Personal information

Emails & domains

Verified email addresses

Verified email domains

Websites & social links

Fediverse (Mastodon)
Common Workflow Language
Pronouns: he/him
ImpactStory
Google Scholar
Twitter (dormant)

Keywords

sciworkflows, commonwl, cwl

Countries

Germany

Biography

Common Workflow Language co-founder & CWL Project Lead. Software Carpentry instructor and Debian Developer (biomedical team). Open Science Workstyle advocate. Member of ELIXIR Germany; contributor to the BioCompute Object project; and promoter of the ResearchObject.org standards.

Citizen of the USA; Berlin, Germany is home (2019-03 onwards)

Activities

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Employment (10)

Forschungszentrum Jülich: Jülich, DE

2022-04-01 to 2024-03-31 | Community Officer (ELIXIR Germany)
Employment
Source: Self-asserted source
Michael R. Crusoe

Vrije Universiteit Amsterdam: Amsterdam, Noord-Holland, NL

2020-01-01 to 2023-12-31 | PhD Student (Promovendus) (Computer Science: Computer Systems & Bioinformatics)
Employment
Source: Self-asserted source
Michael R. Crusoe

Stichting DTL Projects: Utrecht, NL

2020-05-01 to 2023-04-30 | Project Leader Compute Platform in ELIXIR-NL
Employment
Source: Self-asserted source
Michael R. Crusoe

Curii Corporation: Somerville, MA, US

2020-01-01 to 2022-03-31 | Part-time Consultant
Employment
Source: Self-asserted source
Michael R. Crusoe

DNAnexus Inc: Mountain View, CA, US

2020-06-18 to 2022-02-28 | Part-time Consultant
Employment
Source: Self-asserted source
Michael R. Crusoe

Eberhard Karls Universität Tübingen Mathematisch-Naturwissenschaftliche Fakultät (University of Tübingen, Faculty of Mathematics and Natural Sciences): Tübingen, Baden-Württemberg, DE

2020-11-01 to 2021-12-31 | CIBI-ELIXIR Liaison and Workflow Interoperability Leader (Fachbereich Informatik (Department of Computer Science))
Employment
Source: Self-asserted source
Michael R. Crusoe

Octiog, Inc.: Las Vegas, Nevada, US

2016-05-27 to 2020-05-28 | CEO
Employment
Source: Self-asserted source
Michael R. Crusoe

VšĮ "Darbo eigos": Vilnius, LT

2017-09-22 to 2019-05-28 | Direktorius
Employment
Source: Self-asserted source
Michael R. Crusoe

University of California, Davis: Davis, California, US

2015-06-01 to 2016-03-31 | Software Engineer & Bioinformatician (Population Health & Reproduction)
Employment
Source: Self-asserted source
Michael R. Crusoe

Michigan State University: East Lansing, MI, US

2013-06-01 to 2015-05-31 | Software Engineer and Bioinformatician (Microbiology & Molecular Genetics)
Employment
Source: Self-asserted source
Michael R. Crusoe

Education and qualifications (2)

Vrije Universiteit Amsterdam: Amsterdam, Noord-Holland, NL

2020-01-01 to 2023-12-31 (Computer Science: Computer Systems & Bioinformatics)
Education
Source: Self-asserted source
Michael R. Crusoe

Arizona State University: Tempe, AZ, US

2016-12-12 | Bachelor of Science (Microbiology)
Education
Source: Self-asserted source
Michael R. Crusoe

Professional activities (3)

Open Bioinformatics Foundation: New York, NY, US

2014 to present
Membership
Source: Self-asserted source
Michael R. Crusoe

IEEE Standards Association: Piscataway, New Jersey, US

2018-05 to 2020-10-31
Membership
Source: Self-asserted source
Michael R. Crusoe

IEEE Standards Association: Piscataway, New Jersey, US

2018-06-30 to 2020-05-08 | Vice Chair, Open Source Committee
Service
Source: Self-asserted source
Michael R. Crusoe

Funding (10)

Lowering the technical barriers to COVID-19 analysis/research computing

2020-04 to 2021-04 | Grant
SURFsara (Amsterdam, NL)
GRANT_NUMBER:

EINF-290
Source: Self-asserted source
Michael R. Crusoe

Modular data reduction on pipelines for astronomy data

2019-01 to 2019-04 | Award
European Commission (Brussels, BE)
Part of GRANT_NUMBER: 653477
Source: Self-asserted source
Michael R. Crusoe

Support for the Common Workflow Language project

2018-03 to 2022-03 | Contract
Curoverse Innovations, Inc. d/b/a Curoverse Research (Somerville, Massachusetts, US)
Source: Self-asserted source
Michael R. Crusoe

ELIXIR Interoperability Platform Implementation Study: “Enabling the reuse, extension, scaling, and reproducibility of scientific workflows”

Source: Self-asserted source
Michael R. Crusoe

CWL support in REANA

2017-08 to 2017-10 | Contract
New York University (NY, NY, US)
Source: Self-asserted source
Michael R. Crusoe

CWL / MG-RAST / AWE

2017-07 to 2017-08 | Contract
University of Chicago (IL, IL, US)
Source: Self-asserted source
Michael R. Crusoe

The European Open Science Cloud for Research Pilot Project.

2017-06-01 to 2019-03-31 | Grant
European Commission (Brussels, BE)
GRANT_NUMBER: grant.739563
Source: Self-asserted source
Michael R. Crusoe

EBI metagenomics CWL refactoring; CWL user training

2017-04 to 2017-07 | Contract
European Molecular Biology Organization (Heidelberg, DE)
URL: https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl
Source: Self-asserted source
Michael R. Crusoe

Common Workflow Language

2016-04 to 2017-03 | Contract
Seven Bridges Genomics (Cambridge, Massachusetts, US)
URL: http://mrc.commonwl.org/renewal.html
Source: Self-asserted source
Michael R. Crusoe

Common Workflow Language

2015-10 to 2016-04 | Award
Seven Bridges Genomics (Cambridge, Massachusetts, US)
URL: http://mrc.commonwl.org/introduction.html#funding
Source: Self-asserted source
Michael R. Crusoe
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