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ResearcherID: K-3709-2016

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Employment (3)

Children's Hospital of Philadelphia: Philadelphia, PA, US

2019-11-01 to present | Assistant Professor (Center for Computational and Genomic Medicine)
Employment
Source: Self-asserted source
Wanding Zhou

Van Andel Research Institute: MI, MI, US

2015-01 to 2019-10-01 | Postdoc (Center for Epigenetics)
Employment
Source: Self-asserted source
Wanding Zhou

The University of Texas MD Anderson Cancer Center: Houston, Texas, US

2013-08 to 2015-01 | Postdoc (Bioinformatics and Computational Biology)
Employment
Source: Self-asserted source
Wanding Zhou

Education and qualifications (1)

Rice University: Houston, TX, US

2007-08 to 2013-05 | PhD (Bioengineering)
Education
Source: Self-asserted source
Wanding Zhou

Works (36)

A mammalian methylation array for profiling methylation levels at conserved sequences.

Nature communications
2022-02-10 | Journal article
DOI: 10.1038/s41467-022-28355-z
PMID: 35145108
PMC: PMC8831611
Source: Self-asserted source
Wanding Zhou

A B-cell developmental gene regulatory network is activated in infant AML.

PloS one
2021-11-18 | Journal article
DOI: 10.1371/journal.pone.0259197
PMID: 34793513
PMC: PMC8601427
Source: Self-asserted source
Wanding Zhou

EHMT2 suppresses the variation of transcriptional switches in the mouse embryo.

PLoS genetics
2021-11-18 | Journal article
DOI: 10.1371/journal.pgen.1009908
PMID: 34793451
PMC: PMC8601470
Source: Self-asserted source
Wanding Zhou

Host methylation predicts SARS-CoV-2 infection and clinical outcome.

Communications medicine
2021-10-26 | Journal article
DOI: 10.1038/s43856-021-00042-y
PMID: 35072167
PMC: PMC8767772
Source: Self-asserted source
Wanding Zhou

Analytical protocol to identify local ancestry-associated molecular features in cancer.

STAR protocols
2021-09-20 | Journal article
DOI: 10.1016/j.xpro.2021.100766
PMID: 34585150
PMC: PMC8456058
Source: Self-asserted source
Wanding Zhou

Evaluation of whole-genome DNA methylation sequencing library preparation protocols.

Epigenetics & chromatin
2021-06-19 | Journal article
DOI: 10.1186/s13072-021-00401-y
PMID: 34147133
PMC: PMC8214260
Source: Self-asserted source
Wanding Zhou

DNA methylation enables transposable element-driven genome expansion.

Proceedings of the National Academy of Sciences of the United States of America
2020-07-27 | Journal article
DOI: 10.1073/pnas.1921719117
PMID: 32719115
PMC: PMC7431005
Source: Self-asserted source
Wanding Zhou

Comprehensive Analysis of Genetic Ancestry and Its Molecular Correlates in Cancer.

Cancer cell
2020-05-01 | Journal article
DOI: 10.1016/j.ccell.2020.04.012
PMID: 32396860
PMC: PMC7328015
Source: Self-asserted source
Wanding Zhou

Large DNA Methylation Nadirs Anchor Chromatin Loops Maintaining Hematopoietic Stem Cell Identity.

Molecular cell
2020-05-01 | Journal article
DOI: 10.1016/j.molcel.2020.04.018
PMID: 32386543
PMC: PMC7357281
Source: Self-asserted source
Wanding Zhou

Activation of a Subset of Evolutionarily Young Transposable Elements and Innate Immunity Are Linked to Clinical Responses to 5-Azacytidine.

Cancer research
2020-04-03 | Journal article
DOI: 10.1158/0008-5472.can-19-1696
PMID: 32245794
PMC: PMC7507765
Source: Self-asserted source
Wanding Zhou

The Immune Landscape of Cancer.

Immunity
2019-08-01 | Journal article
DOI: 10.1016/j.immuni.2019.08.004
PMID: 31433971
Source: Self-asserted source
Wanding Zhou

Before and After: Comparison of Legacy and Harmonized TCGA Genomic Data Commons' Data.

Cell systems
2019-07-01 | Journal article
DOI: 10.1016/j.cels.2019.06.006
PMID: 31344359
PMC: PMC6707074
Source: Self-asserted source
Wanding Zhou

Mother-child transmission of epigenetic information by tunable polymorphic imprinting.

Proceedings of the National Academy of Sciences of the United States of America
2018-12-03 | Journal article
DOI: 10.1073/pnas.1815005115
PMID: 30509985
PMC: PMC6304996
Source: Self-asserted source
Wanding Zhou

The chromatin accessibility landscape of primary human cancers.

Science (New York, N.Y.)
2018-10-01 | Journal article
DOI: 10.1126/science.aav1898
PMID: 30361341
PMC: PMC6408149
Source: Self-asserted source
Wanding Zhou

Dual Inhibition of DNA and Histone Methyltransferases Increases Viral Mimicry in Ovarian Cancer Cells.

Cancer research
2018-09-05 | Journal article
DOI: 10.1158/0008-5472.can-17-3953
PMID: 30185548
PMC: PMC6191339
Source: Self-asserted source
Wanding Zhou

Switching roles for DNA and histone methylation depend on evolutionary ages of human endogenous retroviruses.

Genome research
2018-07-03 | Journal article
DOI: 10.1101/gr.234229.118
PMID: 29970451
PMC: PMC6071641
Source: Self-asserted source
Wanding Zhou

A Community Challenge for Inferring Genetic Predictors of Gene Essentialities through Analysis of a Functional Screen of Cancer Cell Lines

Cell Systems
2017 | Journal article
Source: Self-asserted source
Wanding Zhou

Comprehensive characterization, annotation and innovative use of Infinium DNA methylation BeadChip probes

Nucleic acids research
2017 | Journal article
Source: Self-asserted source
Wanding Zhou

Comprehensive evaluation of extracellular small RNA isolation methods from serum in high throughput sequencing

BMC genomics
2017 | Journal article
Source: Self-asserted source
Wanding Zhou

novoBreak: local assembly for breakpoint detection in cancer genomes

Nature methods
2017 | Journal article
Source: Self-asserted source
Wanding Zhou

The genomic landscape of tuberous sclerosis complex

Nature Communications
2017 | Journal article
Source: Self-asserted source
Wanding Zhou

Hotspot mutations delineating diverse mutational signatures and biological utilities across cancer types

BMC genomics
2016 | Journal article
Source: Self-asserted source
Wanding Zhou

Vitamin C increases viral mimicry induced by 5-aza-2′-deoxycytidine

Proceedings of the National Academy of Sciences
2016 | Journal article
Source: Self-asserted source
Wanding Zhou

An integrated map of structural variation in 2,504 human genomes

Nature
2015 | Journal article
Source: Self-asserted source
Wanding Zhou

Clinical Actionability Enhanced through Deep Targeted Sequencing of Solid Tumors

Clinical chemistry
2015 | Journal article
Source: Self-asserted source
Wanding Zhou

ClinSeK: a targeted variant characterization framework for clinical sequencing

Genome medicine
2015 | Journal article
Source: Self-asserted source
Wanding Zhou

Functional consequence of the MET-T1010I polymorphism in breast cancer

Oncotarget
2015 | Journal article
Source: Self-asserted source
Wanding Zhou

TransVar: a multilevel variant annotator for precision genomics

Nature Methods
2015 | Journal article
Source: Self-asserted source
Wanding Zhou

Bias from removing read duplication in ultra-deep sequencing experiments

Bioinformatics
2014 | Journal article
Source: Self-asserted source
Wanding Zhou

Towards accurate characterization of clonal heterogeneity based on structural variation

BMC bioinformatics
2014 | Journal article
Source: Self-asserted source
Wanding Zhou

Graph-based modeling and evolutionary analysis of microbial metabolism

2013 | Dissertation or Thesis
Source: Self-asserted source
Wanding Zhou

Modeling integrated cellular machinery using hybrid petri-boolean networks

PLoS computational biology
2013 | Journal article
Source: Self-asserted source
Wanding Zhou

Convergent evolution of modularity in metabolic networks through different community structures

BMC Evolutionary Biology
2012 | Journal article
Source: Self-asserted source
Wanding Zhou

Quantifying and Assessing the Effect of Chemical Symmetry in Metabolic Pathways

Journal of chemical information and modeling
2012 | Journal article
Source: Self-asserted source
Wanding Zhou

Properties of metabolic graphs: biological organization or representation artifacts?

BMC bioinformatics
2011 | Journal article
Source: Self-asserted source
Wanding Zhou

The strength of chemical linkage as a criterion for pruning metabolic graphs

Bioinformatics
2011 | Journal article
Source: Self-asserted source
Wanding Zhou

Peer review (16 reviews for 11 publications/grants)

Review activity for American journal of human genetics. (1)
Review activity for BMC bioinformatics (1)
Review activity for Cell genomics. (1)
Review activity for Communications biology. (2)
Review activity for F1000Research. (1)
Review activity for Genome biology. (2)
Review activity for Genome medicine. (2)
Review activity for Nature (1)
Review activity for Nature communications (2)
Review activity for Nature methods. (1)
Review activity for PLoS computational biology. (2)
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