Personal information

No personal information available

Activities

Employment (2)

Quadram Institute Bioscience: Norwich, GB

2018-12-09 to present | Senior Research Scientist (Pathogens in the food chain)
Employment
Source: Self-asserted source
sarah bastkowski

Earlham Institute: Norwich, Norfolk, GB

2013-09-01 to 2018-12-04 | Biomathematician (Digital Biology)
Employment
Source: Self-asserted source
sarah bastkowski

Education and qualifications (1)

University of East Anglia: Norwich, Norfolk, GB

2010-09-01 to 2014-02-01 | PhD student (School of Computing Sciences)
Qualification
Source: Self-asserted source
sarah bastkowski

Works (14)

LoRTIS Software Suite: Transposon mutant analysis using long-read sequencing

2022-05-28 | Preprint
Contributors: Martin Lott; Muhammad Yasir; A. Keith Turner; Sarah Bastkowski; Andrew Page; Mark A. Webber; Ian G. Charles
Source: check_circle
Crossref

Chemical biology-whole genome engineering datasets predict new antibacterial combinations

Microbial Genomics
2021-12-24 | Journal article
Contributors: Arthur K. Turner; Muhammad Yasir; Sarah Bastkowski; Andrea Telatin; Andrew Page; Mark Webber; Ian Charles
Source: check_circle
Crossref

AlbaTraDIS: Comparative analysis of large datasets from parallel transposon mutagenesis experiments

PLOS Computational Biology
2020-07-17 | Journal article
Contributors: Andrew J. Page; Mihaela Pertea; Sarah Bastkowski; Muhammad Yasir; A. Keith Turner; Thanh Le Viet; George M. Savva; Mark A. Webber; Ian G. Charles
Source: check_circle
Crossref

TraDIS-Xpress: a high-resolution whole-genome assay identifies novel mechanisms of triclosan action and resistance

Genome Research
2020-02 | Journal article
Contributors: Muhammad Yasir; A. Keith Turner; Sarah Bastkowski; David Baker; Andrew J. Page; Andrea Telatin; Minh-Duy Phan; Leigh Monahan; George M. Savva; Aaron Darling et al.
Source: check_circle
Crossref

A new massively-parallel transposon mutagenesis approach comparing multiple datasets identifies novel mechanisms of action and resistance to triclosan

2019-04-04 | Other
Contributors: Muhammad Yasir; A. Keith Turner; Sarah Bastkowski; Andrew J. Page; Andrea Telatin; Minh-Duy Phan; Leigh G. Monahan; Aaron E. Darling; Mark A. Webber; Ian G. Charles
Source: check_circle
Crossref

AlbaTraDIS: Comparative analysis of large datasets from parallel transposon mutagenesis experiments

2019-03-31 | Other
Contributors: Andrew J. Page; Sarah Bastkowski; Muhammad Yasir; A. Keith Turner; Thanh Le Viet; George M. Savva; Mark A. Webber; Ian G. Charles
Source: check_circle
Crossref

Evolution of regulatory networks controlling adaptive traits in cichlids

2018 | Other
Contributors: Tarang K Mehta; Christopher Koch; Will Nash; Sara A Knaack; Padhmanand Sudhakar; Marton Olbei; Sarah Bastkowski; Luca Penso-Dolfin; Tamas Korcsmaros; Wilfried Haerty et al.
Source: Self-asserted source
sarah bastkowski via Crossref Metadata Search

SPECTRE: a suite of phylogenetic tools for reticulate evolution

Bioinformatics
2017-11 | Journal article
Part of ISSN: 1367-4803
Contributors: Sarah Bastkowski; Daniel Mapleson; Andreas Spillner; Taoyang Wu; Monika Balvočiūtė; Vincent Moulton; Alfonso Valencia
Source: Self-asserted source
sarah bastkowski via Crossref Metadata Search

SPECTRE: a Suite of PhylogEnetiC Tools for Reticulate Evolution

2017-07 | Other
Contributors: Sarah Bastkowski; Daniel Mapleson; Andreas Spillner; Taoyang Wu; Monika Balvociute; Vincent Moulton
Source: Self-asserted source
sarah bastkowski via Crossref Metadata Search

Heterarchy of transcription factors driving basal and luminal cell phenotypes in human urothelium

Cell Death & Differentiation
2017-03-10 | Journal article
Part of ISSN: 1350-9047
Contributors: Carl Fishwick; Janet Higgins; Lawrence Percival-Alwyn; Arianna Hustler; Joanna Pearson; Sarah Bastkowski; Simon Moxon; David Swarbreck; Chris D Greenman; Jennifer Southgate
Source: Self-asserted source
sarah bastkowski via Crossref Metadata Search

Predicting the structure and function of coalesced microbial communities

2017-01 | Other
Contributors: Pawel Sierocinski; Kim Milferstedt; Florian Bayer; Tobias Großkopf; Mark Alston; Sarah Bastkowski; David Swarbreck; Phil J Hobbs; Orkun S Soyer; Jérôme Hamelin et al.
Source: Self-asserted source
sarah bastkowski via Crossref Metadata Search

The minimum evolution problem is hard: a link between tree inference and graph clustering problems

Bioinformatics
2015-10 | Journal article
Part of ISSN: 1367-4803
Contributors: Sarah Bastkowski; Vincent Moulton; Andreas Spillner; Taoyang Wu
Source: Self-asserted source
sarah bastkowski via Crossref Metadata Search

Fishing for minimum evolution trees with Neighbor-Nets

Information Processing Letters
2014-01 | Journal article
Part of ISSN: 0020-0190
Contributors: Sarah Bastkowski; Andreas Spillner; Vincent Moulton
Source: Self-asserted source
sarah bastkowski via Crossref Metadata Search

SuperQ: Computing Supernetworks from Quartets

Journal article
DOI:

10.1109/tcbb.2013.8

Part of ISSN:

1545-5963

Source: Self-asserted source
sarah bastkowski via Crossref Metadata Search

Peer review (1 review for 1 publication/grant)

Review activity for Microbial genomics. (1)