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Data Science, bioinformatics, genetics, microbiology, multiOmics, AI, Bayesian, biofuel, sugarcane
Australia

Biography

Dr Virginie Perlo is a Postdoctoral Research Fellow - Data Science at Queensland University of Technology (QUT). She graduated with a PhD in Bioinformatics and Genetics at the University of Queensland (2021). She also holds two master’s degrees in molecular biology and Genetics (Pierre and Marie Curie University, now Sorbonne University) and in Aquatic Productions Management (University of Montpellier).
Dr Perlo conducts interdisciplinary research in molecular biology, multi-omics analysis and bioinformatics on complex and large datasets. Dr. Perlo also has more than ten years of experience in public and private informatics sectors, holding diverse roles such as IT engineer, project manager, and business analyst. She has a strong interest in metabolic network modelling, data visualisation, unsupervised machine learning and artificial intelligence (AI). She is currently involved in the Mind and Body performance patch project funded by the Defence Science and Technology (DST). Her role in the project as a data scientist is to generate a pipeline to combine many datasets (omics, psychological and physiological) to identify stress biomarkers and optimise human performance.

Activities

Employment (2)

Queensland University of Technology: Brisbane, Queensland, AU

Employment
Source: check_circle
Queensland University of Technology PURE

Queensland University of Technology: Kelvin Grove, QLD, AU

2022-05 to present | Postdoctoral Research Fellow Data Science (Faculty of Health, School of Biomedical Sciences, Centre for Data Science)
Employment
Source: Self-asserted source
Virginie Perlo

Education and qualifications (1)

University of Queensland: Brisbane, Queensland, AU

PhD Genetics and Bioinformatics (Queensland Alliance for Agriculture and Food Innovation (QAAFI) )
Education
Source: Self-asserted source
Virginie Perlo

Works (16)

Integrative Analysis of Gut Microbiome and Multimodal Stress Responses: Unveiling the Interplay Between Biological, Cognitive, and Physical Factors for Early Stress Detection.

46th Lorne Genome Conference 2025, lORNE, Australia, 16/02/25
2025-02-17 | Conference poster | Author
SOURCE-WORK-ID:

fb653fa7-60cb-48af-a8fc-80f35ef4cca6

Contributors: Virginie Perlo; Madusha Perera; Tony J Parker; Graham Kerr; Andrew Hunt; Tharindu Fernando; Clinton Fookes; Daniel Broszczak; Chamindie Punyadeera; Karen Sullivan et al.
Source: check_circle
Queensland University of Technology PURE

Predictive biomarkers of performance under stress

BMJ Open Sport and Exercise Medicine
2025-01-20 | Journal article | Author
SOURCE-WORK-ID:

872451a5-e1c8-4929-99bc-a48bcf9b0b5e

EID:

2-s2.0-85217460431

Contributors: Jonathan M. Flintoff; Cassandra Pattinson; Sarah Ahamed; Shahnewaz Ali; Angus Bagley; Daniel Broszczak; Blair Crewther; Louis de Waal; Shannon L. Edmed; Tharindu Fernando et al.
Source: check_circle
Queensland University of Technology PURE

Integrative analysis of gut microbiome and multimodal stress responses: Unveiling the interplay between biological, cognitive, and physical factors for early stress detection

Journal of Microbial and Biochemical Technology
2024 | Conference abstract | Author
SOURCE-WORK-ID:

cb8644f2-f071-44c7-8b9b-2971371f315b

Contributors: Virginie Perlo
Source: check_circle
Queensland University of Technology PURE

The Long Read Transcriptome of Rice (Oryza sativa ssp. japonica var. Nipponbare) Reveals Novel Transcripts

Rice
2022-12 | Journal article | Author
SOURCE-WORK-ID:

cf180ba2-3b56-4bd7-a53f-bb3d7599f799

EID:

2-s2.0-85131892504

Contributors: Sharmin Hasan; Lichun Huang; Qiaoquan Liu; Virginie Perlo; Angela O’Keeffe; Gabriel Rodrigues Alves Margarido; Agnelo Furtado; Robert J. Henry
Source: check_circle
Queensland University of Technology PURE
grade
Preferred source (of 3)‎

Transcriptome and metabolome integration in sugarcane through culm development

Food and Energy Security
2022-11 | Journal article | Author
SOURCE-WORK-ID:

db4c881e-d616-40d9-b326-4ac86d3a5d19

EID:

2-s2.0-85137850280

Contributors: Virginie Perlo; Agnelo Furtado; Frederik C. Botha; Gabriel R.A. Margarido; Katrina Hodgson-Kratky; Hemant Choudhary; John Gladden; Blake Simmons; Robert J. Henry
Source: check_circle
Queensland University of Technology PURE

Transcriptome changes in the developing sugarcane culm associated with high yield and early-season high sugar content

Theoretical And Applied Genetics
2022-05 | Journal article | Author
SOURCE-WORK-ID:

1808f9e3-5348-48a0-9e0b-c54367cc0fb2

EID:

2-s2.0-85125396626

Contributors: Virginie Perlo; Gabriel R.A. Margarido; Frederik C. Botha; Agnelo Furtado; Katrina Hodgson-Kratky; Fernando H. Correr; Robert J. Henry
Source: check_circle
Queensland University of Technology PURE
grade
Preferred source (of 3)‎

Deeper sequencing reveals a greater diversity of transcripts in the complex sugarcane genome

Proceedings of the 2021 International Conference on Sugarcane Research: Sugarcane for Sugar and Beyond
2021 | Conference paper | Author
SOURCE-WORK-ID:

046e20a4-e836-4dab-872b-75c758301c6a

Part of ISBN: 978-93-85267-30-7
Contributors: Adhini Pazhany ; Virginie Perlo; Frederik C. Botha; Agnelo Furtado; Angela O'Keeffe; Fernando H. Correr; Ardy Masouleh; Karen Aitken; Angelique D'Hont; Adam Healey et al.
Source: check_circle
Queensland University of Technology PURE

Metabolic and transcriptomic changes in the developing sugarcane culm associated with high yield and early-season high sugar content

2021 | Dissertation or Thesis | Author
SOURCE-WORK-ID:

1a5b0a02-96cc-4ece-b5e4-aa718e24b579

Contributors: Virginie Perlo
Source: check_circle
Queensland University of Technology PURE

Association of gene expression with syringyl to guaiacyl ratio in sugarcane lignin

Plant Molecular Biology
2021-05 | Journal article | Author
SOURCE-WORK-ID:

d4ff5c3b-0e95-4574-aedc-48b8a62bff34

EID:

2-s2.0-85102993503

Contributors: K. Hodgson-Kratky; Virginie Perlo; A. Furtado; H. Choudhary; J. M. Gladden; B. A. Simmons; F. Botha; R. J. Henry
Source: check_circle
Queensland University of Technology PURE
grade
Preferred source (of 2)‎

The importance of sequencing depth for a complex transcriptome

Plant and Animal Genome Conference, San Diego, United States, 11/01/20
2020 | Conference abstract | Author
SOURCE-WORK-ID:

9357ed97-a872-4a11-b943-4df78f151dab

Contributors: Adhini Sudhindra Pazhany; Virginie Perlo; Frikkie Botha; Agnelo Furtado; Angela O’Keeffe; Ardy Masouleh; Robert Henry; Karen Aitken; Angélique D'Hont; Adam Healey et al.
Source: check_circle
Queensland University of Technology PURE

Metabolic changes in the developing sugarcane culm associated with high yield and early high sugar content

Plant Direct
2020-11 | Journal article | Author
SOURCE-WORK-ID:

35e9fac3-7158-46c5-b326-ab0f03a80fee

EID:

2-s2.0-85096940152

Contributors: Virginie Perlo; Frederik C. Botha; Agnelo Furtado; Katrina Hodgson-Kratky; Robert J. Henry
Source: check_circle
Queensland University of Technology PURE
grade
Preferred source (of 2)‎

Analysis of Differences in Gene Expression Associated with Variation in Biomass Composition in Sugarcane

Proceedings (MDPI AG)
2019 | Conference abstract | Author
SOURCE-WORK-ID:

c6806e4a-fa4d-430c-a835-c5f061cb3e8f

Contributors: Virginie Perlo; Agnelo Furtado; Frikkie Botha; Robert Henry
Source: check_circle
Queensland University of Technology PURE

The impact of cDNA normalization on long-read sequencing of a complex transcriptome

Frontiers in Genetics
2019 | Journal article | Author
SOURCE-WORK-ID:

ab522b0c-274a-4319-8e01-bd75a85ab927

EID:

2-s2.0-85069047782

Contributors: Nam V. Hoang; Agnelo Furtado; Virginie Perlo; Frikkie C. Botha; Robert Henry
Source: check_circle
Queensland University of Technology PURE
grade
Preferred source (of 2)‎

The Impact of Normalization on the Composition of the Transcriptome in Polyploid Sugarcane

Plant and Animal Genome Conference, San Diego, United States, 12/01/19
2019-01-13 | Conference abstract | Author
SOURCE-WORK-ID:

2b5ba1e5-9597-488d-b22a-abf8318d10cb

Contributors: Van Nam Hoang; Agnelo Furtado; Virginie Perlo; Frederik C. Botha; Robert Henry
Source: check_circle
Queensland University of Technology PURE

Improving Sugarcane as a Feedstock

Symposium on Biotechnology for Fuels and Chemicals, Clearwater Beach, United States, 29/04/18
2018 | Conference abstract | Author
SOURCE-WORK-ID:

ba90f65c-efcb-49a6-ac6e-e13856e3e85a

Contributors: Virginie Perlo; Frederik C. Botha; Agnelo Furtado; Robert Henry
Source: check_circle
Queensland University of Technology PURE

Analysis of Differences in Gene Expression Associated with Variation in Biomass Composition in Sugarcane

Journal article
Contributors: Virginie Perlo
Source: Self-asserted source
Virginie Perlo