Personal information

DNA Structure
India

Biography

Dr. V R Yella obtained his B.Sc degree in Biotechnology, Botany and Chemistry from Andhra University, A.P, India in 2005 and M.Sc degree in Biochemistry from Andhra University, India in 2007. After that, he worked as a lecturer in Biochemistry for S.K.B.R College, Amalapuram from 2007-08. Later, he moved to Indian Institute of Science, in Bangalore, India and obtained his Ph.D. degree in Computational Biology under the guidance of Prof. Manju Bansal. In 2016, he joined as Assistant Professor in the department of biotechnology, K L University. Currently, his research work is supported by DST-SERB through early career research award.

Activities

Employment (1)

K L University: guntur, Andhrapradesh, IN

2016-07-01 to present | Assistant Professor (Biotechnology)
Employment
Source: Self-asserted source
Venkata Rajesh Yella

Education and qualifications (1)

Indian Institute of Science: Bangalore, Karnataka, IN

2008-08-01 to 2015-12-20 | PhD in Computational biology (Molecular Biophysics Unit)
Education
Source: Self-asserted source
Venkata Rajesh Yella

Funding (1)

Delineation of DNA structural features of various promoter categories in eukaryotes: an in silico approach

2018-07 to 2021 | Grant
Science and Engineering Research Board (SERB) (New Delhi - 110 070, Science and Engineering Research Board (Statutory Body Established Through an Act of Parliament : SERB Act 2008) Government of India, IN)
GRANT_NUMBER:

ECR/2017/001100

Source: Self-asserted source
Venkata Rajesh Yella

Works (23)

Comparative genomic analysis reveals distinct virulence and resistance mechanisms in 21 bacterial fish pathogens

Microbial Pathogenesis
2024-12 | Journal article
Contributors: Kaushika Olymon; Ankita Kumari; Nafeesah Kinoo; Valentina Teronpi; Venkata Rajesh Yella; Aditya Kumar
Source: check_circle
Crossref

Dissecting non-B DNA structural motifs in untranslated regions of eukaryotic genomes

Genomics & Informatics
2024-11-27 | Journal article
Contributors: Aruna Sesha Chandrika Gummadi; Divya Kumari Muppa; Venakata Rajesh Yella
Source: check_circle
Crossref

Discerning the Role of DNA Sequence, Shape, and Flexibility in Recognition by Drosophila Transcription Factors

ACS Chemical Biology
2024-07-19 | Journal article
Contributors: Smrithi Murthy; Upalabdha Dey; Kaushika Olymon; Eshan Abbas; Venkata Rajesh Yella; Aditya Kumar
Source: check_circle
Crossref

MLDSPP: Bacterial Promoter Prediction Tool Using DNA Structural Properties with Machine Learning and Explainable AI

Journal of Chemical Information and Modeling
2024-04-08 | Journal article
Contributors: Subhojit Paul; Kaushika Olymon; Gustavo Sganzerla Martinez; Sharmilee Sarkar; Venkata Rajesh Yella; Aditya Kumar
Source: check_circle
Crossref

Computational analysis on the dissemination of non-B DNA structural motifs in promoter regions of 1180 cellular genomes

Biochimie
2023-11 | Journal article
Contributors: Venkata Rajesh Yella; Akkinepally Vanaja
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

DNA structural properties of DNA binding sites for 21 transcription factors in the mycobacterial genome.

Frontiers in cellular and infection microbiology
2023-06 | Journal article
Contributors: Dey U; Olymon K; Banik A; Abbas E; Yella VR; Kumar A
Source: Self-asserted source
Venkata Rajesh Yella via Europe PubMed Central
grade
Preferred source (of 2)‎

Raw sequence and Non-B-DNA occurrence datasets

2023-05-04 | Data set | Author
SOURCE-WORK-ID:

22759073

Contributors: Venkata Rajesh Yella
Source: check_circle
figshare

Nucleic acid-based therapeutics for dermal wound healing

International Journal of Biological Macromolecules
2022-11 | Journal article
Part of ISSN: 0141-8130
Contributors: Venkata Rajesh Yella
Source: Self-asserted source
Venkata Rajesh Yella
grade
Preferred source (of 2)‎

Evolution of machine learning in biosciences: A bibliometric network analysis

Journal of Applied Biology & Biotechnology
2022-07-20 | Journal article
Part of ISSN: 2455-7005
Part of ISSN: 2347-212X
Source: Self-asserted source
Venkata Rajesh Yella
grade
Preferred source (of 2)‎

DeePromClass: Delineator for Eukaryotic Core Promoters employing Deep Neural Networks.

IEEE/ACM transactions on computational biology and bioinformatics
2022-03-30 | Journal article
Source: Self-asserted source
Venkata Rajesh Yella
grade
Preferred source (of 2)‎

Delineation of the DNA Structural Features of Eukaryotic Core Promoter Classes

ACS Omega
2022-02-22 | Journal article
Contributors: Akkinepally Vanaja; Venkata Rajesh Yella
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Analysis of nucleoid‐associated protein‐binding regions reveals DNA structural features influencing genome organization in Mycobacterium tuberculosis

FEBS Letters
2021-10 | Journal article
Contributors: Sharmilee Sarkar; Upalabdha Dey; Trust Boitumelo Khohliwe; Venkata Rajesh Yella; Aditya Kumar
Source: check_circle
Crossref
grade
Preferred source (of 2)‎

Symphony of the DNA flexibility and sequence environment orchestrates p53 binding to its responsive elements.

Gene
2021-08-08 | Journal article
Source: Self-asserted source
Venkata Rajesh Yella
grade
Preferred source (of 2)‎

G-quadruplex motifs are functionally conserved in cis-regulatory regions of pathogenic bacteria: An in-silico evaluation.

Biochimie
2021-02-03 | Journal article
Source: Self-asserted source
Venkata Rajesh Yella

Delving into Eukaryotic Origins of Replication Using DNA Structural Features

ACS Omega
2020-06-16 | Journal article
Part of ISSN: 2470-1343
Part of ISSN: 2470-1343
Source: Self-asserted source
Venkata Rajesh Yella
grade
Preferred source (of 2)‎

Strategies toward development of biodegradable hydrogels for biomedical applications

Polymer-Plastics Technology and Materials
2020-06-12 | Journal article
Part of ISSN: 2574-0881
Part of ISSN: 2574-089X
Source: Self-asserted source
Venkata Rajesh Yella
grade
Preferred source (of 2)‎

Identification of putative promoters in 48 eukaryotic genomes on the basis of DNA free energy

Scientific Reports
2018 | Journal article
EID:

2-s2.0-85044204710

Contributors: Yella, V.R.; Kumar, A.; Bansal, M.
Source: Self-asserted source
Venkata Rajesh Yella via Scopus - Elsevier
grade
Preferred source (of 2)‎

Flexibility and structure of flanking DNA impact transcription factor affinity for its core motif.

Nucleic acids research
2018-12-01 | Journal article
Source: Self-asserted source
Venkata Rajesh Yella
grade
Preferred source (of 2)‎

DNA structural features of eukaryotic TATA-containing and TATA-less promoters

FEBS Open Bio
2017 | Journal article
EID:

2-s2.0-85028239723

Contributors: Yella, V.R.; Bansal, M.
Source: Self-asserted source
Venkata Rajesh Yella via Scopus - Elsevier
grade
Preferred source (of 2)‎

DNA Structure and Promoter Engineering

Systems and Synthetic Biology
2015 | Book chapter
Part of ISBN: 9789401795135
Part of ISBN: 9789401795142
Source: Self-asserted source
Venkata Rajesh Yella
grade
Preferred source (of 2)‎

In silico Identification of Eukaryotic Promoters

Systems and Synthetic Biology
2015 | Book chapter
Part of ISBN: 9789401795135
Part of ISBN: 9789401795142
Source: Self-asserted source
Venkata Rajesh Yella
grade
Preferred source (of 2)‎

Role of DNA sequence based structural features of promoters in transcription initiation and gene expression

Current Opinion in Structural Biology
2014 | Journal article
EID:

2-s2.0-84893517434

Contributors: Bansal, M.; Kumar, A.; Yella, V.R.
Source: Self-asserted source
Venkata Rajesh Yella via Scopus - Elsevier
grade
Preferred source (of 2)‎

DNA structural features and architecture of promoter regions play a role in gene responsiveness of S. Cerevisiae

Journal of Bioinformatics and Computational Biology
2013 | Journal article
EID:

2-s2.0-84891585966

Contributors: Yella, V.R.; Bansal, M.
Source: Self-asserted source
Venkata Rajesh Yella via Scopus - Elsevier
grade
Preferred source (of 2)‎

Peer review (82 reviews for 23 publications/grants)

Review activity for Applied sciences. (5)
Review activity for Big data and cognitive computing (3)
Review activity for BioMedInformatics. (7)
Review activity for Biomolecules. (2)
Review activity for Buildings. (2)
Review activity for Diagnostics. (3)
Review activity for Electronics. (3)
Review activity for eLife (2)
Review activity for Epigenomes. (2)
Review activity for Genes. (6)
Review activity for Healthcare. (6)
Review activity for Informatics. (2)
Review activity for International journal of environmental research and public health (4)
Review activity for International journal of molecular sciences. (16)
Review activity for Journal of chemical information and modeling. (1)
Review activity for Journal of clinical medicine. (4)
Review activity for Journal of personalized medicine. (2)
Review activity for Life. (3)
Review activity for Metabolites. (2)
Review activity for NAR genomics and bioinformatics. (2)
Review activity for Nucleic acids research. (1)
Review activity for PloS one. (2)
Review activity for Sustainability. (2)