Personal information

Biophysics, Molecular Dynamics Simulations
Greece

Biography

Associate Professor, Biophysics

B.Sc.: Department of Physics of the Aristotle University of Thessaloniki/Greece
Diploma: In theoretical Biophysics from the department of Physics /Freie Universitat Berlin/Germany
Ph.D.: In Biophysics from the department of Physics /Freie Universitat Berlin/Germany
Postodoc: In the Hahn-Meitner Institut/Berlin/Germany and in the Fosrchungszentrum Julich/Germany.

Research interests: Study of the structure of biological macromolecules and of their interactions using theoretical and computational methods.

Activities

Employment (1)

University of Thessaly: Larisa, Thessaly, GR

2000-10 to present | Assoc Prof (Biochemistry & Biotechnology)
Employment
Source: Self-asserted source
Georgios Papadopoulos

Education and qualifications (3)

Freie Universität Berlin: Berlin, DE

1985-02 to 1989-05-10 | PhD (Physics)
Education
Source: Self-asserted source
Georgios Papadopoulos

Freie Universitaet Berlin: Berlin, DE

1980-10-01 to 1984-12-12 | Dipl. Physiker (Physics)
Qualification
Source: Self-asserted source
Georgios Papadopoulos

Aristotle University of Thessaloniki: Thessaloniki, Macedonia, GR

1972-10-01 to 1977-11-05 (Physics)
Education
Source: Self-asserted source
Georgios Papadopoulos

Professional activities (1)

Hellenic Society for Biochemistry and Molecular Biology: Athens, GR

Membership
Source: Self-asserted source
Georgios Papadopoulos

Works (32)

Nicotinic Cholinergic System and COVID-19: In Silico Identification of an Interaction between SARS-CoV-2 and Nicotinic Receptors with Potential Therapeutic Targeting Implications.

International journal of molecular sciences
2020-08 | Journal article
Contributors: Farsalinos K; Eliopoulos E; Leonidas DD; Papadopoulos GE; Tzartos S; Poulas K
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

Molecular Modelling and Docking Experiments Examining the Interaction between SARS-CoV-2 Spike Glycoprotein and Neuronal Nicotinic Acetylcholine Receptors

2020-05 | Other
OTHER-ID:

PPR166903

Contributors: Farsalinos K; Eliopoulos E; Leonidas D; Papadopoulos G; Tzartos S; Poulas K
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

New Chloramphenicol Derivatives from the Viewpoint of Anticancer and Antimicrobial Activity.

Antibiotics (Basel, Switzerland)
2019-01 | Journal article
Contributors: Giannopoulou PC; Missiri DA; Kournoutou GG; Sazakli E; Papadopoulos GE; Papaioannou D; Dinos GP; Athanassopoulos CM; Kalpaxis DL
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

Toward fully exploiting the therapeutic potential of marketed pharmaceuticals: the use of octreotide and chloroquine in oncology

OncoTargets and Therapy
2018-12 | Journal article
Contributors: Panagiota Papanagnou; Georgios E. Papadopoulos; Theodora Stivarou; Anastasios Pappas
Source: check_circle
Crossref

Amino acid signatures in the HLA class II peptide-binding region associated with protection/susceptibility to the severe West Nile Virus disease.

PloS one
2018-10 | Journal article
Contributors: Sarri CA; Papadopoulos GE; Papa A; Tsakris A; Pervanidou D; Baka A; Politis C; Billinis C; Hadjichristodoulou C; Mamuris Z et al.
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

Marketed drugs used for the management of hypercholesterolemia as anticancer armament.

OncoTargets and therapy
2017-09 | Journal article
Contributors: Papanagnou P; Stivarou T; Papageorgiou I; Papadopoulos GE; Pappas A
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

Evidence for disulfide bonds in SR Protein Kinase 1 (SRPK1) that are required for activity and nuclear localization.

PloS one
2017-02 | Journal article
Contributors: Koutroumani M; Papadopoulos GE; Vlassi M; Nikolakaki E; Giannakouros T
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

Frequency Dependent Non- Thermal Effects of Oscillating Electric Fields in the Microwave Region on the Properties of a Solvated Lysozyme System: A Molecular Dynamics Study

PLOS ONE
2017-01-27 | Journal article
Contributors: Stelios Floros; Bing Xu; Maria Liakopoulou-Kyriakides; Kostas Karatasos; Georgios E. Papadopoulos
Source: check_circle
Crossref

Chloramphenicol Derivatives as Antibacterial and Anticancer Agents: Historic Problems and Current Solutions.

Antibiotics (Basel, Switzerland)
2016-06 | Journal article
Contributors: Dinos GP; Athanassopoulos CM; Missiri DA; Giannopoulou PC; Vlachogiannis IA; Papadopoulos GE; Papaioannou D; Kalpaxis DL
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

Similarity Search of Flexible 3D Molecules Combining Local and Global Shape Descriptors.

IEEE/ACM transactions on computational biology and bioinformatics
2015-11 | Journal article
Contributors: Axenopoulos A; Rafailidis D; Papadopoulos G; Houstis EN; Daras P
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

Synthesis and evaluation of chloramphenicol homodimers: molecular target, antimicrobial activity, and toxicity against human cells.

PloS one
2015-08 | Journal article
Contributors: Kostopoulou ON; Magoulas GE; Papadopoulos GE; Mouzaki A; Dinos GP; Papaioannou D; Kalpaxis DL
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

Detailed study of the dielectric function of a lysozyme solution studied with molecular dynamics simulations.

European biophysics journal : EBJ
2015-06 | Journal article
Contributors: Floros S; Liakopoulou-Kyriakides M; Karatasos K; Papadopoulos GE
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

Structural properties and interaction energies affecting drug design. An approach combining molecular simulations, statistics, interaction energies and neural networks.

Computational biology and chemistry
2015-02 | Journal article
Contributors: Ioannidis D; Papadopoulos GE; Anastassopoulos G; Kortsaris A; Anagnostopoulos K
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

Conjugation with polyamines enhances the antibacterial and anticancer activity of chloramphenicol.

Nucleic acids research
2014-06 | Journal article
Contributors: Kostopoulou ON; Kouvela EC; Magoulas GE; Garnelis T; Panagoulias I; Rodi M; Papadopoulos G; Mouzaki A; Dinos GP; Papaioannou D et al.
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

Clindamycin binding to ribosomes revisited: foot printing and computational detection of two binding sites within the peptidyl transferase center.

Die Pharmazie
2013-07 | Journal article
Contributors: Kostopoulou ON; Papadopoulos G; Kouvela EC; Kalpaxis DL
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

Studies on the essential intramolecular interaction between the A1 and A2 domains of von Willebrand factor.

Protein and peptide letters
2013-02 | Journal article
Contributors: Karoulia Z; Papadopoulos G; Nomikos M; Thanassoulas A; Papadopoulou TC; Nounesis G; Kontou M; Stathopoulos C; Leonidas DD
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

SP-dock: protein-protein docking using shape and physicochemical complementarity.

IEEE/ACM transactions on computational biology and bioinformatics
2013-01 | Journal article
Contributors: Axenopoulos A; Daras P; Papadopoulos GE; Houstis EN
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

The σ-hole phenomenon of halogen atoms forms the structural basis of the strong inhibitory potency of C5 halogen substituted glucopyranosyl nucleosides towards glycogen phosphorylase b.

ChemMedChem
2012-01 | Journal article
Contributors: Kantsadi AL; Hayes JM; Manta S; Skamnaki VT; Kiritsis C; Psarra AM; Koutsogiannis Z; Dimopoulou A; Theofanous S; Nikoleousakos N et al.
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

A shape descriptor for fast complementarity matching in molecular docking.

IEEE/ACM transactions on computational biology and bioinformatics
2011-11 | Journal article
Contributors: Axenopoulos A; Daras P; Papadopoulos G; Houstis EN
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

Helicobacter pylori neutrophil activating protein as target for new drugs against H. pylori inflammation.

World journal of gastroenterology
2011-06 | Journal article
Contributors: Choli-Papadopoulou T; Kottakis F; Papadopoulos G; Pendas S
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

Dimerization of the AtoC response regulator and modelling of its binding to DNA.

Journal of molecular graphics & modelling
2010-10 | Journal article
Contributors: Papadopoulos G; Grigoroudis AI; Kyriakidis DA
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

On the intracellular trafficking of mouse S5 ribosomal protein from cytoplasm to nucleoli.

Journal of molecular biology
2009-07 | Journal article
Contributors: Matragkou Ch; Papachristou H; Karetsou Z; Papadopoulos G; Papamarcaki T; Vizirianakis IS; Tsiftsoglou AS; Choli-Papadopoulou T
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

Helicobacter pylori neutrophil-activating protein activates neutrophils by its C-terminal region even without dodecamer formation, which is a prerequisite for DNA protection--novel approaches against Helicobacter pylori inflammation.

The FEBS journal
2007-12 | Journal article
Contributors: Kottakis F; Papadopoulos G; Pappa EV; Cordopatis P; Pentas S; Choli-Papadopoulou T
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

Changes in the level of poly(Phe) synthesis in Escherichia coli ribosomes containing mutants of L4 ribosomal protein from Thermus thermophilus can be explained by structural changes in the peptidyltransferase center: a molecular dynamics simulation analysis.

European biophysics journal : EBJ
2006-06 | Journal article
Contributors: Papadopoulos G; Grudinin S; Kalpaxis DL; Choli-Papadopoulou T
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

Comparison of the blood redox status between long-distance and short-distance runners.

Physiological research
2006-01 | Journal article
Contributors: Kostaropoulos IA; Nikolaidis MG; Jamurtas AZ; Ikonomou GV; Makrygiannis V; Papadopoulos G; Kouretas D
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

Ribosomes containing mutants of L4 ribosomal protein from Thermus thermophilus display multiple defects in ribosomal functions and sensitivity against erythromycin.

RNA (New York, N.Y.)
2005-11 | Journal article
Contributors: Tsagkalia A; Leontiadou F; Xaplanteri MA; Papadopoulos G; Kalpaxis DL; Choli-Papadopoulou T
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

Critical role of residues defining the ligand binding pocket in hepatocyte nuclear factor-4alpha.

The Journal of biological chemistry
2004-04 | Journal article
Contributors: Aggelidou E; Iordanidou P; Tsantili P; Papadopoulos G; Hadzopoulou-Cladaras M
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

On the structural and functional importance of the highly conserved Glu56 of Thermus thermophilus L4 ribosomal protein.

Journal of molecular biology
2003-09 | Journal article
Contributors: Leontiadou F; Xaplanteri MA; Papadopoulos G; Gerassimou C; Kalpaxis DL; Choli-Papadopoulou T
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

Determination of the number of water molecules in the proton pathway of bacteriorhodopsin using neutron diffraction data.

European biophysics journal : EBJ
2003-03 | Journal article
Contributors: Papadopoulos G; Hauss T
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

Light- and dark-adapted bacteriorhodopsin, a time-resolved neutron diffraction study.

Biochimica et biophysica acta
1990-07 | Journal article
PMID: 2378881
Contributors: Dencher NA; Papadopoulos G; Dresselhaus D; Büldt G
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

Water molecules and exchangeable hydrogen ions at the active centre of bacteriorhodopsin localized by neutron diffraction. Elements of the proton pathway?

Journal of molecular biology
1990-07 | Journal article
PMID: 2164582
Contributors: Papadopoulos G; Dencher NA; Zaccai G; Büldt G
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central

Structure-function relationship of the light-driven proton pump bacteriorhodopsin.

Journal of protein chemistry
1989-06 | Journal article
PMID: 2789679
Contributors: Dencher NA; Choli T; Dresselhaus D; Fimmel F; Grzesiek S; Papadopoulos G; Wittmann-Liebold B; Büldt G
Source: Self-asserted source
Georgios Papadopoulos via Europe PubMed Central