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Coller lab

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Scopus Author ID: 7006841615

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Employment (4)

Johns Hopkins University: Baltimore, Maryland, US

2020-07-01 to present | Professor
Employment
Source: Self-asserted source
Jeff Coller

Case Western Reserve University: Cleveland, OH, US

2014-07-01 to present | Associate Director (Center for RNA Molecular Biology)
Employment
Source: Self-asserted source
Jeff Coller

Case Western Reserve University: Cleveland, OH, US

2012-07-01 to present | Associate Professor (Center for RNA Molecular Biology)
Employment
Source: Self-asserted source
Jeff Coller

Case Western Reserve University: Cleveland, OH, US

2005-09-01 to 2012-07-01 | Assistant Professor (Center for RNA Molecular Biology)
Employment
Source: Self-asserted source
Jeff Coller

Education and qualifications (3)

University of Arizona: Tucson, AZ, US

2000-09-01 to 2005-08-01 | Post-doc (Cell and Molecular Biology / Howard Hughes Medical)
Education
Source: Self-asserted source
Jeff Coller

University of Wisconsin Madison: Madison, WI, US

1994-09-01 to 2000-03-01 | Ph.D. (Biochemistry)
Education
Source: Self-asserted source
Jeff Coller

University of Michigan: Flint, Michigan, US

1990-09-01 to 1994-05-01 | Hon BS (Biology)
Education
Source: Self-asserted source
Jeff Coller

Funding (2)

Transferring Research from a Model System to Uncover the Network that Regulates Long-Distance Signaling in Potato

2008-10-01 to 2016-09-30 | Grant
National Science Foundation - Directorate for Biological Sciences (Arlington, US)
URL: https://grants.uberresearch.com/100000076/0820659/Transferring-Research-from-a-Model-System-to-Uncover-the-Network-that-Regulates-Long-Distance-Signaling-in-Potato
GRANT_NUMBER: 0820659
Source: Self-asserted source
Jeff Coller via DimensionsWizard

Understanding the interconnection between mRNA turnover and mRNA translation

2007-06-01 to 2017-03-31 | Grant
National Institute of General Medical Sciences (Bethesda, US)
URL: https://grants.uberresearch.com/100000057/R01GM080465/Understanding-the-interconnection-between-mRNA-turnover-and-mRNA-translation
GRANT_NUMBER: 5R01GM080465-08
Source: Self-asserted source
Jeff Coller via DimensionsWizard

Works (50 of 52)

Items per page:
Page 1 of 2

tRNA therapeutics for genetic diseases

Nature Reviews Drug Discovery
2024-02 | Journal article
DOI: 10.1038/s41573-023-00829-9
Contributors: Jeff Coller; Zoya Ignatova
Source: check_circle
Crossref

Citrullination modulates antigen processing and presentation by revealing cryptic epitopes in rheumatoid arthritis

Nature Communications
2023-02-24 | Journal article
DOI: 10.1038/s41467-023-36620-y
Contributors: Ashley M. Curran; Alexander A. Girgis; Yura Jang; Jonathan D. Crawford; Mekha A. Thomas; Ryan Kawalerski; Jeff Coller; Clifton O. Bingham, III; Chan Hyun Na; Erika Darrah
Source: check_circle
Crossref

Development of a Tethered mRNA Amplifier to increase protein expression

Biotechnology Journal
2022-10 | Journal article
DOI: 10.1002/biot.202200214
Contributors: Bahareh Torkzaban; Ryan Kawalerski; Jeff Coller
Source: check_circle
Crossref

Oligodendrocyte differentiation alters tRNA modifications and codon optimality-mediated mRNA decay

Nature Communications
2022-08-25 | Journal article
DOI: 10.1038/s41467-022-32766-3
Contributors: Sophie Martin; Kevin C. Allan; Otis Pinkard; Thomas Sweet; Paul J. Tesar; Jeff Coller
Source: check_circle
Crossref

Codon optimality-mediated mRNA degradation: Linking translational elongation to mRNA stability

Molecular Cell
2022-04 | Journal article
DOI: 10.1016/j.molcel.2022.03.032
Contributors: Haneui Bae; Jeff Coller
Source: check_circle
Crossref

Roles of mRNA poly(A) tails in regulation of eukaryotic gene expression

Nature Reviews Molecular Cell Biology
2022-02 | Journal article
DOI: 10.1038/s41580-021-00417-y
Contributors: Lori A. Passmore; Jeff Coller
Source: check_circle
Crossref

Quantitative tRNA-sequencing uncovers metazoan tissue-specific tRNA regulation

2021-05-26 | Preprint
DOI: 10.21203/rs.3.pex-1031/v1
Contributors: Otis Pinkard; Sean Mcfarland; Thomas Sweet; Jeff Coller
Source: check_circle
Crossref

Quantitative tRNA-sequencing uncovers metazoan tissue-specific tRNA regulation

Nature Communications
2020-08-14 | Journal article
DOI: 10.1038/s41467-020-17879-x
Contributors: Otis Pinkard; Sean McFarland; Thomas Sweet; Jeff Coller
Source: check_circle
Crossref

Codon and amino acid content are associated with mRNA stability in mammalian cells

PLOS ONE
2020-02-13 | Journal article
DOI: 10.1371/journal.pone.0228730
Contributors: Megan E. Forrest; Yoon Ki Kim; Otis Pinkard; Sophie Martin; Thomas J. Sweet; Gavin Hanson; Jeff Coller
Source: check_circle
Crossref

Publisher Correction: Structural and molecular mechanisms for the control of eukaryotic 5′–3′ mRNA decay

Nature Structural & Molecular Biology
2019-02-21 | Journal article
DOI: 10.1038/s41594-018-0178-6
Contributors: Jeffrey S. Mugridge; Jeff Coller; John D. Gross
Source: check_circle
Crossref

Structural and molecular mechanisms for the control of eukaryotic 5′–3′ mRNA decay

Nature Structural & Molecular Biology
2018-12-05 | Journal article
DOI: 10.1038/s41594-018-0164-z
Contributors: Jeffrey S. Mugridge; Jeff Coller; John D. Gross
Source: check_circle
Crossref

Translation elongation and mRNA stability are coupled through the ribosomal A-site

RNA
2018-10-11 | Journal article
DOI: 10.1261/rna.066787.118
Contributors: Gavin Hanson; Najwa Alhusaini; Nathan Morris; Thomas Sweet; Jeff Coller
Source: check_circle
Crossref

Translation elongation and mRNA stability are coupled through the ribosomal A-site

2018-04-12 | Other
DOI: 10.1101/300467
Contributors: Gavin Hanson; Najwa Alhusaini; Nathan Morris; Thomas Sweet; Jeff Coller
Source: check_circle
Crossref

Short poly(A) tails are a conserved feature of highly expressed genes

Nature Structural & Molecular Biology
2017-12-06 | Journal article
DOI: 10.1038/nsmb.3499
Contributors: Sarah Azoubel Lima; Laura B Chipman; Angela L Nicholson; Ying-Hsin Chen; Brian A Yee; Gene W Yeo; Jeff Coller; Amy E Pasquinelli
Source: check_circle
Crossref

mRNA decapping in 3D

Nature Structural & Molecular Biology
2016-11-04 | Journal article
DOI: 10.1038/nsmb.3315
Contributors: Jeff Coller
Source: check_circle
Crossref

The deadenylase components Not2p, Not3p, and Not5p promote mRNA decapping

RNA
2016-05 | Journal article
DOI: 10.1261/rna.054742.115
Contributors: Najwa Alhusaini; Jeff Coller
Source: check_circle
Crossref

Caps and tales

RNA
2015 | Journal article
DOI: 10.1261/rna.050534.115
EID:

2-s2.0-84924981262
Contributors: Coller, J.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

Codon optimality is a major determinant of mRNA stability

Cell
2015 | Journal article
DOI: 10.1016/j.cell.2015.02.029
EID:

2-s2.0-84924567669
Contributors: Presnyak, V.; Alhusaini, N.; Chen, Y.-H.; Martin, S.; Morris, N.; Kline, N.; Olson, S.; Weinberg, D.; Baker, K.E.; Graveley, B.R. et al.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

KLF15 Establishes the Landscape of Diurnal Expression in the Heart

Cell Reports
2015 | Journal article
DOI: 10.1016/j.celrep.2015.11.038
EID:

2-s2.0-84952872569
Contributors: Zhang, L.; Prosdocimo, D.A.; Bai, X.; Fu, C.; Zhang, R.; Campbell, F.; Liao, X.; Coller, J.; Jain, M.K.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

Pausing on Polyribosomes: Make Way for Elongation in Translational Control

Cell
2015-10 | Journal article
DOI: 10.1016/j.cell.2015.09.041
Contributors: Joel D. Richter; Jeff Coller
Source: Self-asserted source
Jeff Coller via Crossref Metadata Search
grade
Preferred source (of 2)‎

A Method that Will Captivate U

Molecular Cell
2015-09 | Journal article
DOI: 10.1016/j.molcel.2015.08.017
Contributors: Sophie Martin; Jeff Coller
Source: Self-asserted source
Jeff Coller via Crossref Metadata Search
grade
Preferred source (of 2)‎

PAN-orama: Three convergent views of a eukaryotic deadenylase

Nature Structural and Molecular Biology
2014 | Journal article
DOI: 10.1038/nsmb.2850
EID:

2-s2.0-84903843649
Contributors: Martin, S.; Coller, J.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

Translation of Small Open Reading Frames within Unannotated RNA Transcripts in Saccharomyces cerevisiae

Cell Reports
2014 | Journal article
DOI: 10.1016/j.celrep.2014.05.023
EID:

2-s2.0-84903477229
Contributors: Smith, J.; Alvarez-Dominguez, J.; Kline, N.; Huynh, N.; Geisler, S.; Hu, W.; Coller, J.; Baker, K.E.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

Method for measuring mRNA decay rate in saccharomyces cerevisiae

Methods in Enzymology
2013 | Book
DOI: 10.1016/B978-0-12-420037-1.00007-5
EID:

2-s2.0-84884274631
Contributors: Hu, W.; Coller, J.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

Molecular Biology of Long Non-coding RNAs

2013 | Book
DOI: 10.1007/978-1-4614-8621-3
Contributors: Ahmad M. Khalil; Jeff Coller
Source: Self-asserted source
Jeff Coller via Crossref Metadata Search
grade
Preferred source (of 2)‎

Polysome analysis for determining mRNA and ribosome association in saccharomyces cerevisiae

Methods in Enzymology
2013 | Book
DOI: 10.1016/B978-0-12-420037-1.00011-7
EID:

2-s2.0-84884226054
Contributors: Hu, W.; Coller, J.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

RNA in unexpected places: Long non-coding RNA functions in diverse cellular contexts

Nature Reviews Molecular Cell Biology
2013 | Journal article
DOI: 10.1038/nrm3679
EID:

2-s2.0-84886252113
Contributors: Geisler, S.; Coller, J.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

The DHH1/RCKp54 family of helicases: An ancient family of proteins that promote translational silencing

Biochimica et Biophysica Acta - Gene Regulatory Mechanisms
2013 | Journal article
DOI: 10.1016/j.bbagrm.2013.03.006
EID:

2-s2.0-84878113615
Contributors: Presnyak, V.; Coller, J.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

Decapping of Long Noncoding RNAs Regulates Inducible Genes

Molecular Cell
2012 | Journal article
DOI: 10.1016/j.molcel.2011.11.025
EID:

2-s2.0-84856782922
Contributors: Geisler, S.; Lojek, L.; Khalil, A.M.; Baker, K.E.; Coller, J.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

The dead-box protein dhh1 promotes decapping by slowing ribosome movement

PLoS Biology
2012 | Journal article
DOI: 10.1371/journal.pbio.1001342
EID:

2-s2.0-84863688029
Contributors: Sweet, T.; Kovalak, C.; Coller, J.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

What comes first: Translational repression or mRNA degradation? the deepening mystery of microRNA function

Cell Research
2012 | Journal article
DOI: 10.1038/cr.2012.80
EID:

2-s2.0-84865789071
Contributors: Hu, W.; Coller, J.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

XRN1: A Major 5' to 3' Exoribonuclease in Eukaryotic Cells

Enzymes
2012 | Book
DOI: 10.1016/B978-0-12-404740-2.00005-7
EID:

2-s2.0-84866890839
Contributors: Geisler, S.; Coller, J.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

A novel origin for granulovacuolar degeneration in aging and Alzheimer's disease: Parallels to stress granules

Laboratory Investigation
2011 | Journal article
DOI: 10.1038/labinvest.2011.149
EID:

2-s2.0-82355171757
Contributors: Castellani, R.J.; Gupta, Y.; Sheng, B.; Siedlak, S.L.; Harris, P.L.R.; Coller, J.M.; Perry, G.; Lee, H.-G.; Tabaton, M.; Smith, M.A. et al.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

A quantitative assay for measuring mRNA decapping by splinted ligation reverse transcription polymerase chain reaction: qSL-RT-PCR

RNA
2011 | Journal article
DOI: 10.1261/rna.2436411
EID:

2-s2.0-79951527876
Contributors: Blewett, N.; Coller, J.; Goldstrohm, A.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

Alternate Endings: A New Story for mRNA Decapping

Molecular Cell
2010 | Journal article
DOI: 10.1016/j.molcel.2010.10.025
EID:

2-s2.0-78149430197
Contributors: Geisler, S.; Coller, J.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

Nonsense-mediated mRNA decapping occurs on polyribosomes in Saccharomyces cerevisiae

Nature Structural and Molecular Biology
2010 | Journal article
DOI: 10.1038/nsmb.1734
EID:

2-s2.0-76349083121
Contributors: Hu, W.; Petzold, C.; Coller, J.; Baker, K.E.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

Co-translational mRNA decay in Saccharomyces cerevisiae

Nature
2009 | Journal article
DOI: 10.1038/nature08265
EID:

2-s2.0-70249141564
Contributors: Hu, W.; Sweet, T.J.; Chamnongpol, S.; Baker, K.E.; Coller, J.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

RNA research in the rustbelt

RNA Biology
2009 | Journal article
EID:

2-s2.0-62549095904
Contributors: Coller, J.; Rueda, D.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

RNA research in the rustbelt

RNA Biology
2009-01 | Journal article
DOI: 10.4161/rna.6.1.7459
Contributors: Jeff Coller; David Rueda
Source: Self-asserted source
Jeff Coller via Crossref Metadata Search

Chapter 14 Methods to Determine mRNA Half-Life in Saccharomyces cerevisiae

Methods in Enzymology
2008 | Book
DOI: 10.1016/S0076-6879(08)02614-1
EID:

2-s2.0-57749207970
Contributors: Coller, J.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

Microtubule disruption stimulates P-body formation

RNA
2007 | Journal article
DOI: 10.1261/rna.355807
EID:

2-s2.0-33947726212
Contributors: Sweet, T.J.; Boyer, B.; Hu, W.; Baker, K.E.; Coller, J.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

Tethered Function Assays: An Adaptable Approach to Study RNA Regulatory Proteins

Methods in Enzymology
2007 | Book
DOI: 10.1016/S0076-6879(07)29014-7
EID:

2-s2.0-38449094651
Contributors: Coller, J.; Wickens, M.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier
grade
Preferred source (of 2)‎

Staufen- and FMRP-Containing Neuronal RNPs Are Structurally and Functionally Related to Somatic P Bodies

Neuron
2006 | Journal article
DOI: 10.1016/j.neuron.2006.10.028
EID:

2-s2.0-33845445765
Contributors: Barbee, S.A.; Estes, P.S.; Cziko, A.-M.; Hillebrand, J.; Luedeman, R.A.; Coller, J.M.; Johnson, N.; Howlett, I.C.; Geng, C.; Ueda, R. et al.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

The many routes to regulating mRNA translation

Genome Biology
2006 | Journal article
DOI: 10.1186/gb-2006-7-12-332
EID:

2-s2.0-34249746415
Contributors: Baker, K.E.; Coller, J.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

Crystal structure and functional analysis of DEAD-box protein Dhh1p

RNA
2005 | Journal article
DOI: 10.1261/rna.2920905
EID:

2-s2.0-23644449094
Contributors: Cheng, Z.; Coller, J.; Parker, R.; Song, H.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

General translational repression by activators of mRNA decapping

Cell
2005 | Journal article
DOI: 10.1016/j.cell.2005.07.012
EID:

2-s2.0-25144482816
Contributors: Coller, J.; Parker, R.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

Eukaryotic mRNA decapping

Annual Review of Biochemistry
2004 | Book
DOI: 10.1146/annurev.biochem.73.011303.074032
EID:

2-s2.0-3943051423
Contributors: Coller, J.; Parker, R.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

The yeast Apq12 protein affects nucleocytoplasmic mRNA transport

RNA
2004 | Journal article
DOI: 10.1261/rna.7420504
EID:

2-s2.0-4344714328
Contributors: Baker, K.E.; Coller, J.; Parker, R.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

Tethered function assays using 3′ untranslated regions

Methods
2002 | Journal article
DOI: 10.1016/S1046-2023(02)00016-6
EID:

2-s2.0-0036352777
Contributors: Coller, J.; Wickens, M.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier

The DEAD box helicase, Dhh1p, functions in mRNA decapping and interacts with both the decapping and deadenylase complexes

RNA
2001 | Journal article
DOI: 10.1017/S135583820101994X
EID:

2-s2.0-0035674477
Contributors: Coller, J.M.; Tucker, M.; Sheth, U.; Valencia-Sanchez, M.A.; Parker, R.
Source: Self-asserted source
Jeff Coller via Scopus - Elsevier
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Peer review (19 reviews for 7 publications/grants)

Review activity for Developmental cell. (2)
Review activity for Genome biology. (3)
Review activity for Molecular cell. (3)
Review activity for Nature biotechnology. (3)
Review activity for Nature communications (5)
Review activity for Nature reviews. (2)
Review activity for PLOS genetics. (1)
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