Personal information

No personal information available

Activities

Employment (2)

University of Washington Department of Genome Sciences: Seattle, WA, US

PhD Student (Genome Sciences)
Employment
Source: Self-asserted source
Elliott G. Swanson

Allen Institute for Immunology: Seattle, Washington, US

2019-04-01 to 2022-07-01 (Molecular Biology & Biochemistry)
Employment
Source: Self-asserted source
Elliott G. Swanson

Works (21)

Synchronized long-read genome, methylome, epigenome and transcriptome profiling resolve a Mendelian condition

Nature Genetics
2025-02 | Journal article
Contributors: Mitchell R. Vollger; Jonas Korlach; Kiara C. Eldred; Elliott Swanson; Jason G. Underwood; Stephanie C. Bohaczuk; Yizi Mao; Yong-Han H. Cheng; Jane Ranchalis; Elizabeth E. Blue et al.
Source: check_circle
Crossref

Resolving the chromatin impact of mosaic variants with targeted Fiber-seq

Genome Research
2024-12 | Journal article
Contributors: Stephanie C. Bohaczuk; Zachary J. Amador; Chang Li; Benjamin J. Mallory; Elliott G. Swanson; Jane Ranchalis; Mitchell R. Vollger; Katherine M. Munson; Tom Walsh; Morgan O. Hamm et al.
Source: check_circle
Crossref

Deaminase-assisted single-molecule and single-cell chromatin fiber sequencing

2024-11-06 | Preprint
Contributors: Elliott G. Swanson; Yizi Mao; Benjamin J. Mallory; Mitchell R. Vollger; Jane Ranchalis; Stephanie C. Bohaczuk; Nancy L. Parmalee; James T. Bennett; Andrew B. Stergachis
Source: check_circle
Crossref

Resolving the chromatin impact of mosaic variants with targeted Fiber-seq

2024-07-13 | Preprint
Contributors: Stephanie C. Bohaczuk; Zachary J. Amador; Chang Li; Benjamin J. Mallory; Elliott G Swanson; Jane Ranchalis; Mitchell R. Vollger; Katherine M. Munson; Tom Walsh; Morgan O. Hamm et al.
Source: check_circle
Crossref

A haplotype-resolved view of human gene regulation

2024-06-16 | Preprint
Contributors: Mitchell R. Vollger; Elliott G. Swanson; Shane J. Neph; Jane Ranchalis; Katherine M. Munson; Ching-Huang Ho; Adriana E. Sedeño-Cortés; William E. Fondrie; Stephanie C. Bohaczuk; Yizi Mao et al.
Source: check_circle
Crossref

STR mutations on chromosome 15q cause thyrotropin resistance by activating a primate-specific enhancer of MIR7-2/MIR1179

Nature Genetics
2024-05 | Journal article
Contributors: Helmut Grasberger; Alexandra M. Dumitrescu; Xiao-Hui Liao; Elliott G. Swanson; Roy E. Weiss; Panudda Srichomkwun; Theodora Pappa; Junfeng Chen; Takashi Yoshimura; Phillip Hoffmann et al.
Source: check_circle
Crossref

Author Correction: Trimodal single-cell profiling reveals a novel pediatric CD8αα+ T cell subset and broad age-related molecular reprogramming across the T cell compartment

Nature Immunology
2024-03 | Journal article
Contributors: Zachary Thomson; Ziyuan He; Elliott Swanson; Katherine Henderson; Cole Phalen; Samir Rachid Zaim; Mark-Phillip Pebworth; Lauren Y. Okada; Alexander T. Heubeck; Charles R. Roll et al.
Source: check_circle
Crossref

Trimodal single-cell profiling reveals a novel pediatric CD8αα+ T cell subset and broad age-related molecular reprogramming across the T cell compartment

Nature Immunology
2023-11 | Journal article
Contributors: Zachary Thomson; Ziyuan He; Elliott Swanson; Katherine Henderson; Cole Phalen; Samir Rachid Zaim; Mark-Phillip Pebworth; Lauren Y. Okada; Alexander T. Heubeck; Charles R. Roll et al.
Source: check_circle
Crossref

Synchronized long-read genome, methylome, epigenome, and transcriptome for resolving a Mendelian condition

2023-09-27 | Preprint
Contributors: Mitchell R. Vollger; Jonas Korlach; Kiara C. Eldred; Elliott Swanson; Jason G. Underwood; Yong-Han H. Cheng; Jane Ranchalis; Yizi Mao; Elizabeth E. Blue; Ulrike Schwarze et al.
Source: check_circle
Crossref

DNA-m6A calling and integrated long-read epigenetic and genetic analysis with fibertools

2023-04-21 | Preprint
Contributors: Anupama Jha; Stephanie C. Bohaczuk; Yizi Mao; Jane Ranchalis; Benjamin J. Mallory; Alan T. Min; Morgan O. Hamm; Elliott Swanson; Danilo Dubocanin; Connor Finkbeiner et al.
Source: check_circle
Crossref

A comprehensive platform for analyzing longitudinal multi-omics data

Nature Communications
2023-03-27 | Journal article
Contributors: Suhas V. Vasaikar; Adam K. Savage; Qiuyu Gong; Elliott Swanson; Aarthi Talla; Cara Lord; Alexander T. Heubeck; Julian Reading; Lucas T. Graybuck; Paul Meijer et al.
Source: check_circle
Crossref

BarWare: efficient software tools for barcoded single-cell genomics

BMC Bioinformatics
2022-12 | Journal article
Contributors: Elliott Swanson; Julian Reading; Lucas T. Graybuck; Peter J. Skene
Source: check_circle
Crossref

Distinct Heterogeneity in the Naive T cell Compartments of Children and Adults

2022-10-07 | Preprint
Contributors: Claire E. Gustafson; Zachary Thomson; Ziyuan He; Elliott Swanson; Katherine Henderson; Mark-Phillip Pebworth; Lauren Y. Okada; Alexander T. Heubeck; Charles R. Roll; Veronica Hernandez et al.
Source: check_circle
Crossref

Optimized workflow for human PBMC multiomic immunosurveillance studies

STAR Protocols
2021-12 | Journal article
Contributors: Palak C. Genge; Charles R. Roll; Alexander T. Heubeck; Elliott Swanson; Nina Kondza; Cara Lord; Morgan Weiss; Veronica Hernandez; Cole Phalen; Zachary Thomson et al.
Source: check_circle
Crossref

TEA-seq v4

2021-07-27 | Preprint
Contributors: Elliott Swanson; Lucas Graybuck; Peter J Skene
Source: check_circle
Crossref

Multimodal analysis for human ex vivo studies shows extensive molecular changes from delays in blood processing

iScience
2021-05 | Journal article
Contributors: Adam K. Savage; Miriam V. Gutschow; Tony Chiang; Kathy Henderson; Richard Green; Monica Chaudhari; Elliott Swanson; Alexander T. Heubeck; Nina Kondza; Kelli C. Burley et al.
Source: check_circle
Crossref

Simultaneous trimodal single-cell measurement of transcripts, epitopes, and chromatin accessibility using TEA-seq

eLife
2021-04-09 | Journal article
Contributors: Elliott Swanson; Cara Lord; Julian Reading; Alexander T Heubeck; Palak C Genge; Zachary Thomson; Morgan DA Weiss; Xiao-jun Li; Adam K Savage; Richard R Green et al.
Source: check_circle
Crossref

TEA-seq v3

2021-03-08 | Preprint
Contributors: Elliott Swanson; Lucas Graybuck; Peter J Skene
Source: check_circle
Crossref

TEA-seq v2

2020-12-01 | Preprint
Contributors: Elliott Swanson; Lucas Graybuck; Peter J Skene
Source: check_circle
Crossref

Multimodal Analysis for Human ex vivo Studies Shows Extensive Molecular Changes from Delays in Blood Processing

2020-10-19 | Preprint
Contributors: Adam K. Savage; Miriam V. Gutschow; Tony Chiang; Kathy Henderson; Richard Green; Monica Chaudhari; Elliott Swanson; Alexander T. Heubeck; Nina Kondza; Kelli C. Burley et al.
Source: check_circle
Crossref

TEA-seq: a trimodal assay for integrated single cell measurement of transcription, epitopes, and chromatin accessibility

2020-09-04 | Preprint
Contributors: Elliott Swanson; Cara Lord; Julian Reading; Alexander T. Heubeck; Adam K. Savage; Richard Green; Xiao-jun Li; Troy R. Torgerson; Thomas F. Bumol; Lucas T. Graybuck et al.
Source: check_circle
Crossref