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Scopus Author ID: 55500769800

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Employment (2)

Academia Sinica: Taipei, TW

2020-02-01 to present | Assistant specalist (Institute of Molecular Biology)
Employment
Source: Self-asserted source
Hsin-Nan Lin

Academia Sinica: Taipei, TW

2013-02-01 to 2020-01-31 | Postdoctoral Research Fellow (Institute of Information Science)
Employment
Source: Self-asserted source
Hsin-Nan Lin

Works (21)

Mechanism and modeling of human disease-associated near-exon intronic variants that perturb RNA splicing

Nature Structural & Molecular Biology
2022-11 | Journal article
DOI: 10.1038/s41594-022-00844-1
Part of ISSN: 1545-9993
Part of ISSN: 1545-9985
Contributors: Hsin-Nan Lin; Hung-Lun Chiang; Yi-Ting Chen; Jia-Ying Su; Hsin-Nan Lin; Chen-Hsin Albert Yu ; Yu-Jen Hung; Yun-Lin Wang; Yen-Tsung Huang; Chien-Ling Lin
Source: Self-asserted source
Hsin-Nan Lin

Complete Genome Sequences and Genome-Wide Characterization of <i>Trichoderma</i> Biocontrol Agents Provide New Insights into their Evolution and Variation in Genome Organization, Sexual Development, and Fungal-Plant Interactions.

Microbiology spectrum
2021-12 | Journal article
DOI: 10.1128/spectrum.00663-21
PMID: 34908505
PMC: PMC8672877
Contributors: Li WC; Lin TC; Chen CL; Liu HC; Lin HN; Chao JL; Hsieh CH; Ni HF; Chen RS; Wang TF
Source: Self-asserted source
Hsin-Nan Lin via Europe PubMed Central

GSAlign: an efficient sequence alignment tool for intra-species genomes

BMC Genomics
2020-12 | Journal article
DOI: 10.1186/s12864-020-6569-1
Part of ISSN: 1471-2164
Source: Self-asserted source
Hsin-Nan Lin

MapCaller – An integrated and efficient tool for short-read mapping and variant calling using high-throughput sequenced data

bioRxiv
2019 | Other
DOI: 10.1101/783605
EID:

2-s2.0-85095621986

Part of ISSN: 26928205
Contributors: Lin, H.-N.; Hsu, W.-L.
Source: Self-asserted source
Hsin-Nan Lin via Scopus - Elsevier

N-GlyDE: a two-stage N-linked glycosylation site prediction incorporating gapped dipeptides and pattern-based encoding

Scientific Reports
2019 | Journal article
DOI: 10.1038/s41598-019-52341-z
EID:

2-s2.0-85074370733

Part of ISSN: 20452322
Contributors: Pitti, T.; Chen, C.-T.; Lin, H.-N.; Choong, W.-K.; Hsu, W.-L.; Sung, T.-Y.
Source: Self-asserted source
Hsin-Nan Lin via Scopus - Elsevier

StrainPro – a highly accurate Metagenomic strain-level profiling tool

bioRxiv
2019 | Other
DOI: 10.1101/807149
EID:

2-s2.0-85095496218

Part of ISSN: 26928205
Contributors: Lin, H.-N.; Lin, Y.-L.; Hsu, W.-L.
Source: Self-asserted source
Hsin-Nan Lin via Scopus - Elsevier

DART: A fast and accurate RNA-seq mapper with a partitioning strategy

Bioinformatics
2018 | Journal article
DOI: 10.1093/bioinformatics/btx558
EID:

2-s2.0-85040581081

Part of ISSN: 14602059 13674803
Contributors: Lin, H.-N.; Hsu, W.-L.
Source: Self-asserted source
Hsin-Nan Lin via Scopus - Elsevier

UniLoc: A universal protein localization site predictor for eukaryotes and prokaryotes

bioRxiv
2018 | Other
DOI: 10.1101/252916
EID:

2-s2.0-85095624198

Part of ISSN: 26928205
Contributors: Lin, H.-N.; Chen, C.-T.; Sung, T.-Y.; Hsu, W.-L.
Source: Self-asserted source
Hsin-Nan Lin via Scopus - Elsevier

Kart: A divide-and-conquer algorithm for NGS read alignment

Bioinformatics
2017 | Journal article
DOI: 10.1093/bioinformatics/btx189
EID:

2-s2.0-85026394435

Part of ISSN: 14602059 13674803
Contributors: Lin, H.-N.; Hsu, W.-L.
Source: Self-asserted source
Hsin-Nan Lin via Scopus - Elsevier

MAGIC-web: a platform for untargeted and targeted N-linked glycoprotein identification

Nucleic acids research
2016 | Journal article
DOI: 10.1093/nar/gkw254
EID:

2-s2.0-85000712521

Part of ISSN: 13624962
Contributors: Lih, T.M.; Choong, W.-K.; Chen, C.-C.; Cheng, C.-W.; Lin, H.-N.; Chen, C.-T.; Chang, H.-Y.; Hsu, W.-L.; Sung, T.-Y.
Source: Self-asserted source
Hsin-Nan Lin via Scopus - Elsevier

Improving the alignment quality of consistency based aligners with an evaluation function using synonymous protein words

PLoS ONE
2011 | Journal article
DOI: 10.1371/journal.pone.0027872
EID:

2-s2.0-82555170638

Part of ISSN: 19326203
Contributors: Lin, H.-N.; Notredame, C.; Chang, J.-M.; Sung, T.-Y.; Hsu, W.-L.
Source: Self-asserted source
Hsin-Nan Lin via Scopus - Elsevier

Improving protein secondary structure prediction based on short subsequences with local structure similarity

BMC Genomics
2010 | Journal article
DOI: 10.1186/1471-2164-11-S4-S4
EID:

2-s2.0-78649774404

Part of ISSN: 14712164
Contributors: Lin, H.-N.; Sung, T.-Y.; Ho, S.-Y.; Hsu, W.-L.
Source: Self-asserted source
Hsin-Nan Lin via Scopus - Elsevier

Protein subcellular localization prediction of eukaryotes using a knowledge-based approach

BMC Bioinformatics
2009 | Journal article
DOI: 10.1186/1471-2105-10-S15-S8
EID:

2-s2.0-71549120704

Part of ISSN: 14712105
Contributors: Lin, H.-N.; Chen, C.-T.; Sung, T.-Y.; Ho, S.-Y.; Hsu, W.-L.
Source: Self-asserted source
Hsin-Nan Lin via Scopus - Elsevier

A knowledge-based approach to Protein LOcal Structure Prediction

Series on Advances in Bioinformatics and Computational Biology
2006 | Conference paper
EID:

2-s2.0-84863020966

Part of ISSN: 17516404
Contributors: Chen, C.-T.; Lin, H.-N.; Wu, K.-P.; Sung, T.-Y.; Hsu, W.-L.
Source: Self-asserted source
Hsin-Nan Lin via Scopus - Elsevier

A two-stage classifier for protein β-turn prediction using support vector machines

2006 IEEE International Conference on Granular Computing
2006 | Conference paper
EID:

2-s2.0-33751113278
Contributors: Chiu, H.-S.; Lin, H.-N.; Lo, A.; Sung, T.-Y.; Hsu, W.-L.
Source: Self-asserted source
Hsin-Nan Lin via Scopus - Elsevier

Hyplosp: A knowledge-based approach to protien local structure prediction

Journal of Bioinformatics and Computational Biology
2006 | Journal article
DOI: 10.1142/S0219720006002466
EID:

2-s2.0-33846525649

Part of ISSN: 02197200
Contributors: Chen, C.-T.; Lin, H.-N.; Sung, T.-Y.; Hsu, W.-L.
Source: Self-asserted source
Hsin-Nan Lin via Scopus - Elsevier

GANA-A genetic algorithm for NMR backbone resonance assignment

2005 IEEE Computational Systems Bioinformatics Conference, Workshops and Poster Abstracts
2005 | Conference paper
DOI: 10.1109/CSBW.2005.68
EID:

2-s2.0-33749063197
Contributors: Lin, H.-N.; Wu, K.-P.; Chang, J.-M.; Sung, T.-Y.; Hsu, W.-L.
Source: Self-asserted source
Hsin-Nan Lin via Scopus - Elsevier
grade
Preferred source (of 4)‎

HYPROSP II - A knowledge-based hybrid method for protein secondary structure prediction based on local prediction confidence

Bioinformatics
2005 | Journal article
DOI: 10.1093/bioinformatics/bti524
EID:

2-s2.0-25144432549

Part of ISSN: 13674803 14602059
Contributors: Lin, H.-N.; Chang, J.-M.; Wu, K.-P.; Sung, T.-Y.; Hsu, W.-L.
Source: Self-asserted source
Hsin-Nan Lin via Scopus - Elsevier

HYPROSP: A hybrid protein secondary structure prediction algorithm-a knowledge-based approach

Nucleic Acids Research
2004 | Journal article
DOI: 10.1093/nar/gkh836
EID:

2-s2.0-4644354297

Part of ISSN: 03051048
Contributors: Wu, K.-P.; Lin, H.-N.; Chang, J.-M.; Sung, T.-Y.; Hsu, W.-L.
Source: Self-asserted source
Hsin-Nan Lin via Scopus - Elsevier

A new similarity measure among protein sequences

Proceedings of the 2003 IEEE Bioinformatics Conference, CSB 2003
2003 | Conference paper
DOI: 10.1109/CSB.2003.1227335
EID:

2-s2.0-84960374917
Contributors: Wu, K.-P.; Lin, H.-N.; Sung, T.-Y.; Hsu, W.-L.
Source: Self-asserted source
Hsin-Nan Lin via Scopus - Elsevier
grade
Preferred source (of 2)‎

A Two-stage Classifier for Protein B-turn Prediction Using Support Vector Machines

2006 IEEE International Conference on Granular Computing
Conference paper
DOI: 10.1109/grc.2006.1635907
Source: Self-asserted source
Hsin-Nan Lin
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