Personal information

Emails & domains

Verified email domains

Websites & social links

BioGenies resume

Other IDs

ResearcherID: KLZ-2678-2024
Scopus Author ID: 57202320383

Keywords

amyloids, database, machine learning, aggregation, protein, amp

Countries

Poland

Activities

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Employment (1)

Medical University of Białystok: Bialystok, PL

2023-04-01 to present (Clinical Research Centre)
Employment
Source: Self-asserted source
Jarosław Chilimoniuk

Education and qualifications (4)

University of Wrocław: Wrocław, PL

2017-10-01 to 2023-07-06 | PhD student (Department of Bioinformatics and Genomics)
Education
Source: Self-asserted source
Jarosław Chilimoniuk

Brandenburg University of Technology Cottbus-Senftenberg: Cottbus, DE

2020-10-01 to 2021-09-30 | Exchange studies (Institute of Biotechnology)
Education
Source: Self-asserted source
Jarosław Chilimoniuk

University of Warsaw: Warsaw, PL

2013-10-01 to 2015-08-21 | MSc
Education
Source: Self-asserted source
Jarosław Chilimoniuk

University of Warsaw: Warsaw, PL

2010-10-01 to 2013-09-09 | BSc
Education
Source: Self-asserted source
Jarosław Chilimoniuk

Works (13)

Aggregating amyloid resources: A comprehensive review of databases on amyloid-like aggregation

Computational and Structural Biotechnology Journal
2024 | Journal article
DOI: 10.1016/j.csbj.2024.10.047
EID:

2-s2.0-85208481285

Part of ISSN: 20010370
Contributors: Iglesias, V.; Chilimoniuk, J.; Pintado-Grima, C.; Bárcenas, O.; Ventura, S.; Burdukiewicz, M.
Source: Self-asserted source
Jarosław Chilimoniuk via Scopus - Elsevier

Challenges and opportunities in processing NanoString nCounter data

Computational and Structural Biotechnology Journal
2024 | Journal article
DOI: 10.1016/j.csbj.2024.04.061
EID:

2-s2.0-85191948041

Part of ISSN: 20010370
Contributors: Chilimoniuk, J.; Erol, A.; Rödiger, S.; Burdukiewicz, M.
Source: Self-asserted source
Jarosław Chilimoniuk via Scopus - Elsevier
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Comparative analysis of anticoagulant influence on PMI estimation based on porcine blood metabolomics profile measured using GC-MS

Frontiers in Molecular Biosciences
2024 | Journal article
DOI: 10.3389/fmolb.2024.1400622
EID:

2-s2.0-85215532346

Part of ISSN: 2296889X
Contributors: Mojsak, P.; Samczuk, P.; Klimaszewska, P.; Burdukiewicz, M.; Chilimoniuk, J.; Grzesiak, K.; Pietrowska, K.; Ciborowska, J.; Niemcunowicz-Janica, A.; Kretowski, A. et al.
Source: Self-asserted source
Jarosław Chilimoniuk via Scopus - Elsevier

imputomics: web server and R package for missing values imputation in metabolomics data

Bioinformatics
2024 | Journal article
DOI: 10.1093/bioinformatics/btae098
EID:

2-s2.0-85187408843

Part of ISSN: 13674811 13674803
Contributors: Chilimoniuk, J.; Grzesiak, K.; Kała, J.; Nowakowski, D.; KreRtowski, A.; Kolenda, R.; Ciborowski, M.; Burdukiewicz, M.
Source: Self-asserted source
Jarosław Chilimoniuk via Scopus - Elsevier
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ML-based clinical decision support models based on metabolomics data

TrAC Trends in Analytical Chemistry
2024-09 | Journal article
DOI: 10.1016/j.trac.2024.117819
Part of ISSN: 0165-9936
Contributors: Michał Burdukiewicz; Jarosław Chilimoniuk; Krystyna Grzesiak; Adam Krętowski; Michal Ciborowski
Source: Self-asserted source
Jarosław Chilimoniuk via Crossref Metadata Search
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AmyloGraph: a comprehensive database of amyloid-amyloid interactions.

Nucleic acids research
2022-10 | Journal article
DOI: 10.1093/nar/gkac882
PMID: 36243982
Contributors: Burdukiewicz M; Rafacz D; Barbach A; Hubicka K; Bąkała L; Lassota A; Stecko J; Szymańska N; Wojciechowski JW; Kozakiewicz D et al.
Source: Self-asserted source
Jarosław Chilimoniuk via Europe PubMed Central
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Adhesion of Enteropathogenic, Enterotoxigenic, and Commensal <i>Escherichia coli</i> to the Major Zymogen Granule Membrane Glycoprotein 2.

Applied and environmental microbiology
2022-01 | Journal article
DOI: 10.1128/aem.02279-21
PMID: 35020452
Contributors: Bartlitz C; Kolenda R; Chilimoniuk J; Grzymajło K; Rödiger S; Bauerfeind R; Ali A; Tchesnokova V; Roggenbuck D; Schierack P
Source: Self-asserted source
Jarosław Chilimoniuk via Europe PubMed Central
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Bioinformatics methods for identification of amyloidogenic peptides show robustness to misannotated training data

Scientific Reports
2021-04 | Journal article
DOI: 10.1038/s41598-021-86530-6
Part of ISSN: 2045-2322
Contributors: Natalia Szulc; Michał Burdukiewicz; Marlena Gąsior-Głogowska; Jakub W. Wojciechowski; Jarosław Chilimoniuk; Paweł Mackiewicz; Tomas Šneideris; Vytautas Smirnovas; Malgorzata Kotulska
Source: Self-asserted source
Jarosław Chilimoniuk via Crossref Metadata Search
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countfitteR: efficient selection of count distributions to assess DNA damage

Annals of Translational Medicine
2021-04 | Journal article
DOI: 10.21037/atm-20-6363
Part of ISSN: 2305-5839
Contributors: Jarosław Chilimoniuk; Alicja Gosiewska; Jadwiga Słowik; Romano Weiss; P. Markus Deckert; Stefan Rödiger; Michał Burdukiewicz
Source: Self-asserted source
Jarosław Chilimoniuk via Crossref Metadata Search
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Conference Report: Why R? 2019

The R Journal
2020 | Journal article
WOSUID: WOS:000579493900030
Contributors: Burdukiewicz, Michal; Pietluch, Filip; Chilimoniuk, Jaroslaw; Sidorczuk, Katarzyna; Rafacz, Dominik; Jessen, Leon Eyrich; Roediger, Stefan; Kosinski, Marcin; Wojcik, Piotr
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Web of Science Researcher Profile Sync

Proteomic Screening for Prediction and Design of Antimicrobial Peptides with AmpGram

International Journal of Molecular Sciences
2020-06-17 | Journal article
DOI: 10.3390/ijms21124310
Contributors: Michał Burdukiewicz; Katarzyna Sidorczuk; Dominik Rafacz; Filip Pietluch; Jarosław Chilimoniuk; Stefan Rödiger; Przemysław Gagat
Source: check_circle
Crossref
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Prediction of Signal Peptides in Proteins from Malaria Parasites

International Journal of Molecular Sciences
2018-11 | Journal article | Author
DOI: 10.3390/ijms19123709
Contributors: Michał Burdukiewicz; Piotr Sobczyk; Jarosław Chilimoniuk; Przemysław Gagat; Paweł Mackiewicz
Source: check_circle
Multidisciplinary Digital Publishing Institute
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PhyMet2: a database and toolkit for phylogenetic and metabolic analyses of methanogens

Environmental Microbiology Reports
2018-04-06 | Journal article
DOI: 10.1111/1758-2229.12648
Part of ISSN: 1758-2229
Contributors: Michał Burdukiewicz; Przemysław Gagat; Sławomir Jabłoński; Jarosław Chilimoniuk; Michał Gaworski; Paweł Mackiewicz; Marcin Łukaszewicz
Source: Self-asserted source
Jarosław Chilimoniuk via Crossref Metadata Search
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