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Employment (2)

Salk Institute for Biological Studies: La Jolla, CA, US

2021-11-01 to present | Research Scientist (Computational Neurobiology Laboratory)
Employment
Source: Self-asserted source
Burak Kaynak

University of Pittsburgh: Pittsburgh, PA, US

2018-03-19 to 2021-11 | Research Scientist (Computational & Systems Biology)
Employment
Source: Self-asserted source
Burak Kaynak

Works (19)

ClustENMD: efficient sampling of biomolecular conformational space at atomic resolution

Bioinformatics
2021-11-05 | Journal article
Contributors: Burak T Kaynak; She Zhang; Ivet Bahar; Pemra Doruker; Lenore Cowen
Source: check_circle
Crossref

Precision druggability of a class B GPCR, the PTH type 1 receptor

The FASEB Journal
2021-05 | Journal article
Part of ISSN: 0892-6638
Part of ISSN: 1530-6860
Source: Self-asserted source
Burak Kaynak

ClustENMD: Efficient sampling of biomolecular conformational space at atomic resolution

2021-04-18 | Other
Contributors: Burak T. Kaynak; She Zhang; Ivet Bahar; Pemra Doruker
Source: check_circle
Crossref

Impact of South African 501.V2 Variant on SARS-CoV-2 Spike Infectivity and Neutralization: A Structure-based Computational Assessment

2021-01-11 | Preprint
Contributors: Mary Hongying Cheng; James M Krieger; Burak Kaynak; Moshe Arditi; Ivet Bahar
Source: check_circle
Crossref

Essential site scanning analysis: A new approach for detecting sites that modulate the dispersion of protein global motions

Computational and Structural Biotechnology Journal
2020 | Journal article
Part of ISSN: 2001-0370
Source: Self-asserted source
Burak Kaynak

State-dependent sequential allostery exhibited by chaperonin TRiC/CCT revealed by network analysis of Cryo-EM maps

Progress in Biophysics and Molecular Biology
2020-08 | Journal article
Part of ISSN: 0079-6107
Source: Self-asserted source
Burak Kaynak

Intrinsic dynamics is evolutionarily optimized to enable allosteric behavior

Current Opinion in Structural Biology
2020-06 | Journal article
Contributors: Yan Zhang; Pemra Doruker; Burak Kaynak; She Zhang; James Krieger; Hongchun Li; Ivet Bahar
Source: check_circle
Crossref

Protein–Ligand Complexes as Constrained Dynamical Systems

Journal of Chemical Information and Modeling
2019-05-28 | Journal article
Part of ISSN: 1549-9596
Part of ISSN: 1549-960X
Source: Self-asserted source
Burak Kaynak

RESPEC Incorporates Residue Specificity and the Ligand Effect into the Elastic Network Model

The Journal of Physical Chemistry B
2018-05-31 | Journal article
Part of ISSN: 1520-6106
Part of ISSN: 1520-5207
Source: Self-asserted source
Burak Kaynak

Infinitely many singular interactions on noncompact manifolds

Annals of Physics
2015-05 | Journal article
Part of ISSN: 0003-4916
Source: Self-asserted source
Burak Kaynak

Compact submanifolds supporting singular interactions

Annals of Physics
2013-12 | Journal article
Part of ISSN: 0003-4916
Source: Self-asserted source
Burak Kaynak

A Klein–Gordon particle captured by embedded curves

Annals of Physics
2012-11 | Journal article
Part of ISSN: 0003-4916
Source: Self-asserted source
Burak Kaynak

Singular interactions supported by embedded curves

Journal of Physics A: Mathematical and Theoretical
2012-07-06 | Journal article
Part of ISSN: 1751-8113
Part of ISSN: 1751-8121
Source: Self-asserted source
Burak Kaynak

The relativistic Lee model on Riemannian manifolds

Journal of Physics A: Mathematical and Theoretical
2009-06-05 | Journal article
Part of ISSN: 1751-8113
Part of ISSN: 1751-8121
Source: Self-asserted source
Burak Kaynak

Symbol calculus and zeta-function regularized determinants

Journal of Mathematical Physics
2007-11 | Journal article
Part of ISSN: 0022-2488
Part of ISSN: 1089-7658
Source: Self-asserted source
Burak Kaynak

Scalar gauge theory on a cylinder

Journal of Mathematical Physics
2006-07 | Journal article
Part of ISSN: 0022-2488
Part of ISSN: 1089-7658
Source: Self-asserted source
Burak Kaynak

String theory in the Penrose limit ofAdS2×S2spacetime

Physical Review D
2005-05-18 | Journal article
Part of ISSN: 1550-7998
Part of ISSN: 1550-2368
Source: Self-asserted source
Burak Kaynak

MULTI-BLACK HOLES SOLUTION WITH COSMIC STRINGS

International Journal of Modern Physics A
2004-04-20 | Journal article
Part of ISSN: 0217-751X
Part of ISSN: 1793-656X
Source: Self-asserted source
Burak Kaynak

Noncommutative phase and unitarization of GLp,q(2)

Journal of Mathematical Physics
2003-04 | Journal article
Part of ISSN: 0022-2488
Part of ISSN: 1089-7658
Source: Self-asserted source
Burak Kaynak

Peer review (1 review for 1 publication/grant)

Review activity for PLoS computational biology. (1)