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Scopus Author ID: 24401816100
Scopus Author ID: 35105514800

Keywords

Laboratory Automation, Bioinformatics

Countries

Japan

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Employment (1)

National Institute of Advanced Industrial Science and Technology: Koto-ku, Tokyo, JP

2016-04-01 to present | Research Team Leader (Artificial Intelligence Research Center)
Employment
Source: Self-asserted source
Toutai Mituyama

Education and qualifications (1)

Japan Advanced Institute of Science and Technology: Nomi, Ishikawa pref., JP

1998-04-01 to 2004-03-31 | Ph.D. (School of Knowledge Science)
Education
Source: Self-asserted source
Toutai Mituyama

Works (33)

Evaluation of microplate handling accuracy for applying robotic arms in laboratory automation

SLAS Technology
2024-12 | Journal article
DOI: 10.1016/j.slast.2024.100200
Contributors: Yoritaka Harazono; Haruko Shimono; Kikumi Hata; Toutai Mitsuyama; Takaaki Horinouchi
Source: check_circle
Crossref

Evaluation of Microplate Handling Accuracy for Applying Robotic Arms in Laboratory Automation

2024-01-02 | Preprint
DOI: 10.1101/2023.12.29.573685
Contributors: Yoritaka Harazono; Haruko Shimono; Kikumi Hata; Toutai Mitsuyama; Takaaki Horinouchi
Source: check_circle
Crossref

Machine learning approach for discrimination of genotypes based on bright-field cellular images

npj Systems Biology and Applications
2021-07-21 | Journal article
DOI: 10.1038/s41540-021-00190-w
Contributors: Godai Suzuki; Yutaka Saito; Motoaki Seki; Daniel Evans-Yamamoto; Mikiko Negishi; Kentaro Kakoi; Hiroki Kawai; Christian R. Landry; Nozomu Yachie; Toutai Mitsuyama
Source: check_circle
Crossref

Genome-Wide Chromatin Analysis of FFPE Tissues Using a Dual-Arm Robot with Clinical Potential

Cancers
2021-04-28 | Journal article
DOI: 10.3390/cancers13092126
Contributors: Syuzo Kaneko; Toutai Mitsuyama; Kouya Shiraishi; Noriko Ikawa; Kanto Shozu; Ai Dozen; Hidenori Machino; Ken Asada; Masaaki Komatsu; Asako Kukita et al.
Source: check_circle
Crossref
grade
Preferred source (of 3)‎

Adipose-derived mesenchymal stem cells differentiate into heterogeneous cancer-associated fibroblasts in a stroma-rich xenograft model

Scientific Reports
2021-02-25 | Journal article
DOI: 10.1038/s41598-021-84058-3
Part of ISSN: 2045-2322
Contributors: Yoshihiro Miyazaki; Tatsuya Oda; Yuki Inagaki; Hiroko Kushige; Yutaka Saito; Nobuhito Mori; Yuzo Takayama; Yutaro Kumagai; Toutai Mitsuyama; Yasuyuki S. Kida
Source: Self-asserted source
Toutai Mituyama

Comprehensive epigenome characterization reveals diverse transcriptional regulation across human vascular endothelial cells

Epigenetics & Chromatin
2019-12 | Journal article
DOI: 10.1186/s13072-019-0319-0
Part of ISSN: 1756-8935
Contributors: Ryuichiro Nakato; Youichiro Wada; Ryo Nakaki; Genta Nagae; Yuki Katou; Shuichi Tsutsumi; Natsu Nakajima; Hiroshi Fukuhara; Atsushi Iguchi; Takahide Kohro et al.
Source: Self-asserted source
Toutai Mituyama

DBTSS/DBKERO for integrated analysis of transcriptional regulation.

Nucleic acids research
2018-01 | Journal article
DOI: 10.1093/nar/gkx1001
PMID: 29126224
PMC: PMC5753362
Contributors: Suzuki A; Kawano S; Mitsuyama T; Suyama M; Kanai Y; Shirahige K; Sasaki H; Tokunaga K; Tsuchihara K; Sugano S et al.
Source: Self-asserted source
Toutai Mituyama via Europe PubMed Central

Epigenetic silencing of V(D)J recombination is a major determinant for selective differentiation of mucosal-associated invariant t cells from induced pluripotent stem cells.

2017 | Journal article
DOI: 10.1371/journal.pone.0174699
PMID: 28346544
PMC: PMC5367832
Contributors: Saito Y; Sugimoto C; Mituyama T; Wakao H
Source: Self-asserted source
Toutai Mituyama via Europe PubMed Central

The International Human Epigenome Consortium: A Blueprint for Scientific Collaboration and Discovery.

2016-11 | Journal article
DOI: 10.1016/j.cell.2016.11.007
PMID: 27863232
Contributors: Stunnenberg HG; International Human Epigenome Consortium; Hirst M
Source: Self-asserted source
Toutai Mituyama via Europe PubMed Central

Detection of differentially methylated regions from bisulfite-seq data by hidden Markov models incorporating genome-wide methylation level distributions.

2015 | Journal article
DOI: 10.1186/1471-2164-16-s12-s3
PMID: 26681544
PMC: PMC4682380
Contributors: Saito Y; Mituyama T
Source: Self-asserted source
Toutai Mituyama via Europe PubMed Central

Methylome, transcriptome, and PPAR(γ) cistrome analyses reveal two epigenetic transitions in fat cells.

2014-09 | Journal article
DOI: 10.4161/epi.29856
PMID: 25093444
PMC: PMC4169011
Contributors: Takada H; Saito Y; Mituyama T; Wei Z; Yoshihara E; Jacinto S; Downes M; Evans RM; Kida YS
Source: Self-asserted source
Toutai Mituyama via Europe PubMed Central

Bisulfighter: accurate detection of methylated cytosines and differentially methylated regions.

2014-04 | Journal article
DOI: 10.1093/nar/gkt1373
PMID: 24423865
PMC: PMC3973284
Contributors: Saito Y; Tsuji J; Mituyama T
Source: Self-asserted source
Toutai Mituyama via Europe PubMed Central

A biochemical landscape of A-to-I RNA editing in the human brain transcriptome.

2014-03 | Journal article
DOI: 10.1101/gr.162537.113
PMID: 24407955
PMC: PMC3941116
Contributors: Sakurai M; Ueda H; Yano T; Okada S; Terajima H; Mitsuyama T; Toyoda A; Fujiyama A; Kawabata H; Suzuki T
Source: Self-asserted source
Toutai Mituyama via Europe PubMed Central
grade
Preferred source (of 2)‎

Non-redundant compendium of human ncRNA genes in GeneCards.

2013-01 | Journal article
DOI: 10.1093/bioinformatics/bts676
PMID: 23172862
Contributors: Belinky F; Bahir I; Stelzer G; Zimmerman S; Rosen N; Nativ N; Dalah I; Iny Stein T; Rappaport N; Mituyama T et al.
Source: Self-asserted source
Toutai Mituyama via Europe PubMed Central

Functional RNA database

AIST Today (International Edition)
2010 | Journal article
EID:

2-s2.0-78649863996
Contributors: Mitsuyama, T.
Source: Self-asserted source
Toutai Mituyama via Scopus - Elsevier

Discovery of short pseudogenes derived from messenger RNAs.

2010-03 | Journal article
DOI: 10.1093/nar/gkp1098
PMID: 19965772
PMC: PMC2831318
Contributors: Terai G; Yoshizawa A; Okida H; Asai K; Mituyama T
Source: Self-asserted source
Toutai Mituyama via Europe PubMed Central

Transcripts of unknown function in multiple-signaling pathways involved in human stem cell differentiation.

2009-08 | Journal article
DOI: 10.1093/nar/gkp426
PMID: 19531736
PMC: PMC2731886
Contributors: Kikuchi K; Fukuda M; Ito T; Inoue M; Yokoi T; Chiku S; Mitsuyama T; Asai K; Hirose T; Aizawa Y
Source: Self-asserted source
Toutai Mituyama via Europe PubMed Central
grade
Preferred source (of 2)‎

MENepsilon/beta noncoding RNAs are essential for structural integrity of nuclear paraspeckles.

2009-02 | Journal article
DOI: 10.1073/pnas.0807899106
PMID: 19188602
PMC: PMC2650297
Contributors: Sasaki YT; Ideue T; Sano M; Mituyama T; Hirose T
Source: Self-asserted source
Toutai Mituyama via Europe PubMed Central

The Functional RNA Database 3.0: databases to support mining and annotation of functional RNAs.

2009-01 | Journal article
DOI: 10.1093/nar/gkn805
PMID: 18948287
PMC: PMC2686472
Contributors: Mituyama T; Yamada K; Hattori E; Okida H; Ono Y; Terai G; Yoshizawa A; Komori T; Asai K
Source: Self-asserted source
Toutai Mituyama via Europe PubMed Central

Characterization of endogenous human Argonautes and their miRNA partners in RNA silencing.

2008-06 | Journal article
DOI: 10.1073/pnas.0800334105
PMID: 18524951
PMC: PMC2430345
Contributors: Azuma-Mukai A; Oguri H; Mituyama T; Qian ZR; Asai K; Siomi H; Siomi MC
Source: Self-asserted source
Toutai Mituyama via Europe PubMed Central

A NON-PARAMETRIC BAYESIAN APPROACH FOR PREDICTING RNA SECONDARY STRUCTURES

Journal article
DOI: 10.1142/S0219720010004926
Source: Self-asserted source
Toutai Mituyama

A regulatory circuit for piwi by the large Maf gene traffic jam in Drosophila

Journal article
DOI: 10.1038/nature08501
Source: Self-asserted source
Toutai Mituyama

An identification of secondary structure conserved elements in mammalian syntenic regions

Conference paper
DOI: 10.1109/ISB.2011.6033182
Source: Self-asserted source
Toutai Mituyama

Biogenesis pathways of piRNAs loaded onto AGO3 in the Drosophila testis

Journal article
DOI: 10.1261/rna.2270710
Source: Self-asserted source
Toutai Mituyama

CentroidAlign: fast and accurate aligner for structured RNAs by maximizing expected sum-of-pairs score

Journal article
DOI: 10.1093/bioinformatics/btp580
Source: Self-asserted source
Toutai Mituyama

CENTROIDFOLD: a web server for RNA secondary structure prediction

Journal article
DOI: 10.1093/nar/gkp367
Source: Self-asserted source
Toutai Mituyama

Directed acyclic graph kernels for structural RNA analysis

Journal article
DOI: 10.1186/1471-2105-9-318
Source: Self-asserted source
Toutai Mituyama

Functional involvement of Tudor and dPRMT5 in the piRNA processing pathway in Drosophila germlines

Journal article
DOI: 10.1038/emboj.2009.365
Source: Self-asserted source
Toutai Mituyama

Large Scale Similarity Search for Locally Stable Secondary Structures among RNA Sequences

Journal article
DOI: 10.2197/ipsjtbio.2.36
Source: Self-asserted source
Toutai Mituyama

Prediction of Conserved Precursors of miRNAs and Their Mature Forms by Integrating Position-Specific Structural Features

Journal article
DOI: 10.1371/journal.pone.0044314
Source: Self-asserted source
Toutai Mituyama

Prediction of RNA secondary structure using generalized centroid estimators

Journal article
DOI: 10.1093/bioinformatics/btn601
Source: Self-asserted source
Toutai Mituyama

Predictions of RNA secondary structure by combining homologous sequence information

Journal article
DOI: 10.1093/bioinformatics/btp228
Source: Self-asserted source
Toutai Mituyama

Software.ncrna.org: web servers for analyses of RNA sequences

Journal article
DOI: 10.1093/nar/gkn222
Source: Self-asserted source
Toutai Mituyama
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