Personal information

Other IDs

ResearcherID: F-2487-2014

Keywords

Bioinformatics, Mass Spectrometry, Proteomics, Lipidomics, Computational Biology, Cheminformatics

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Education and qualifications (2)

University of Texas at Austin: Austin, TX, US

2001-08 to 2008-05 | PhD Molecular Biology (Institute for Cellular and Molecular Biology)
Education
Source: Self-asserted source
John T. Prince

Brigham Young University: Provo, UT, US

1994 to 2000 | BS Microbiology, Chemistry Minor (Microbiology)
Education
Source: Self-asserted source
John T. Prince

Works (21)

Ceramide mediates smoking-induced insulin resistance

Faseb Journal
2013 | Journal article
Part of ISSN:

0892-6638
Contributors: Thatcher, Mikayla O.; Brassfield, Eric S.; Smith, Melissa E.; Nelson, Michael B.; Prince, John T.; Reynolds, Paul R.; Bikman, Benjamin T.
Source: Self-asserted source
John T. Prince via ResearcherID

In Vitro Oxidation of Snap-25 Leads to Double Disulfide Bond Formation and Protein Destabilization

Biophysical Journal
2013 | Journal article
Part of ISSN:

0006-3495
Contributors: Woodbury, Dixon J.; Doyle, Nathan S.; Ogawa, Nozomi; Taylor, Ryan M.; Prince, John T.
Source: Self-asserted source
John T. Prince via ResearcherID

Metriculator: quality assessment for mass spectrometry-based proteomics

Bioinformatics
2013 | Journal article
DOI:

10.1093/bioinformatics/btt510

Part of ISSN:

1367-4803;1460-2059
Contributors: Taylor, Ryan M.; Dance, Jamison; Taylor, Russ J.; Prince, John T.
Source: Self-asserted source
John T. Prince via ResearcherID

Mitochondrial fission mediates ceramide-induced metabolic disruption in skeletal muscle

Biochemical Journal
2013 | Journal article
DOI:

10.1042/BJ20130807

Part of ISSN:

0264-6021
Contributors: Smith, Melissa E.; Tippetts, Trevor S.; Brassfield, Eric S.; Tucker, Braden J.; Ockey, Adelaide; Swensen, Adam C.; Anthonymuthu, Tamil S.; Washburn, Trevor D.; Kane, Daniel A.; Prince, John T. et al.
Source: Self-asserted source
John T. Prince via ResearcherID

Mspire-Simulator: LC-MS Shotgun Proteomic Simulator for Creating Realistic Gold Standard Data

Journal of Proteome Research
2013 | Journal article
DOI:

10.1021/pr400727e

Part of ISSN:

1535-3893;1535-3907
Contributors: Noyce, Andrew B.; Smith, Rob; Dalgleish, James; Taylor, Ryan M.; Erb, K. C.; Okuda, Nozomu; Prince, John T.
Source: Self-asserted source
John T. Prince via ResearcherID

Novel algorithms and the benefits of comparative validation

Bioinformatics
2013 | Journal article
DOI:

10.1093/bioinformatics/btt176

Part of ISSN:

1367-4803
Contributors: Smith, Robert; Ventura, Dan; Prince, John T.
Source: Self-asserted source
John T. Prince via ResearcherID

Programmed cell death protein 5 may exert its apoptotic function through CCT

Faseb Journal
2013 | Journal article
Part of ISSN:

0892-6638
Contributors: Tracy, Christopher Michael; Gray, Amy J.; Howlett, Alyson C.; Shaw, Tanner Steven; Taylor, Ryan; Makaju, Aman; Prince, John T.; Valpuesta, Jose M.; Willardson, Barry Matthew
Source: Self-asserted source
John T. Prince via ResearcherID

Resolving double disulfide bond patterns in SNAP25B using liquid chromatography-ion trap mass spectrometry

Journal of Mass Spectrometry
2013 | Journal article
DOI:

10.1002/jms.3211

Part of ISSN:

1076-5174
Contributors: Ogawa, Nozomi; Taylor, Ryan M.; Woodbury, Dixon J.; Prince, John T.
Source: Self-asserted source
John T. Prince via ResearcherID

Rubabel: wrapping open Babel with Ruby

Journal of Cheminformatics
2013 | Journal article
DOI:

10.1186/1758-2946-5-35

Part of ISSN:

1758-2946
Contributors: Smith, Rob; Williamson, Ryan; Ventura, Dan; Prince, John T.
Source: Self-asserted source
John T. Prince via ResearcherID

Statistical agglomeration: peak summarization for direct infusion lipidomics

Bioinformatics
2013 | Journal article
DOI:

10.1093/bioinformatics/btt376

Part of ISSN:

1367-4803
Contributors: Smith, Rob; Anthonymuthu, Tamil S.; Ventura, Dan; Prince, John T.
Source: Self-asserted source
John T. Prince via ResearcherID

Structures of the G-beta-CCT and PhLP1-G-beta-CCT complexes reveal a molecular mechanism for G protein beta subunit folding and beta-gamma dimer assembly

Faseb Journal
2013 | Journal article
Part of ISSN:

0892-6638
Contributors: Plimpton, Rebecca; Cuellar, Jorge; Lai, Chun Wan Jeffrey; Taylor, Ryan; Carrascosa, Jose L.; Prince, John T.; Valpuesta, Jose; Willardson, Barry M.
Source: Self-asserted source
John T. Prince via ResearcherID

AICAR inhibits ceramide biosynthesis in skeletal muscle

Diabetology & Metabolic Syndrome
2012 | Journal article
DOI:

10.1186/1758-5996-4-45

Part of ISSN:

1758-5996
Contributors: Erickson, Katherine A.; Smith, Melissa E.; Anthonymuthu, Tamil S.; Evanson, Michael J.; Brassfield, Eric S.; Hodson, Aimee E.; Bressler, M. Andrew; Tucker, Braden J.; Thatcher, Mikayla O.; Prince, John T. et al.
Source: Self-asserted source
John T. Prince via ResearcherID

Oxidation of SNAP25-Syntaxin complex reduce its stability and prevents refolding

Faseb Journal
2012 | Journal article
Part of ISSN:

0892-6638
Contributors: Ogawa, Nozomi; Baba, Tomonori; Taylor, Ryan; Prince, John T.; Woodbury, Dixon J.
Source: Self-asserted source
John T. Prince via ResearcherID

Sequence and Structural Characterization of Great Salt Lake Bacteriophage CW02, a Member of the T7-Like Supergroup

Journal of Virology
2012 | Journal article
DOI:

10.1128/JVI.00407-12

Part of ISSN:

0022-538X
Contributors: Shen, Peter S.; Domek, Matthew J.; Sanz-Garcia, Eduardo; Makaju, Aman; Taylor, Ryan M.; Hoggan, Ryan; Culumber, Michele D.; Oberg, Craig J.; Breakwell, Donald P.; Prince, John T. et al.
Source: Self-asserted source
John T. Prince via ResearcherID

The Case of the Disappearing Drug Target

Molecular Cell
2010 | Journal article
DOI:

10.1016/j.molcel.2010.02.010

Part of ISSN:

1097-2765
Contributors: Prince, John T.; Ahn, Natalie G.
Source: Self-asserted source
John T. Prince via ResearcherID

Integrating shotgun proteomics and mRNA expression data to improve protein identification

Bioinformatics
2009 | Journal article
DOI:

10.1093/bioinformatics/btp168

Part of ISSN:

1367-4803
Contributors: Ramakrishnan, Smriti R.; Vogel, Christine; Prince, John T.; Li, Zhihua; Penalva, Luiz O.; Myers, Margaret; Marcotte, Edward M.; Miranker, Daniel P.; Wang, Rong
Source: Self-asserted source
John T. Prince via ResearcherID

mspire: mass spectrometry proteomics in Ruby

Bioinformatics
2008 | Journal article
DOI:

10.1093/bioinformatics/btn513

Part of ISSN:

1367-4803
Contributors: Prince, John T.; Marcotte, Edward M.
Source: Self-asserted source
John T. Prince via ResearcherID

A fast coarse filtering method for peptide identification by mass spectrometry

Bioinformatics
2006 | Journal article
DOI:

10.1093/bioinformatics/btl118

Part of ISSN:

1367-4803
Contributors: Ramakrishnan, Smriti R.; Mao, Rui; Nakorchevskiy, Aleksey A.; Prince, John T.; Willard, Willard S.; Xu, Weijia; Marcotte, Edward M.; Miranker, Daniel P.
Source: Self-asserted source
John T. Prince via ResearcherID

Chromatographic alignment of ESI-LC-MS proteomics data sets by ordered bijective interpolated warping

Analytical Chemistry
2006 | Journal article
DOI:

10.1021/ac0605344

Part of ISSN:

0003-2700
Contributors: Prince, John T.; Marcotte, Edward M.
Source: Self-asserted source
John T. Prince via ResearcherID

Mass spectrometry of the M-smegmatis proteome: Protein expression levels correlate with function, operons, and codon bias

Genome Research
2005 | Journal article
DOI:

10.1101/gr.3994105

Part of ISSN:

1088-9051
Contributors: Wang, R; Prince, JT; Marcotte, EM
Source: Self-asserted source
John T. Prince via ResearcherID

The need for a public proteomics repository

Nature Biotechnology
2004 | Journal article
DOI:

10.1038/nbt0404-471

Part of ISSN:

1087-0156
Contributors: Prince, JT; Carlson, MW; Wang, R; Lu, P; Marcotte, EM
Source: Self-asserted source
John T. Prince via ResearcherID
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