Personal information

United States

Activities

Employment (3)

Indiana University: Bloomington, Indiana, US

2019-07-01 to present | Senior Research Analyst (SICE/CNS)
Employment
Source: Self-asserted source
Ellen M. Quardokus

Indiana University: Bloomington, Indiana, US

2020-02-01 to 2024-07-31 | Research Associate (Chemistry)
Employment
Source: Self-asserted source
Ellen M. Quardokus

Indiana University: IN, IN, US

1993-08-01 to 2019-06-30 | Research Associate (Biology )
Employment
Source: Self-asserted source
Ellen M. Quardokus

Professional activities (2)

American Society for Microbiology: Washington, DC, US

1993-09-01 to present | Full
Membership
Source: Self-asserted source
Ellen M. Quardokus

American Association for the Advancement of Science: DC, DC, US

1989-02-02 to present | Research Associate (Biology )
Membership
Source: Self-asserted source
Ellen M. Quardokus

Works (34)

Construction, Deployment, and Usage of the Human Reference Atlas Knowledge Graph for Linked Open Data

2024-12-23 | Preprint
Contributors: Andreas Bueckle; Bruce W. Herr, II; Josef Hardi; Ellen M. Quardokus; Mark A. Musen; Katy Börner
Source: check_circle
Crossref

A general strategy for generating expert-guided, simplified views of ontologies

2024-12-18 | Preprint
Contributors: Anita R. Caron; Aleix Puig-Barbe; Ellen M. Quardokus; James P. Balhoff; Jasmine Belfiore; Nana-Jane Chipampe; Josef Hardi; Bruce W. Herr, II; Huseyin Kir; Paola Roncaglia et al.
Source: check_circle
Crossref

Organ Mapping Antibody Panels: a community resource for standardized multiplexed tissue imaging

Nature Methods
2023-08 | Journal article
Contributors: Ellen M. Quardokus; Diane C. Saunders; Elizabeth McDonough; John W. Hickey; Christopher Werlein; Christine Surrette; Presha Rajbhandari; Anna Martinez Casals; Hua Tian; Lisa Lowery et al.
Source: check_circle
Crossref

Anatomical structures, cell types, and biomarkers of the healthy human blood vasculature

Scientific Data
2023-07-19 | Journal article
Contributors: Avinash Boppana; Sujin Lee; Rajeev Malhotra; Marc Halushka; Katherine S Gustilo; Ellen M. Quardokus; Bruce W. Herr, II; Katy Börner; Griffin M. Weber
Source: check_circle
Crossref

Segmentation of human functional tissue units in support of a Human Reference Atlas

Communications Biology
2023-07-19 | Journal article
Contributors: Yashvardhan Jain; Leah L. Godwin; Yingnan Ju; Naveksha Sood; Ellen M. Quardokus; Andreas Bueckle; Teri Longacre; Aaron Horning; Yiing Lin; Edward D. Esplin et al.
Source: check_circle
Crossref

Specimen, biological structure, and spatial ontologies in support of a Human Reference Atlas

Scientific Data
2023-03-27 | Journal article
Contributors: Bruce W. Herr, II; Josef Hardi; Ellen M. Quardokus; Andreas Bueckle; Lu Chen; Fusheng Wang; Anita R. Caron; David Osumi-Sutherland; Mark A. Musen; Katy Börner
Source: check_circle
Crossref

Tissue registration and exploration user interfaces in support of a human reference atlas

Communications Biology
2022-12-13 | Journal article
Part of ISSN: 2399-3642
Contributors: Katy Börner; Andreas Bueckle; Bruce Herr; Leonard E. Cross; Ellen M. Quardokus; Elizabeth G. Record; Yingnan Ju; Jonathan C. Silverstein; Kristen M. Browne; Sanjay Jain et al.
Source: Self-asserted source
Ellen M. Quardokus

Specimen, Biological Structure, and Spatial Ontologies in Support of a Human Reference Atlas

2022-09-11 | Preprint
Contributors: Bruce W. Herr, II; Josef Hardi; Ellen M. Quardokus; Andreas Bueckle; Lu Chen; Fusheng Wang; Anita R. Caron; David Osumi-Sutherland; Mark A. Musen; Katy Börner
Source: check_circle
Crossref

Anatomical structures, cell types, and biomarkers of the healthy human blood vasculature

2022-03-01 | Preprint
Contributors: Avinash Boppana; Sujin Lee; Rajeev Malhotra; Marc Halushka; Ellen M Quardokus; Bruce W. Herr, II; Katy Börner; Griffin M Weber
Source: check_circle
Crossref

Tissue Registration and Exploration User Interfaces in support of a Human Reference Atlas

2021-12-30 | Preprint
Contributors: Katy Börner; Andreas Bueckle; Bruce W. Herr, II; Leonard E. Cross; Ellen M. Quardokus; Elizabeth G. Record; Yingnan Ju; Jonathan C. Silverstein; Kristen M. Browne; Sanjay Jain et al.
Source: check_circle
Crossref

Robust and generalizable segmentation of human functional tissue units

2021-11-11 | Other
Contributors: Leah L. Godwin; Yingnan Ju; Naveksha Sood; Yashvardhan Jain; Ellen M. Quardokus; Andreas Bueckle; Teri Longacre; Aaron Horning; Yiing Lin; Edward D. Esplin et al.
Source: check_circle
Crossref

Anatomical Structures, Cell Types, and Biomarkers Tables Plus 3D Reference Organs in Support of a Human Reference Atlas

2021-06-01 | Other
Contributors: Katy Börner; Sarah A. Teichmann; Ellen M. Quardokus; James Gee; Kristen Browne; David Osumi-Sutherland; Bruce W. Herr, II; Andreas Bueckle; Hrishikesh Paul; Muzlifah A. Haniffa et al.
Source: check_circle
Crossref

A modular framework for multiscale, multicellular, spatiotemporal modeling of acute primary viral infection and immune response in epithelial tissues and its application to drug therapy timing and effectiveness

PLOS Computational Biology
2020-12-21 | Journal article
Part of ISSN: 1553-7358
Contributors: T.J. Sego; Josua Aponte-Serrano; Juliano Ferrari Gianlupi; Samuel Heaps; Kira Breithaupt; Lutz Brusch; Jessica Crawshaw; James Osborne; Ellen M. Quardokus; Richard Plemper et al.
Source: Self-asserted source
Ellen M. Quardokus

Synthesis of 9-Dechlorochrysophaentin A Enables Studies Revealing Bacterial Cell Wall Biosynthesis Inhibition Phenotype in <i>B. subtilis</i>

Journal of the American Chemical Society
2020-09-23 | Journal article
Part of ISSN: 0002-7863
Part of ISSN: 1520-5126
Contributors: Christopher R. Fullenkamp; Yen-Pang Hsu; Ellen M. Quardokus; Gengxiang Zhao; Carole A. Bewley; Michael VanNieuwenhze; Gary Sulikowski
Source: Self-asserted source
Ellen M. Quardokus

The human body at cellular resolution: the NIH Human Biomolecular Atlas Program

Nature
2019-10-01 | Journal article
Source: Self-asserted source
Ellen M. Quardokus

MicrobeJ, a tool for high throughput bacterial cell detection and quantitative analysis

Nature Microbiology
2016-06 | Journal article
Part of ISSN: 2058-5276
Contributors: Adrien Ducret; Ellen M. Quardokus; Yves V. Brun
Source: Self-asserted source
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Phosphate Flow between Hybrid Histidine Kinases CheA3 and CheS3 Controls Rhodospirillum centenum Cyst Formation

PLoS Genetics
2013 | Journal article
Part of ISSN: 1553-7404
Contributors: Kuang He; Jeremiah N. Marden; Ellen M. Quardokus; Carl E. Bauer; Patrick H. Viollier
Source: Self-asserted source
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The scaffolding and signalling functions of a localization factor impact polar development

Molecular Microbiology
2012-04 | Journal article
Part of ISSN: 0950-382X
Contributors: Patrick D. Curtis; Ellen M. Quardokus; Melanie L. Lawler; Xiaoyun Guo; David Klein; Joseph C. Chen; Randy J. Arnold; Yves V. Brun
Source: Self-asserted source
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Surface contact stimulates the just-in-time deployment of bacterial adhesins

Molecular Microbiology
2011-11 | Journal article
Part of ISSN: 0950-382X
Contributors: Guanglai Li; Pamela J. B. Brown; Jay X. Tang; Jing Xu; Ellen M. Quardokus; Clay Fuqua; Yves V. Brun
Source: Self-asserted source
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Mutations in DivL and CckA Rescue a <i>divJ</i> Null Mutant of <i>Caulobacter crescentus</i> by Reducing the Activity of CtrA

Journal of Bacteriology
2006-04 | Journal article
Part of ISSN: 0021-9193
Part of ISSN: 1098-5530
Contributors: Deanne L. Pierce; Danielle S. O'Donnol; Rebecca C. Allen; June W. Javens; Ellen M. Quardokus; Yves V. Brun
Source: Self-asserted source
Ellen M. Quardokus

Cell cycle timing and developmental checkpoints in Caulobacter crescentus

Current Opinion in Microbiology
2003 | Journal article
Part of ISSN: 1369-5274
Contributors: Ellen M Quardokus; Yves V Brun
Source: Self-asserted source
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Proteomic analysis of the Caulobacter crescentus stalk indicates competence for nutrient uptake

Molecular Microbiology
2002-08 | Journal article
Part of ISSN: 0950-382X
Contributors: Marcia M. E. Ireland; Jonathan A. Karty; Ellen M. Quardokus; James P. Reilly; Yves V. Brun
Source: Self-asserted source
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DNA replication initiation is required for mid-cell positioning of FtsZ rings in Caulobacter crescentus

Molecular Microbiology
2002-07 | Journal article
Part of ISSN: 0950-382X
Contributors: Ellen M. Quardokus; Yves V. Brun
Source: Self-asserted source
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Cell cycle and positional constraints on FtsZ localization and the initiation of cell division in Caulobacter crescentus

Molecular Microbiology
2001 | Journal article
Part of ISSN: 0950-382X
Contributors: Ellen M. Quardokus; Neena Din; Yves V. Brun
Source: Self-asserted source
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Modeling Population Genetics

Science
2000-04 | Journal article
Part of ISSN: 0036-8075
Contributors: E. Quardokus
Source: Self-asserted source
Ellen M. Quardokus via Crossref Metadata Search

SOFTWARE:Keeping Track of Bases

Science
2000-02 | Journal article
Part of ISSN: 0036-8075
Contributors: E. M. Quardokus
Source: Self-asserted source
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Regulation of Stalk Elongation by Phosphate in Caulobacter crescentus

Journal of Bacteriology
2000-01 | Journal article
Part of ISSN: 0021-9193
Contributors: M. Gonin; E. M. Quardokus; D. O'Donnol; J. Maddock; Y. V. Brun
Source: Self-asserted source
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Morphological adaptation and inhibition of cell division during stationary phase inCaulobacter crescentus

Molecular Microbiology
1998-08 | Journal article
Part of ISSN: 0950-382X
Contributors: Mark A. Wortinger; Ellen M. Quardokus; Yves V. Brun
Source: Self-asserted source
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Cell cycle-dependent transcriptional and proteolytic regulation of FtsZ in Caulobacter

Genes & Development
1998-03 | Journal article
Part of ISSN: 0890-9369
Contributors: A. J. Kelly; M. J. Sackett; N. Din; E. Quardokus; Y. V. Brun
Source: Self-asserted source
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Dominant C-terminal deletions of FtsZ that affect its ability to localize in Caulobacter and its interaction with FtsA

Molecular Microbiology
1998-03 | Journal article
Part of ISSN: 0950-382X
Contributors: Neena Din; Ellen M. Quardokus; Marcella J. Sackett; Yves V. Brun
Source: Self-asserted source
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Cell cycle regulation and cell type-specific localization of the FtsZ division initiation protein in Caulobacter.

Proceedings of the National Academy of Sciences
1996-06-25 | Journal article
Part of ISSN: 0027-8424
Part of ISSN: 1091-6490
Contributors: E Quardokus; N Din; Y V Brun
Source: Self-asserted source
Ellen M. Quardokus

Use of 7-alkoxyphenoxazones, 7-alkoxycoumarins and 7-alkoxyquinolines as fluorescent substrates for rainbow trout hepatic microsomes after treatment with various inducers

Biochemical Pharmacology
1994-03 | Journal article
Part of ISSN: 0006-2952
Contributors: Mary L. Haasch; Wendy K. Graf; Ellen M. Quardokus; Richard T. Mayer; John J. Lech
Source: Self-asserted source
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Hepatic CYP1A1 Induction in Rainbow Trout by Continuous Flowthrough Exposure to β-Naphthoflavone

Toxicological Sciences
1993 | Journal article
Part of ISSN: 1096-6080
Contributors: MARY L. HAASCH; ELLEN M. QUARDOKUS; LESLIE A. SUTHERLAND; MARK S. GOODRICH; JOHN J. LECH
Source: Self-asserted source
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CYP1A1 protein and mRNA in teleosts as an environmental bioindicator: laboratory and environmental studies

Marine Environmental Research
1992-01 | Journal article
Part of ISSN: 0141-1136
Contributors: Mary L. Haasch; Ellen M. Quardokus; Leslie A. Sutherland; Mark S. Goodrich; Ruth Prince; Keith R. Cooper; John J. Lech
Source: Self-asserted source
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