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D-aminoacyl-tRNA-deacylase, translation, aminoacyl-tRNA synthetases, quality control, ribosome
Ukraine, United States

Activities

Employment (5)

The University of Texas Medical Branch : Galveston, TX, US

2021-02-10 to present | Postdoctoral Fellow (Microbilogy and Immunology)
Employment
Source: Self-asserted source
Mariia Rybak

Institute of Molecular Biology and Genetics of National Academy of Sciences of Ukraine: Kyiv, UA

2016-11-01 to 2020-11-30 | Junior research fellow (Department of Protein Synthesis Enzymology)
Employment
Source: Self-asserted source
Mariia Rybak

Institute of Molecular Biology and Genetics of National Academy of Sciences of Ukraine: Kyiv, UA

2013-11-01 to 2016-10-30 | PhD student (Department of Protein Synthesis Enzymology)
Employment
Source: Self-asserted source
Mariia Rybak

Institute of Molecular Biology and Genetics of National Academy of Sciences of Ukraine: Kyiv, UA

2012-09-01 to 2013-06-27 | Master Student (Department of Cell Signaling)
Employment
Source: Self-asserted source
Mariia Rybak

Institute of Molecular Biology and Genetics of National Academy of Sciences of Ukraine: Kyiv, UA

2009-06-01 to 2012-08-30 | Student (Department of Synthetic Bioregulators)
Employment
Source: Self-asserted source
Mariia Rybak

Education and qualifications (1)

Taras Shevchenko National University of Kyiv: Kyiv, UA

2007-09-01 to 2013-06-27 | Master of Biochemistry, researcher (Biochemistry)
Education
Source: Self-asserted source
Mariia Rybak

Professional activities (1)

Shevchenko Scientific Society: New York, US

2020-12-18 | The Platon Kostyuk Award for young Ukrainian scientists in biomedical research
Distinction
Source: Self-asserted source
Mariia Rybak

Funding (1)

Structural basis for ribosome hibernation in Mycobacteria

2023-09 to 2025-08 | Award
McLaughlin Endowment (Galveston, TX, US)
Source: Self-asserted source
Mariia Rybak

Works (15)

The ribosome termination complex remodels release factor RF3 and ejects GDP

Nature Structural & Molecular Biology
2024-12 | Journal article
Contributors: Li Li; Mariia Yu. Rybak; Jinzhong Lin; Matthieu G. Gagnon
Source: check_circle
Crossref

Structures of the ribosome bound to EF-Tu–isoleucine tRNA elucidate the mechanism of AUG avoidance

Nature Structural & Molecular Biology
2024-05 | Journal article
Contributors: Mariia Yu. Rybak; Matthieu G. Gagnon
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

A new family of bacterial ribosome hibernation factors

Nature
2024-02-29 | Journal article
Contributors: Karla Helena-Bueno; Mariia Yu. Rybak; Chinenye L. Ekemezie; Rudi Sullivan; Charlotte R. Brown; Charlotte Dingwall; Arnaud Baslé; Claudia Schneider; James P. R. Connolly; James N. Blaza et al.
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Discovery of novel antituberculosis agents among 3-phenyl-5-(1-phenyl-1H-[1,2,3]triazol-4-yl)-[1,2,4]oxadiazole derivatives targeting aminoacyl-tRNA synthetases

Scientific Reports
2021 | Journal article
EID:

2-s2.0-85103746409

Part of ISSN: 20452322
Contributors: Rybak, M.Y.; Balanda, A.O.; Yatsyshyna, A.P.; Kotey, I.M.; Starosyla, S.A.; Bdzhola, V.G.; Lukash, L.L.; Yarmoluk, S.M.; Tukalo, M.A.; Volynets, G.P.
Source: Self-asserted source
Mariia Rybak via Scopus - Elsevier

Rational Design of Hit Compounds Targeting Staphylococcus aureus Threonyl-tRNA Synthetase

ACS Omega
2021-09-28 | Journal article
Contributors: Mariia Yu. Rybak; Olga I. Gudzera; Oksana B. Gorbatiuk; Mariia O. Usenko; Sergiy M. Yarmoluk; Michael A. Tukalo; Galyna P. Volynets
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

A global metagenomic map of urban microbiomes and antimicrobial resistance.

Cell
2021-05 | Journal article
Contributors: Danko D; Bezdan D; Afshin EE; Ahsanuddin S; Bhattacharya C; Butler DJ; Chng KR; Donnellan D; Hecht J; Jackson K et al.
Source: Self-asserted source
Mariia Rybak via Europe PubMed Central
grade
Preferred source (of 2)‎

Dual-target inhibitors of mycobacterial aminoacyl-tRNA synthetases among N-benzylidene-N′-thiazol-2-yl-hydrazines

MedChemComm
2019 | Journal article
Contributors: Oksana P. Kovalenko; Galyna P. Volynets; Mariia Yu. Rybak; Sergiy A. Starosyla; Olga I. Gudzera; Sergiy S. Lukashov; Volodymyr G. Bdzhola; Sergiy M. Yarmoluk; Helena I. Boshoff; Michael A. Tukalo
Source: check_circle
Crossref

Substrate-assisted mechanism of catalytic hydrolysis of misaminoacylated tRNA required for protein synthesis fidelity

Biochemical Journal
2019 | Journal article
EID:

2-s2.0-85062556998

Contributors: Ilchenko, M.M.; Rybak, M.Yu.; Rayevsky, A.V.; Kovalenko, O.P.; Dubey, I.Ya.; Tukalo, M.A.
Source: Self-asserted source
Mariia Rybak via Scopus - Elsevier
grade
Preferred source (of 2)‎

Dual-targeted hit identification using pharmacophore screening

Journal of Computer-Aided Molecular Design
2019-11-06 | Journal article
Part of ISSN: 0920-654X
Part of ISSN: 1573-4951
Source: Self-asserted source
Mariia Rybak
grade
Preferred source (of 2)‎

Stereospecificity control in aminoacyl-tRNA-synthetases: new evidence of d-amino acids activation and editing

Nucleic Acids Research
2019-10-10 | Journal article
Contributors: Mariia Yu Rybak; Alexey V Rayevsky; Olga I Gudzera; Michael A Tukalo
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Expression and purification of full-length alanyl-tRNA-synthetasfrom thermus thermophilus HB27

Biopolymers and Cell
2018 | Journal article
EID:

2-s2.0-85060756299

Contributors: Rybak, M.Y.; Priss, A.E.; Gudzera, O.I.; Kovalchuk, A.O.; Kryklyvyi, I.A.; Tukalo, M.A.
Source: Self-asserted source
Mariia Rybak via Scopus - Elsevier

The Dual Role of the 2'-OH Group of A76 tRNATyr in the Prevention of d-tyrosine Mistranslation

Journal of Molecular Biology
2018-06-25 | Journal article
Source: Self-asserted source
Mariia Rybak
grade
Preferred source (of 2)‎

The metabolic pathway of D-Tyr and editing of D-Tyr-misaminoacylated substrates in Thermus thermophilus

42nd FEBS Congress "From molecules to cells and back" (Jerusalem, Israel)
2017-09-08 | Conference abstract
Source: Self-asserted source
Mariia Rybak

Cloning, expression and purification of D-Tyr-tRNATyr-deacylase from Thermus thermophilus

Biopolymers and Cell
2015 | Journal article
EID:

2-s2.0-84939174332

Source: Self-asserted source
Mariia Rybak
grade
Preferred source (of 2)‎

Generation of monoclonal antibody against protein phosphatase 5

Biopolymers and Cell
2013 | Journal article
EID:

2-s2.0-84877099299

Contributors: Malanchuk, O.M.; Ovcharenko, G.V.; Tykhonkova, I.O.; Khoma, O.S.; Chorna, U.A.; Rybak, M.Y.; Palchevskyy, S.S.
Source: Self-asserted source
Mariia Rybak via Scopus - Elsevier

Peer review (6 reviews for 4 publications/grants)

Review activity for Journal of molecular modeling. (1)
Review activity for Journal of molecular modeling. (1)
Review activity for Nucleosides, nucleotides & nucleic acids. (2)
Review activity for Structure. (2)