vicente I. Fernandez; Helen F. Fredricks et al.
Source: check_circle
Crossref

Strong chemotaxis by marine bacteria towards polysaccharides is enhanced by the abundant organosulfur compound DMSP

Nature Communications
2023-12-06 | Journal article
DOI: 10.1038/s41467-023-43143-z
Contributors: Estelle E. Clerc; Jean-Baptiste Raina; Johannes M. Keegstra; Zachary Landry; Sammy Pontrelli; Uria Alcolombri; Bennett S. Lambert; Valerio Anelli; Flora Vincent; Marta Masdeu-Navarro et al.
Source: check_circle
Crossref

Global warming accelerates soil heterotrophic respiration

Nature Communications
2023-06-10 | Journal article
DOI: 10.1038/s41467-023-38981-w
Contributors: Alon Nissan; Uria Alcolombri; Nadav Peleg; Nir Galili; Joaquin Jimenez-Martinez; Peter Molnar; Markus Holzner
Source: check_circle
Crossref

Encounter rates prime interactions between microorganisms

Interface Focus
2023-04-06 | Journal article
DOI: 10.1098/rsfs.2022.0059
Contributors: Jonasz Słomka; Uria Alcolombri; Francesco Carrara; Riccardo Foffi; François J. Peaudecerf; Matti Zbinden; Roman Stocker
Source: check_circle
Crossref

Ultrahigh-affinity transport proteins from ubiquitous marine bacteria reveal mechanisms and global patterns of nutrient uptake

2023-02-16 | Preprint
DOI: 10.1101/2023.02.16.528805
Contributors: Ben E. Clifton; Uria Alcolombri; Colin J. Jackson; Paola Laurino
Source: check_circle
Crossref

Single-cell stable isotope probing in microbial ecology

ISME Communications
2022-12-01 | Journal article
DOI: 10.1038/s43705-022-00142-3
Contributors: Uria Alcolombri; Roberto Pioli; Roman Stocker; David Berry
Source: check_circle
Crossref

Global warming accelerates soil heterotrophic respiration

2022-10-06 | Preprint
DOI: 10.21203/rs.3.rs-1937650/v1
Contributors: Alon Nissan; Uria Alcolombri; Nadav Peleg; Nir Galili; Joaquin Jimenez-Martinez; Peter Molnar; Markus Holzner
Source: check_circle
Crossref

Microbes contribute to setting the ocean carbon flux by altering the fate of sinking particulates

Nature Communications
2022-03-29 | Journal article
DOI: 10.1038/s41467-022-29297-2
Contributors: Trang T. H. Nguyen; Emily J. Zakem; Ali Ebrahimi; Julia Schwartzman; Tolga Caglar; Kapil Amarnath; Uria Alcolombri; François J. Peaudecerf; Terence Hwa; Roman Stocker et al.
Source: check_circle
Crossref

Using High-Sensitivity Lipidomics To Assess Microscale Heterogeneity in Oceanic Sinking Particles and Single Phytoplankton Cells

Environmental Science & Technology
2021-11-16 | Journal article
DOI: 10.1021/acs.est.1c02836
Part of ISSN: 0013-936X
Part of ISSN: 1520-5851
Source: Self-asserted source
Uria Alcolombri

Bacterial chemotaxis to saccharides is governed by a trade-off between sensing and uptake

[]
2021-11-06 | Preprint
DOI: 10.1101/2021.11.05.467490
Source: Self-asserted source
Uria Alcolombri

Sinking enhances the degradation of organic particles by marine bacteria

Nature Geoscience
2021-10 | Journal article
DOI: 10.1038/s41561-021-00817-x
Contributors: Uria Alcolombri; François J. Peaudecerf; Vicente I. Fernandez; Lars Behrendt; Kang Soo Lee; Roman Stocker
Source: check_circle
Crossref

Dimethyl sulfide mediates microbial predator–prey interactions between zooplankton and algae in the ocean

Nature Microbiology
2021-10-25 | Journal article
DOI: 10.1038/s41564-021-00971-3
Contributors: Adva Shemi; Uria Alcolombri; Daniella Schatz; Viviana Farstey; Flora Vincent; Ron Rotkopf; Shifra Ben-Dor; Miguel J. Frada; Dan S. Tawfik; Assaf Vardi
Source: check_circle
Crossref

Biochemical Characterization of a Novel Redox-Regulated Metacaspase in a Marine Diatom

Frontiers in Microbiology
2021-09-08 | Journal article
DOI: 10.3389/fmicb.2021.688199
Part of ISSN: 1664-302X
Source: Self-asserted source
Uria Alcolombri

Reactive Transport with Fluid–Solid Interactions in Dual-Porosity Media

ACS ES&T Water
2021-02-12 | Journal article
DOI: 10.1021/acsestwater.0c00043
Part of ISSN: 2690-0637
Source: Self-asserted source
Uria Alcolombri

Optofluidic Raman-activated cell sorting for targeted genome retrieval or cultivation of microbial cells with specific functions

Nature Protocols
2021-02-11 | Journal article
DOI: 10.1038/s41596-020-00427-8
Contributors: Kang Soo Lee; Fátima C. Pereira; Márton Palatinszky; Lars Behrendt; Uria Alcolombri; David Berry; Michael Wagner; Roman Stocker
Source: check_circle
Crossref

Dimethyl sulfide acts as eat-me signal during microbial predator-prey interactions in the ocean

2021-01-22 | Preprint
DOI: 10.21203/rs.3.rs-139243/v1
Contributors: Adva Shemi; Uria Alcolombri; Daniella Schatz; Viviana Farstey; Ron Rotkopf; Shifra Ben-Dor; Miguel Frada; Dan Tawfik; Assaf Vardi
Source: check_circle
Crossref

Encounter rates between bacteria and small sinking particles

New Journal of Physics
2020-04-01 | Journal article
DOI: 10.1088/1367-2630/ab73c9
Part of ISSN: 1367-2630
Source: Self-asserted source
Uria Alcolombri

Biochemical Profiling of DMSP Lyases

Marine Enzymes and Specialized Metabolism - Part B
2018 | Book chapter
DOI: 10.1016/bs.mie.2018.03.004
Part of ISSN: 0076-6879
Source: Self-asserted source
Uria Alcolombri

A redox-regulated type III metacaspase controls cell death in a marine diatom

2018-10-17 | Other
DOI: 10.1101/444109
Contributors: Shiri Graff van Creveld; Shifra Ben-Dor; Avia Mizrachi; Uria Alcolombri; Amanda Hopes; Thomas Mock; Shilo Rosenwasser; Assaf Vardi
Source: check_circle
Crossref

The Dimethylsulfoniopropionate (DMSP) Lyase and Lyase-Like Cupin Family Consists of Bona Fide DMSP lyases as Well as Other Enzymes with Unknown Function

Biochemistry
2018-06-19 | Journal article
DOI: 10.1021/acs.biochem.8b00097
Part of ISSN: 0006-2960
Part of ISSN: 1520-4995
Source: Self-asserted source
Uria Alcolombri

Assigning the Algal Source of Dimethylsulfide Using a Selective Lyase Inhibitor

ACS Chemical Biology
2017-01-20 | Journal article
DOI: 10.1021/acschembio.6b00844
Part of ISSN: 1554-8929
Part of ISSN: 1554-8937
Source: Self-asserted source
Uria Alcolombri

Identification of the algal dimethyl sulfide–releasing enzyme: A missing link in the marine sulfur cycle

Science
2015-06-26 | Journal article
DOI: 10.1126/science.aab1586
Part of ISSN: 0036-8075
Part of ISSN: 1095-9203
Source: Self-asserted source
Uria Alcolombri

DddD Is a CoA-Transferase/Lyase Producing Dimethyl Sulfide in the Marine Environment

Biochemistry
2014-09-02 | Journal article
DOI: 10.1021/bi500853s
Part of ISSN: 0006-2960
Part of ISSN: 1520-4995
Source: Self-asserted source
Uria Alcolombri

Ambiguous evidence for assigning DddQ as a dimethylsulfoniopropionate lyase and oceanic dimethylsulfide producer

Proceedings of the National Academy of Sciences
2014-05-20 | Journal article
DOI: 10.1073/pnas.1401685111
Part of ISSN: 0027-8424
Part of ISSN: 1091-6490
Source: Self-asserted source
Uria Alcolombri

Directed Evolution of Sulfotransferases and Paraoxonases by Ancestral Libraries

Journal of Molecular Biology
2011-08 | Journal article
DOI: 10.1016/j.jmb.2011.06.037
Part of ISSN: 0022-2836
Source: Self-asserted source
Uria Alcolombri

Peer review (1 review for 1 publication/grant)

Review activity for Nature microbiology. (1)
How many people are using ORCID?