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Funding (6)

Elucidating and modeling the microbial mechanism of carbon fixation

2015-05-01 to 2018-04-30 | Grant
International Human Frontier Science Program Organization (Strasbourg, FR)
URL: https://app.dimensions.ai/details/grant/grant.4900789
GRANT_NUMBER:

0417b924
Source: Self-asserted source
Yujia Alina Chan via DimensionsWizard

The characterization and modeling of microbial carbon-fixing compartments

2014-04-01 to 2015-03-31 | Grant
Natural Sciences and Engineering Research Council (Ottawa, CA)
URL: https://app.dimensions.ai/details/grant/grant.4167909
GRANT_NUMBER: 564460
Source: Self-asserted source
Yujia Alina Chan via DimensionsWizard

Investigating the Molecular Mechanism of Chromosome Instability Phenotypes in Splicing and RNA Processing Mutants

2012-04-01 to 2013-03-31 | Grant
Natural Sciences and Engineering Research Council (Ottawa, CA)
URL: https://app.dimensions.ai/details/grant/grant.2814909
GRANT_NUMBER: 501272
Source: Self-asserted source
Yujia Alina Chan via DimensionsWizard

Investigating the Molecular Mechanism of Chromosome Instability Phenotypes in Splicing and RNA Processing Mutants

2011-04-01 to 2012-03-31 | Grant
Natural Sciences and Engineering Research Council (Ottawa, CA)
URL: https://app.dimensions.ai/details/grant/grant.2866220
GRANT_NUMBER: 486603
Source: Self-asserted source
Yujia Alina Chan via DimensionsWizard

Investigating the Molecular Mechanism of Chromosome Instability Phenotypes in Splicing and RNA Processing Mutants

2010-04-01 to 2011-03-31 | Grant
Natural Sciences and Engineering Research Council (Ottawa, CA)
URL: https://app.dimensions.ai/details/grant/grant.2838834
GRANT_NUMBER: 465256
Source: Self-asserted source
Yujia Alina Chan via DimensionsWizard

Engineering an internalized microbe, salmonella for drug delivery purpose

2009-04-01 to 2010-03-31 | Grant
Natural Sciences and Engineering Research Council (Ottawa, CA)
URL: https://app.dimensions.ai/details/grant/grant.2808534
GRANT_NUMBER: 436533
Source: Self-asserted source
Yujia Alina Chan via DimensionsWizard

Works (20)

The Emergence of the Spike Furin Cleavage Site in SARS-CoV-2

Molecular Biology and Evolution
2022-01-07 | Journal article
DOI: 10.1093/molbev/msab327
Contributors: Yujia Alina Chan; Shing Hei Zhan; Sudhir Kumar
Source: check_circle
Crossref

COVID-19 CG enables SARS-CoV-2 mutation and lineage tracking by locations and dates of interest

eLife
2021-02-23 | Journal article
DOI: 10.7554/eLife.63409
Contributors: Albert Tian Chen; Kevin Altschuler; Shing Hei Zhan; Yujia Alina Chan; Benjamin E Deverman
Source: check_circle
Crossref

Systematic auditing is essential to debiasing machine learning in biology

Communications Biology
2021-02-10 | Journal article
DOI: 10.1038/s42003-021-01674-5
Contributors: Fatma-Elzahraa Eid; Haitham A. Elmarakeby; Yujia Alina Chan; Nadine Fornelos; Mahmoud ElHefnawi; Eliezer M. Van Allen; Lenwood S. Heath; Kasper Lage
Source: check_circle
Crossref

COVID-19 CG: Tracking SARS-CoV-2 mutations by locations and dates of interest

2020-09-24 | Preprint
DOI: 10.1101/2020.09.23.310565
Contributors: Albert Tian Chen; Kevin Altschuler; Shing Hei Zhan; Yujia Alina Chan; Benjamin E. Deverman
Source: check_circle
Crossref

Single source of pangolin CoVs with a near identical Spike RBD to SARS-CoV-2

2020-07-07 | Preprint
DOI: 10.1101/2020.07.07.184374
Contributors: Yujia Alina Chan; Shing Hei Zhan
Source: check_circle
Crossref

Systematic auditing is essential to debiasing machine learning in biology

2020-05-10 | Preprint
DOI: 10.1101/2020.05.08.085183
Contributors: Fatma-Elzahraa Eid; Haitham Elmarakeby; Yujia Alina Chan; Nadine Fornelos Martins; Mahmoud ElHefnawi; Eli Van Allen; Lenwood S. Heath; Kasper Lage
Source: check_circle
Crossref

SARS-CoV-2 is well adapted for humans. What does this mean for re-emergence?

2020-05-02 | Preprint
DOI: 10.1101/2020.05.01.073262
Contributors: Shing Hei Zhan; Benjamin E. Deverman; Yujia Alina Chan
Source: check_circle
Crossref

Unraveling Oxidative Stress Resistance: Molecular Properties Govern Proteome Vulnerability

2020-03 | Other
DOI: 10.1101/2020.03.09.983213
OTHER-ID:

PPR116672
Contributors: Chang RL; Stanley JA; Robinson MC; Sher JW; Li Z; Chan YA; Omdahl AR; Wattiez R; Godzik A; Matallana-Surget S
Source: Self-asserted source
Yujia Alina Chan via Europe PubMed Central

Delivering genes across the blood-brain barrier: LY6A, a novel cellular receptor for AAV-PHP.B capsids.

PloS one
2019-11 | Journal article
DOI: 10.1371/journal.pone.0225206
PMID: 31725765
PMC: PMC6855452
Contributors: Huang Q; Chan KY; Tobey IG; Chan YA; Poterba T; Boutros CL; Balazs AB; Daneman R; Bloom JM; Seed C et al.
Source: Self-asserted source
Yujia Alina Chan via Europe PubMed Central

MRE11-RAD50-NBS1 promotes Fanconi Anemia R-loop suppression at transcription-replication conflicts.

Nature communications
2019-09 | Journal article
DOI: 10.1038/s41467-019-12271-w
PMID: 31537797
PMC: PMC6753070
Contributors: Chang EY; Tsai S; Aristizabal MJ; Wells JP; Coulombe Y; Busatto FF; Chan YA; Kumar A; Dan Zhu Y; Wang AY et al.
Source: Self-asserted source
Yujia Alina Chan via Europe PubMed Central

Delivering genes across the blood-brain barrier: LY6A, a novel cellular receptor for AAV-PHP.B capsids

2019-02 | Other
DOI: 10.1101/538421
OTHER-ID:

PPR69469
Contributors: Huang Q; Chan KY; Tobey IG; Chan YA; Poterba T; Boutros CL; Balazs AB; Daneman R; Bloom JM; Seed C et al.
Source: Self-asserted source
Yujia Alina Chan via Europe PubMed Central

MRE11-RAD50-NBS1 activates Fanconi Anemia R-loop suppression at transcription-replication conflicts

2018-11 | Other
DOI: 10.1101/472654
OTHER-ID:

PPR62189
Contributors: Chang EY; Wells JP; Tsai S; Coulombe Y; Chan YA; Zhu YD; Fournier L; Hieter P; Masson J; Stirling PC
Source: Self-asserted source
Yujia Alina Chan via Europe PubMed Central

Large-scale recoding of a bacterial genome by iterative recombineering of synthetic DNA.

Nucleic acids research
2017-06 | Journal article
DOI: 10.1093/nar/gkx415
PMID: 28499033
PMC: PMC5499800
Contributors: Lau YH; Stirling F; Kuo J; Karrenbelt MAP; Chan YA; Riesselman A; Horton CA; Schäfer E; Lips D; Weinstock MT et al.
Source: Self-asserted source
Yujia Alina Chan via Europe PubMed Central

Efficient size-independent chromosome delivery from yeast to cultured cell lines.

Nucleic acids research
2017-04 | Journal article
DOI: 10.1093/nar/gkw1252
PMID: 27980064
PMC: PMC5397165
Contributors: Brown DM; Chan YA; Desai PJ; Grzesik P; Oldfield LM; Vashee S; Way JC; Silver PA; Glass JI
Source: Self-asserted source
Yujia Alina Chan via Europe PubMed Central

Rapid genome recoding by iterative recombineering of synthetic DNA

2017-03 | Other
DOI: 10.1101/115493
OTHER-ID:

PPR32450
Contributors: Lau YH; Stirling F; Kuo J; Karrenbelt MA; Chan YA; Riesselman A; Horton CA; Schaefer E; Lips D; Weinstock MT et al.
Source: Self-asserted source
Yujia Alina Chan via Europe PubMed Central

Mechanisms of genome instability induced by RNA-processing defects.

Trends in Genetics
2014-05 | Journal article
DOI: 10.1016/j.tig.2014.03.005
PMID: 24794811
PMC: PMC4039741
Contributors: Chan YA; Hieter P; Stirling PC
Source: Self-asserted source
Yujia Alina Chan via Europe PubMed Central

Genome-wide profiling of yeast DNA:RNA hybrid prone sites with DRIP-chip.

PLoS genetics
2014-04 | Journal article
DOI: 10.1371/journal.pgen.1004288
PMID: 24743342
PMC: PMC3990523
Contributors: Chan YA; Aristizabal MJ; Lu PY; Luo Z; Hamza A; Kobor MS; Stirling PC; Hieter P
Source: Self-asserted source
Yujia Alina Chan via Europe PubMed Central

From structure to systems: high-resolution, quantitative genetic analysis of RNA polymerase II.

Cell
2013-08 | Journal article
DOI: 10.1016/j.cell.2013.07.033
PMID: 23932120
PMC: PMC3932829
Contributors: Braberg H; Jin H; Moehle EA; Chan YA; Wang S; Shales M; Benschop JJ; Morris JH; Qiu C; Hu F et al.
Source: Self-asserted source
Yujia Alina Chan via Europe PubMed Central

R-loop-mediated genome instability in mRNA cleavage and polyadenylation mutants.

Genes & development
2012-01 | Journal article
DOI: 10.1101/gad.179721.111
PMID: 22279048
PMC: PMC3273840
Contributors: Stirling PC; Chan YA; Minaker SW; Aristizabal MJ; Barrett I; Sipahimalani P; Kobor MS; Hieter P
Source: Self-asserted source
Yujia Alina Chan via Europe PubMed Central

Quantitative mass spectrometry catalogues Salmonella pathogenicity island-2 effectors and identifies their cognate host binding partners.

The Journal of biological chemistry
2011-05 | Journal article
DOI: 10.1074/jbc.M111.224600
PMID: 21566117
PMC: PMC3129184
Contributors: Auweter SD; Bhavsar AP; de Hoog CL; Li Y; Chan YA; van der Heijden J; Lowden MJ; Coombes BK; Rogers LD; Stoynov N et al.
Source: Self-asserted source
Yujia Alina Chan via Europe PubMed Central

Peer review (3 reviews for 2 publications/grants)

Review activity for BMJ global health. (2)
Review activity for Communications biology. (1)
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