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Employment (3)

東京大学: 文京区, 東京都, JP

2021-08-01 to present | 准教授
Employment
Source: Self-asserted source
Yu Toyoshima

University of Tokyo: 文京区, JP

2013-04-01 to 2021-07-31 | 助教 (Department of Biological Sciences, Graduate School of Science)
Employment
Source: Self-asserted source
Yu Toyoshima

University of Tokyo: 文京区, JP

2012-04-01 to 2013-03-31 | 特任研究員 (Department of Biological Sciences, Graduate School of Science,)
Employment
Source: Self-asserted source
Yu Toyoshima

Education and qualifications (1)

University of Tokyo: Tokyo, JP

2013-04-01 to present
Education
Source: Self-asserted source
Yu Toyoshima

Funding (1)

Systems biology analysis of neuronal network that controls salt chemotaxis of C. elegans

Source: Self-asserted source
Yu Toyoshima via DimensionsWizard

Works (18)

CGC1, a new reference genome forCaenorhabditis elegans

2024-12-05 | Preprint
Contributors: Kazuki Ichikawa; Massa J. Shoura; Karen L. Artiles; Dae-Eun Jeong; Chie Owa; Haruka Kobayashi; Yoshihiko Suzuki; Manami Kanamori; Yu Toyoshima; Yuichi Iino et al.
Source: check_circle
Crossref

Ensemble dynamics and information flow deduction from whole-brain imaging data

PLOS Computational Biology
2024-03-15 | Journal article
Contributors: Yu Toyoshima; Matthieu Louis; Hirofumi Sato; Daiki Nagata; Manami Kanamori; Moon Sun Jang; Koyo Kuze; Suzu Oe; Takayuki Teramoto; Yuishi Iwasaki et al.
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Crossref

Neuronal sensorimotor integration guiding salt concentration navigation in Caenorhabditis elegans

Proceedings of the National Academy of Sciences
2024-01-30 | Journal article
Contributors: Ayaka Matsumoto; Yu Toyoshima; Chenqi Zhang; Akihiro Isozaki; Keisuke Goda; Yuichi Iino
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Crossref

WormTracer: A precise method for worm posture analysis using temporal continuity

2023-12-12 | Preprint
Contributors: Koyo Kuze; Ukyo T. Tazawa; Karin Suwazono; Yu Toyoshima; Yuichi Iino
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Crossref

Deducing ensemble dynamics and information flow from the whole-brain imaging data

2022-11-18 | Preprint
Contributors: Yu Toyoshima; Hirofumi Sato; Daiki Nagata; Manami Kanamori; Moon Sun Jang; Koyo Kuze; Suzu Oe; Takayuki Teramoto; Yuishi Iwasaki; Ryo Yoshida et al.
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Crossref

Probabilistic generative modeling and reinforcement learning extract the intrinsic features of animal behavior

Neural Networks
2022-01 | Journal article
Contributors: Keita Mori; Naohiro Yamauchi; Haoyu Wang; Ken Sato; Yu Toyoshima; Yuichi Iino
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Crossref

Multiple sensory neurons mediate starvation-dependent aversive navigation in Caenorhabditis elegans

Proceedings of the National Academy of Sciences
2019-09-10 | Journal article
Contributors: Moon Sun Jang; Yu Toyoshima; Masahiro Tomioka; Hirofumi Kunitomo; Yuichi Iino
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Crossref

An annotation dataset facilitates automatic annotation of whole-brain activity imaging of C. elegans

2019-07-10 | Other
Contributors: Yu Toyoshima; Stephen Wu; Manami Kanamori; Hirofumi Sato; Moon Sun Jang; Suzu Oe; Yuko Murakami; Takayuki Teramoto; ChanHyun Park; Yuishi Iwasaki et al.
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Crossref

SPF-CellTracker: Tracking Multiple Cells with Strongly-Correlated Moves Using a Spatial Particle Filter

IEEE/ACM Transactions on Computational Biology and Bioinformatics
2018-11-01 | Journal article
Contributors: Osamu Hirose; Shotaro Kawaguchi; Terumasa Tokunaga; Yu Toyoshima; Takayuki Teramoto; Sayuri Kuge; Takeshi Ishihara; Yuichi Iino; Ryo Yoshida
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Crossref

Modulation of sensory information processing by a neuroglobin in Caenorhabditis elegans

Proceedings of the National Academy of Sciences
2017-06-06 | Journal article
Contributors: Shigekazu Oda; Yu Toyoshima; Mario de Bono
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Crossref

Accurate Automatic Detection of Densely Distributed Cell Nuclei in 3D Space

PLOS Computational Biology
2016-06-06 | Journal article
Contributors: Yu Toyoshima; Adam Packer; Terumasa Tokunaga; Osamu Hirose; Manami Kanamori; Takayuki Teramoto; Moon Sun Jang; Sayuri Kuge; Takeshi Ishihara; Ryo Yoshida et al.
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Crossref

Glucose Homeostatic Law: Insulin Clearance Predicts the Progression of Glucose Intolerance in Humans

Plos One
2015 | Journal article
WOSUID:

WOS:000365891600063

Contributors: Ohashi, Kaoru; Komada, Hisako; Uda, Shinsuke; Kubota, Hiroyuki; Iwaki, Toshinao; Fukuzawa, Hiroki; Komori, Yasunori; Fujii, Masashi; Toyoshima, Yu; Sakaguchi, Kazuhiko et al.
Source: Self-asserted source
Yu Toyoshima via ResearcherID

Automated detection and tracking of many cells by using 4D live-cell imaging data

Bioinformatics
2014 | Journal article
WOSUID:

WOS:000338109200006

Contributors: Tokunaga, Terumasa; Hirose, Osamu; Kawaguchi, Shotaro; Toyoshima, Yu; Teramoto, Takayuki; Ikebata, Hisaki; Kuge, Sayuri; Ishihara, Takeshi; Iino, Yuichi; Yoshida, Ryo
Source: Self-asserted source
Yu Toyoshima via ResearcherID

Reconstruction of Insulin Signal Flow from Phosphoproteome and Metabolome Data

Cell Reports
2014 | Journal article
WOSUID:

WOS:000341573500024

Contributors: Yugi, Katsuyuki; Kubota, Hiroyuki; Toyoshima, Yu; Noguchi, Rei; Kawata, Kentaro; Komori, Yasunori; Uda, Shinsuke; Kunida, Katsuyuki; Tomizawa, Yoko; Funato, Yosuke et al.
Source: Self-asserted source
Yu Toyoshima via ResearcherID

The selective control of glycolysis, gluconeogenesis and glycogenesis by temporal insulin patterns

Molecular Systems Biology
2013 | Journal article
WOSUID:

WOS:000319836700001

Contributors: Noguchi, Rei; Kubota, Hiroyuki; Yugi, Katsuyuki; Toyoshima, Yu; Komori, Yasunori; Soga, Tomoyoshi; Kuroda, Shinya
Source: Self-asserted source
Yu Toyoshima via ResearcherID

Sensitivity control through attenuation of signal transfer efficiency by negative regulation of cellular signalling

Nature Communications
2012 | Journal article
WOSUID:

WOS:000302630100032

Contributors: Toyoshima, Yu; Kakuda, Hiroaki; Fujita, Kazuhiro A.; Uda, Shinsuke; Kuroda, Shinya
Source: Self-asserted source
Yu Toyoshima via ResearcherID

Temporal Coding of Insulin Action through Multiplexing of the AKT Pathway

Molecular Cell
2012 | Journal article
WOSUID:

WOS:000306097000012

Contributors: Kubota, Hiroyuki; Noguchi, Rei; Toyoshima, Yu; Ozaki, Yu-ichi; Uda, Shinsuke; Watanabe, Kanako; Ogawa, Wataru; Kuroda, Shinya
Source: Self-asserted source
Yu Toyoshima via ResearcherID

Decoupling of Receptor and Downstream Signals in the Akt Pathway by Its Low-Pass Filter Characteristics

Science Signaling
2010 | Journal article
WOSUID:

WOS:000280403500002

Contributors: Fujita, Kazuhiro A.; Toyoshima, Yu; Uda, Shinsuke; Ozaki, Yu-ichi; Kubota, Hiroyuki; Kuroda, Shinya
Source: Self-asserted source
Yu Toyoshima via ResearcherID

Peer review (1 review for 1 publication/grant)

Review activity for Neural networks. (1)